RNA–Protein interactions for RNA: ENST00000368985.7

CTSS-201, Transcript of cathepsin S, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTSS, Length 4,107 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSS-201ENST00000368985 FAM160B2Q86V87 743 aa5.46□□□□□ -1.54
CTSS-201ENST00000368985 SPICE1Q8N0Z3 855 aa5.46□□□□□ -1.54
CTSS-201ENST00000368985 LRRC47Q8N1G4 583 aaKnown RBP5.46□□□□□ -1.54
CTSS-201ENST00000368985 DSCC1Q9BVC3 393 aa5.46□□□□□ -1.54
CTSS-201ENST00000368985 FRMD4AQ9P2Q2 1039 aaPredicted RBP5.46□□□□□ -1.54
CTSS-201ENST00000368985 SIP14410 1827 aa5.46□□□□□ -1.54
CTSS-201ENST00000368985 TNKSO95271 1327 aa5.46□□□□□ -1.54
CTSS-201ENST00000368985 DOCK3Q8IZD9 2030 aa5.46□□□□□ -1.54
CTSS-201ENST00000368985 KIAA0355O15063 1070 aa5.46□□□□□ -1.54
CTSS-201ENST00000368985 CABYRO75952 493 aa5.46□□□□□ -1.54
CTSS-201ENST00000368985 FLT3LGP49771 235 aa5.46□□□□□ -1.54
CTSS-201ENST00000368985 METAP2P50579 478 aaKnown RBP eCLIP5.46□□□□□ -1.54
CTSS-201ENST00000368985 PDE4BQ07343 736 aa5.46□□□□□ -1.54
CTSS-201ENST00000368985 ZRSR1Q15695 479 aaKnown RBP5.46□□□□□ -1.54
CTSS-201ENST00000368985 CCDC96Q2M329 555 aa5.46□□□□□ -1.54
CTSS-201ENST00000368985 AKNAD1Q5T1N1 836 aa5.46□□□□□ -1.54
CTSS-201ENST00000368985 RASIP1Q5U651 963 aa5.46□□□□□ -1.54
CTSS-201ENST00000368985 ANKRD33Q7Z3H0 272 aa5.46□□□□□ -1.54
CTSS-201ENST00000368985 ESR2Q92731 530 aa5.46□□□□□ -1.54
CTSS-201ENST00000368985 TNPO1Q92973 898 aaKnown RBP5.46□□□□□ -1.54
CTSS-201ENST00000368985 AIFM3Q96NN9 605 aa5.46□□□□□ -1.54
CTSS-201ENST00000368985 NBPF3Q9H094 633 aa5.46□□□□□ -1.54
CTSS-201ENST00000368985 DDX20Q9UHI6 824 aaKnown RBP5.46□□□□□ -1.54
CTSS-201ENST00000368985 FEM1BQ9UK73 627 aa5.46□□□□□ -1.54
CTSS-201ENST00000368985 DDX52Q9Y2R4 599 aaKnown RBP eCLIP5.46□□□□□ -1.54
CTSS-201ENST00000368985 VCAM1P19320 739 aa5.46□□□□□ -1.54
CTSS-201ENST00000368985 IRX3P78415 501 aaPredicted RBP5.46□□□□□ -1.54
CTSS-201ENST00000368985 CERKLQ49MI3 558 aaPredicted RBP5.46□□□□□ -1.54
CTSS-201ENST00000368985 CPLX2Q6PUV4 134 aaKnown RBP5.46□□□□□ -1.54
CTSS-201ENST00000368985 ZSCAN21Q9Y5A6 473 aaPredicted RBP5.46□□□□□ -1.54
CTSS-201ENST00000368985 CACNA1GO43497 2377 aa5.45□□□□□ -1.54
CTSS-201ENST00000368985 GBF1Q92538 1859 aa5.45□□□□□ -1.54
CTSS-201ENST00000368985 ZBTB43O43298 467 aa5.45□□□□□ -1.54
CTSS-201ENST00000368985 FMNL1O95466 1100 aaPredicted RBP5.45□□□□□ -1.54
CTSS-201ENST00000368985 POU3F3P20264 500 aaPredicted RBP5.45□□□□□ -1.54
CTSS-201ENST00000368985 SHROOM1Q2M3G4 852 aaPredicted RBP5.45□□□□□ -1.54
CTSS-201ENST00000368985 GADL1Q6ZQY3 521 aa5.45□□□□□ -1.54
CTSS-201ENST00000368985 HS6ST3Q8IZP7 471 aa5.45□□□□□ -1.54
CTSS-201ENST00000368985 ARRDC4Q8NCT1 418 aa5.45□□□□□ -1.54
CTSS-201ENST00000368985 KLHDC9Q8NEP7 349 aa5.45□□□□□ -1.54
CTSS-201ENST00000368985 RNF25Q96BH1 459 aaPredicted RBP5.45□□□□□ -1.54
CTSS-201ENST00000368985 ORC3Q9UBD5 711 aaPredicted RBP5.45□□□□□ -1.54
CTSS-201ENST00000368985 CPA4Q9UI42 421 aa5.45□□□□□ -1.54
CTSS-201ENST00000368985 DDX49Q9Y6V7 483 aaKnown RBP5.45□□□□□ -1.54
CTSS-201ENST00000368985 PFASO15067 1338 aa5.45□□□□□ -1.54
CTSS-201ENST00000368985 ELP1O95163 1332 aa5.45□□□□□ -1.54
CTSS-201ENST00000368985 SEPT4O43236 478 aa5.45□□□□□ -1.54
CTSS-201ENST00000368985 RFC2P35250 354 aa5.45□□□□□ -1.54
CTSS-201ENST00000368985 ANAPC15P60006 121 aa5.45□□□□□ -1.54
CTSS-201ENST00000368985 CTR9Q6PD62 1173 aa5.45□□□□□ -1.54
CTSS-201ENST00000368985 POTEEQ6S8J3 1075 aa5.45□□□□□ -1.54
CTSS-201ENST00000368985 PLCD3Q8N3E9 789 aa5.45□□□□□ -1.54
CTSS-201ENST00000368985 DCAF4Q8WV16 495 aa5.45□□□□□ -1.54
CTSS-201ENST00000368985 ZSWIM6Q9HCJ5 1215 aa5.45□□□□□ -1.54
CTSS-201ENST00000368985 GPCPD1Q9NPB8 672 aa5.45□□□□□ -1.54
CTSS-201ENST00000368985 PPP1R9AQ9ULJ8 1098 aa5.45□□□□□ -1.54
CTSS-201ENST00000368985 GABRQQ9UN88 632 aa5.45□□□□□ -1.54
CTSS-201ENST00000368985 STXBP5LQ9Y2K9 1186 aa5.45□□□□□ -1.54
CTSS-201ENST00000368985 NKRFO15226 690 aaKnown RBP eCLIP5.45□□□□□ -1.54
CTSS-201ENST00000368985 EN2P19622 333 aaPredicted RBP5.45□□□□□ -1.54
CTSS-201ENST00000368985 MKRN3Q13064 507 aaKnown RBP5.45□□□□□ -1.54
CTSS-201ENST00000368985 CCDC174Q6PII3 467 aa5.45□□□□□ -1.54
CTSS-201ENST00000368985 TRIB2Q92519 343 aa5.45□□□□□ -1.54
CTSS-201ENST00000368985 ANP32EQ9BTT0 268 aa5.45□□□□□ -1.54
CTSS-201ENST00000368985 UNC93B1Q9H1C4 597 aa5.45□□□□□ -1.54
CTSS-201ENST00000368985 RNF41Q9H4P4 317 aaPredicted RBP5.45□□□□□ -1.54
CTSS-201ENST00000368985 FRMPD2Q68DX3 1309 aaPredicted RBP5.45□□□□□ -1.54
CTSS-201ENST00000368985 PTPRSQ13332 1948 aa5.45□□□□□ -1.54
CTSS-201ENST00000368985 PTPDC1A2A3K4 754 aa5.44□□□□□ -1.54
CTSS-201ENST00000368985 TNRC18O15417 2968 aaPredicted RBP5.44□□□□□ -1.54
CTSS-201ENST00000368985 PARNO95453 639 aaKnown RBP5.44□□□□□ -1.54
CTSS-201ENST00000368985 PFKMP08237 780 aa5.44□□□□□ -1.54
CTSS-201ENST00000368985 SNAP25P60880 206 aa5.44□□□□□ -1.54
CTSS-201ENST00000368985 SCRN1Q12765 414 aa5.44□□□□□ -1.54
CTSS-201ENST00000368985 MTMR2Q13614 643 aa5.44□□□□□ -1.54
CTSS-201ENST00000368985 TOB2Q14106 344 aaPredicted RBP5.44□□□□□ -1.54
CTSS-201ENST00000368985 ANKRD1Q15327 319 aa5.44□□□□□ -1.54
CTSS-201ENST00000368985 SF3A1Q15459 793 aaKnown RBP5.44□□□□□ -1.54
CTSS-201ENST00000368985 CCSAPQ6IQ19 270 aaPredicted RBP5.44□□□□□ -1.54
CTSS-201ENST00000368985 TRMT1LQ7Z2T5 733 aaKnown RBP5.44□□□□□ -1.54
CTSS-201ENST00000368985 SESTD1Q86VW0 696 aa5.44□□□□□ -1.54
CTSS-201ENST00000368985 NEDD1Q8NHV4 660 aa5.44□□□□□ -1.54
CTSS-201ENST00000368985 GBP4Q96PP9 640 aa5.44□□□□□ -1.54
CTSS-201ENST00000368985 MAP3K14Q99558 947 aa5.44□□□□□ -1.54
CTSS-201ENST00000368985 P2RX7Q99572 595 aaKnown RBP5.44□□□□□ -1.54
CTSS-201ENST00000368985 FEZ1Q99689 392 aa5.44□□□□□ -1.54
CTSS-201ENST00000368985 UBA5Q9GZZ9 404 aa5.44□□□□□ -1.54
CTSS-201ENST00000368985 KAT14Q9H8E8 782 aa5.44□□□□□ -1.54
CTSS-201ENST00000368985 BRPF3Q9ULD4 1205 aa5.44□□□□□ -1.54
CTSS-201ENST00000368985 GTPBP6O43824 516 aaPredicted RBP5.44□□□□□ -1.54
CTSS-201ENST00000368985 KPNA6O60684 536 aa5.44□□□□□ -1.54
CTSS-201ENST00000368985 MCM2P49736 904 aa5.44□□□□□ -1.54
CTSS-201ENST00000368985 SPP2Q13103 211 aa5.44□□□□□ -1.54
CTSS-201ENST00000368985 TRIM29Q14134 588 aa5.44□□□□□ -1.54
CTSS-201ENST00000368985 SMCR8Q8TEV9 937 aaPredicted RBP5.44□□□□□ -1.54
CTSS-201ENST00000368985 TTC14Q96N46 770 aa5.44□□□□□ -1.54
CTSS-201ENST00000368985 SPATC1LQ9H0A9 340 aa5.44□□□□□ -1.54
CTSS-201ENST00000368985 CLIP2Q9UDT6 1046 aa5.44□□□□□ -1.54
CTSS-201ENST00000368985 FRMPD4Q14CM0 1322 aa5.44□□□□□ -1.54
CTSS-201ENST00000368985 FOXP2O15409 715 aa5.44□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms