RNA–Protein interactions for RNA: ENST00000360001.10

SDF4-202, Transcript of stromal cell derived factor 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SDF4, Length 1,956 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-202ENST00000360001 MCM7P33993 719 aa26.44■■□□□ 1.82
SDF4-202ENST00000360001 HMGCS2P54868 508 aa26.44■■□□□ 1.82
SDF4-202ENST00000360001 ATP2C1P98194 919 aaPredicted RBP26.44■■□□□ 1.82
SDF4-202ENST00000360001 GRIN1Q05586 938 aa26.44■■□□□ 1.82
SDF4-202ENST00000360001 PTGDRQ13258 359 aa26.44■■□□□ 1.82
SDF4-202ENST00000360001 CCDC174Q6PII3 467 aa26.44■■□□□ 1.82
SDF4-202ENST00000360001 TBCKQ8TEA7 893 aa26.44■■□□□ 1.82
SDF4-202ENST00000360001 SAMD1Q6SPF0 538 aaPredicted RBP26.43■■□□□ 1.82
SDF4-202ENST00000360001 MOB2Q70IA6 237 aa26.43■■□□□ 1.82
SDF4-202ENST00000360001 CLEC11AQ9Y240 323 aa26.43■■□□□ 1.82
SDF4-202ENST00000360001 PARP14Q460N5 1801 aa26.42■■□□□ 1.82
SDF4-202ENST00000360001 OPLAHO14841 1288 aa26.42■■□□□ 1.82
SDF4-202ENST00000360001 NDUFA8P51970 172 aa26.42■■□□□ 1.82
SDF4-202ENST00000360001 TRAF1Q13077 416 aa26.42■■□□□ 1.82
SDF4-202ENST00000360001 MAP3K11Q16584 847 aa26.42■■□□□ 1.82
SDF4-202ENST00000360001 RESP18Q5W5W9 173 aa26.42■■□□□ 1.82
SDF4-202ENST00000360001 FMR1NBQ8N0W7 255 aaPredicted RBP26.42■■□□□ 1.82
SDF4-202ENST00000360001 C4orf32Q8N8J7 132 aa26.42■■□□□ 1.82
SDF4-202ENST00000360001 USP17L15C9J2P7 530 aa26.42■■□□□ 1.82
SDF4-202ENST00000360001 USP17L13C9JLJ4 530 aa26.42■■□□□ 1.82
SDF4-202ENST00000360001 USP17L11C9JVI0 530 aa26.42■■□□□ 1.82
SDF4-202ENST00000360001 USP17L18D6R9N7 530 aa26.42■■□□□ 1.82
SDF4-202ENST00000360001 USP17L22D6RA61 530 aa26.42■■□□□ 1.82
SDF4-202ENST00000360001 USP17L17D6RBQ6 530 aa26.42■■□□□ 1.82
SDF4-202ENST00000360001 USP17L19D6RCP7 530 aa26.42■■□□□ 1.82
SDF4-202ENST00000360001 USP17L20D6RJB6 530 aa26.42■■□□□ 1.82
SDF4-202ENST00000360001 MEIS2O14770 477 aa26.42■■□□□ 1.82
SDF4-202ENST00000360001 USP17L24Q0WX57 530 aa26.42■■□□□ 1.82
SDF4-202ENST00000360001 USP17L6PQ6QN14 398 aa26.42■■□□□ 1.82
SDF4-202ENST00000360001 NEK8Q86SG6 692 aa26.42■■□□□ 1.82
SDF4-202ENST00000360001 NUP62CLQ9H1M0 184 aa26.42■■□□□ 1.82
SDF4-202ENST00000360001 ZNF579Q8NAF0 562 aaKnown RBP26.41■■□□□ 1.82
SDF4-202ENST00000360001 CNKSR2Q8WXI2 1034 aa26.41■■□□□ 1.82
SDF4-202ENST00000360001 CLSTN2Q9H4D0 955 aa26.41■■□□□ 1.82
SDF4-202ENST00000360001 PPP1R9AQ9ULJ8 1098 aa26.41■■□□□ 1.82
SDF4-202ENST00000360001 FAM237AA0A1B0GTK4 181 aa26.4■■□□□ 1.82
SDF4-202ENST00000360001 FLOT1O75955 427 aa26.4■■□□□ 1.82
SDF4-202ENST00000360001 PFKFB1P16118 471 aa26.4■■□□□ 1.82
SDF4-202ENST00000360001 MAP1SQ66K74 1059 aaPredicted RBP26.4■■□□□ 1.82
SDF4-202ENST00000360001 ANKRD13AQ8IZ07 590 aa26.4■■□□□ 1.82
SDF4-202ENST00000360001 RRAGCQ9HB90 399 aa26.4■■□□□ 1.82
SDF4-202ENST00000360001 HPSEQ9Y251 543 aa26.4■■□□□ 1.82
SDF4-202ENST00000360001 PTPRFP10586 1907 aa26.4■■□□□ 1.82
SDF4-202ENST00000360001 LETM2Q2VYF4 491 aa26.4■■□□□ 1.82
SDF4-202ENST00000360001 SH3D19Q5HYK7 790 aa26.4■■□□□ 1.82
SDF4-202ENST00000360001 GAS2L3Q86XJ1 694 aa26.4■■□□□ 1.82
SDF4-202ENST00000360001 RBM46Q8TBY0 533 aaKnown RBP26.4■■□□□ 1.82
SDF4-202ENST00000360001 FERMT2Q96AC1 680 aa26.4■■□□□ 1.82
SDF4-202ENST00000360001 CLMNQ96JQ2 1002 aa26.4■■□□□ 1.82
SDF4-202ENST00000360001 ZNF536O15090 1300 aa26.4■■□□□ 1.82
SDF4-202ENST00000360001 EDIL3O43854 480 aa26.39■■□□□ 1.82
SDF4-202ENST00000360001 LETM1O95202 739 aaPredicted RBP26.39■■□□□ 1.82
SDF4-202ENST00000360001 TTLL12Q14166 644 aaPredicted RBP26.39■■□□□ 1.82
SDF4-202ENST00000360001 ELP3Q9H9T3 547 aa26.39■■□□□ 1.82
SDF4-202ENST00000360001 SLC38A10Q9HBR0 1119 aa26.39■■□□□ 1.82
SDF4-202ENST00000360001 ZBTB4Q9P1Z0 1013 aaPredicted RBP26.39■■□□□ 1.82
SDF4-202ENST00000360001 RLFQ13129 1914 aa26.39■■□□□ 1.82
SDF4-202ENST00000360001 LDHDQ86WU2 507 aa26.38■■□□□ 1.81
SDF4-202ENST00000360001 CSRNP2Q9H175 543 aa26.38■■□□□ 1.81
SDF4-202ENST00000360001 TMOD4Q9NZQ9 345 aa26.38■■□□□ 1.81
SDF4-202ENST00000360001 ICAM1P05362 532 aa26.38■■□□□ 1.81
SDF4-202ENST00000360001 CAMK4Q16566 473 aa26.38■■□□□ 1.81
SDF4-202ENST00000360001 SPECC1Q5M775 1068 aa26.38■■□□□ 1.81
SDF4-202ENST00000360001 LRSAM1Q6UWE0 723 aa26.38■■□□□ 1.81
SDF4-202ENST00000360001 P2RX7Q99572 595 aaKnown RBP26.38■■□□□ 1.81
SDF4-202ENST00000360001 MYH7BA7E2Y1 1941 aa26.37■■□□□ 1.81
SDF4-202ENST00000360001 CCNT1O60563 726 aaKnown RBP26.37■■□□□ 1.81
SDF4-202ENST00000360001 ARL6IP4Q66PJ3 421 aaKnown RBP26.37■■□□□ 1.81
SDF4-202ENST00000360001 TMEM60Q9H2L4 133 aa26.37■■□□□ 1.81
SDF4-202ENST00000360001 FSD2A1L4K1 749 aa26.37■■□□□ 1.81
SDF4-202ENST00000360001 TRAF5O00463 557 aa26.37■■□□□ 1.81
SDF4-202ENST00000360001 KINO60870 393 aaKnown RBP26.37■■□□□ 1.81
SDF4-202ENST00000360001 AP3B2Q13367 1082 aa26.37■■□□□ 1.81
SDF4-202ENST00000360001 ARMC9Q7Z3E5 817 aa26.37■■□□□ 1.81
SDF4-202ENST00000360001 AGBL1Q96MI9 1066 aa26.37■■□□□ 1.81
SDF4-202ENST00000360001 TNMDQ9H2S6 317 aa26.37■■□□□ 1.81
SDF4-202ENST00000360001 ABCB11O95342 1321 aa26.36■■□□□ 1.81
SDF4-202ENST00000360001 PIK3CDO00329 1044 aa26.36■■□□□ 1.81
SDF4-202ENST00000360001 PPATQ06203 517 aa26.36■■□□□ 1.81
SDF4-202ENST00000360001 ORC2Q13416 577 aaPredicted RBP26.36■■□□□ 1.81
SDF4-202ENST00000360001 IL17AQ16552 155 aa26.36■■□□□ 1.81
SDF4-202ENST00000360001 MCTP2Q6DN12 878 aa26.36■■□□□ 1.81
SDF4-202ENST00000360001 ERO1BQ86YB8 467 aa26.36■■□□□ 1.81
SDF4-202ENST00000360001 TEX2Q8IWB9 1127 aa26.36■■□□□ 1.81
SDF4-202ENST00000360001 ANO3Q9BYT9 981 aa26.36■■□□□ 1.81
SDF4-202ENST00000360001 MRPL11Q9Y3B7 192 aaKnown RBP26.36■■□□□ 1.81
SDF4-202ENST00000360001 SPDYE5A6NIY4 337 aa26.35■■□□□ 1.81
SDF4-202ENST00000360001 FMR1Q06787 632 aaKnown RBP eCLIP26.35■■□□□ 1.81
SDF4-202ENST00000360001 RBM43Q6ZSC3 357 aaKnown RBP26.35■■□□□ 1.81
SDF4-202ENST00000360001 CCPG1Q9ULG6 757 aa26.35■■□□□ 1.81
SDF4-202ENST00000360001 VWA3AA6NCI4 1184 aa26.35■■□□□ 1.81
SDF4-202ENST00000360001 LAD1O00515 517 aa26.35■■□□□ 1.81
SDF4-202ENST00000360001 ZNF202O95125 648 aa26.35■■□□□ 1.81
SDF4-202ENST00000360001 CATSPERGQ6ZRH7 1159 aa26.35■■□□□ 1.81
SDF4-202ENST00000360001 ATG4CQ96DT6 458 aa26.35■■□□□ 1.81
SDF4-202ENST00000360001 OTUD5Q96G74 571 aa26.35■■□□□ 1.81
SDF4-202ENST00000360001 VWA5AO00534 786 aa26.34■■□□□ 1.81
SDF4-202ENST00000360001 IRF6O14896 467 aa26.34■■□□□ 1.81
SDF4-202ENST00000360001 NEMFO60524 1076 aa26.34■■□□□ 1.81
SDF4-202ENST00000360001 FDX1P10109 184 aa26.34■■□□□ 1.81
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms