RNA–Protein interactions for RNA: ENST00000359759.8

COL18A1-203, Transcript of collagen type XVIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL18A1, Length 6,586 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-203ENST00000359759 CCDC138Q96M89 665 aa17.5■□□□□ 0.39
COL18A1-203ENST00000359759 USP28Q96RU2 1077 aa17.5■□□□□ 0.39
COL18A1-203ENST00000359759 LZTS2Q9BRK4 669 aa17.5■□□□□ 0.39
COL18A1-203ENST00000359759 TMOD1P28289 359 aa17.5■□□□□ 0.39
COL18A1-203ENST00000359759 ORC6Q9Y5N6 252 aa17.5■□□□□ 0.39
COL18A1-203ENST00000359759 SLCO1A2P46721 670 aa17.5■□□□□ 0.39
COL18A1-203ENST00000359759 MYSM1Q5VVJ2 828 aa17.5■□□□□ 0.39
COL18A1-203ENST00000359759 GPT2Q8TD30 523 aa17.5■□□□□ 0.39
COL18A1-203ENST00000359759 DISC1Q9NRI5 854 aa17.5■□□□□ 0.39
COL18A1-203ENST00000359759 ARMCX3Q9UH62 379 aaPredicted RBP17.5■□□□□ 0.39
COL18A1-203ENST00000359759 IBTKQ9P2D0 1353 aaPredicted RBP17.49■□□□□ 0.39
COL18A1-203ENST00000359759 HOXC9P31274 260 aa17.49■□□□□ 0.39
COL18A1-203ENST00000359759 ZNF654Q8IZM8 581 aa17.49■□□□□ 0.39
COL18A1-203ENST00000359759 EPB41L5Q9HCM4 733 aa17.49■□□□□ 0.39
COL18A1-203ENST00000359759 DDX25Q9UHL0 483 aaKnown RBP17.49■□□□□ 0.39
COL18A1-203ENST00000359759 MLXIPQ9HAP2 919 aa17.49■□□□□ 0.39
COL18A1-203ENST00000359759 MED4Q9NPJ6 270 aa17.49■□□□□ 0.39
COL18A1-203ENST00000359759 ANAPC5Q9UJX4 755 aa17.49■□□□□ 0.39
COL18A1-203ENST00000359759 HMGXB3Q12766 1538 aa17.49■□□□□ 0.39
COL18A1-203ENST00000359759 NVLO15381 856 aaKnown RBP17.49■□□□□ 0.39
COL18A1-203ENST00000359759 PAGR1Q9BTK6 254 aa17.49■□□□□ 0.39
COL18A1-203ENST00000359759 RIMS2Q9UQ26 1411 aa17.49■□□□□ 0.39
COL18A1-203ENST00000359759 LPXNO60711 386 aa17.49■□□□□ 0.39
COL18A1-203ENST00000359759 PRPSAP1Q14558 356 aa17.49■□□□□ 0.39
COL18A1-203ENST00000359759 BLIDQ8IZY5 108 aa17.49■□□□□ 0.39
COL18A1-203ENST00000359759 JPH2Q9BR39 696 aaPredicted RBP17.49■□□□□ 0.39
COL18A1-203ENST00000359759 SCHIP1Q9P0W5 487 aaPredicted RBP17.49■□□□□ 0.39
COL18A1-203ENST00000359759 THEGQ9P2T0 379 aa17.49■□□□□ 0.39
COL18A1-203ENST00000359759 ATP8A1Q9Y2Q0 1164 aa17.49■□□□□ 0.39
COL18A1-203ENST00000359759 USP19O94966 1318 aa17.49■□□□□ 0.39
COL18A1-203ENST00000359759 SPDYE2BA6NHP3 402 aa17.49■□□□□ 0.39
COL18A1-203ENST00000359759 A6NJR5 290 aa17.49■□□□□ 0.39
COL18A1-203ENST00000359759 SPDYE6P0CI01 402 aa17.49■□□□□ 0.39
COL18A1-203ENST00000359759 ADAM9Q13443 819 aa17.49■□□□□ 0.39
COL18A1-203ENST00000359759 TAF11Q15544 211 aa17.49■□□□□ 0.39
COL18A1-203ENST00000359759 TRMT10CQ7L0Y3 403 aaKnown RBP17.49■□□□□ 0.39
COL18A1-203ENST00000359759 LRRC47Q8N1G4 583 aaKnown RBP17.49■□□□□ 0.39
COL18A1-203ENST00000359759 RNF217Q8TC41 542 aa17.49■□□□□ 0.39
COL18A1-203ENST00000359759 CFAP36Q96G28 342 aa17.49■□□□□ 0.39
COL18A1-203ENST00000359759 TOP2BQ02880 1626 aa17.49■□□□□ 0.39
COL18A1-203ENST00000359759 IQGAP2Q13576 1575 aa17.48■□□□□ 0.39
COL18A1-203ENST00000359759 DNAJC8O75937 253 aaPredicted RBP17.48■□□□□ 0.39
COL18A1-203ENST00000359759 CASP14P31944 242 aa17.48■□□□□ 0.39
COL18A1-203ENST00000359759 DYNLT1P63172 113 aa17.48■□□□□ 0.39
COL18A1-203ENST00000359759 ARMCX5Q6P1M9 558 aa17.48■□□□□ 0.39
COL18A1-203ENST00000359759 CDKL2Q92772 493 aa17.48■□□□□ 0.39
COL18A1-203ENST00000359759 EPS15L1Q9UBC2 864 aa17.48■□□□□ 0.39
COL18A1-203ENST00000359759 SH3BGRP55822 239 aaPredicted RBP17.48■□□□□ 0.39
COL18A1-203ENST00000359759 IGBP1P78318 339 aa17.48■□□□□ 0.39
COL18A1-203ENST00000359759 PKP1Q13835 747 aa17.48■□□□□ 0.39
COL18A1-203ENST00000359759 SYMPKQ92797 1274 aaKnown RBP17.48■□□□□ 0.39
COL18A1-203ENST00000359759 APOL6Q9BWW8 343 aa17.48■□□□□ 0.39
COL18A1-203ENST00000359759 OLA1Q9NTK5 396 aaKnown RBP17.48■□□□□ 0.39
COL18A1-203ENST00000359759 TCP1P17987 556 aaKnown RBP17.48■□□□□ 0.39
COL18A1-203ENST00000359759 MYL7Q01449 175 aa17.48■□□□□ 0.39
COL18A1-203ENST00000359759 CYP4F22Q6NT55 531 aa17.48■□□□□ 0.39
COL18A1-203ENST00000359759 DPP8Q6V1X1 898 aaPredicted RBP17.48■□□□□ 0.39
COL18A1-203ENST00000359759 NOSTRINQ8IVI9 506 aa17.48■□□□□ 0.39
COL18A1-203ENST00000359759 ATP6V1E2Q96A05 226 aa17.48■□□□□ 0.39
COL18A1-203ENST00000359759 FGD4Q96M96 766 aa17.48■□□□□ 0.39
COL18A1-203ENST00000359759 PTH1RQ03431 593 aa17.48■□□□□ 0.39
COL18A1-203ENST00000359759 ZBTB17Q13105 803 aa17.48■□□□□ 0.39
COL18A1-203ENST00000359759 LPIN2Q92539 896 aa17.48■□□□□ 0.39
COL18A1-203ENST00000359759 IQCDQ96DY2 449 aa17.48■□□□□ 0.39
COL18A1-203ENST00000359759 PCDHA12Q9UN75 941 aa17.48■□□□□ 0.39
COL18A1-203ENST00000359759 EPN1Q9Y6I3 576 aaPredicted RBP17.48■□□□□ 0.39
COL18A1-203ENST00000359759 LAMC3Q9Y6N6 1575 aa17.48■□□□□ 0.39
COL18A1-203ENST00000359759 POLR3AO14802 1390 aaPredicted RBP17.48■□□□□ 0.39
COL18A1-203ENST00000359759 TOM1L1O75674 476 aa17.48■□□□□ 0.39
COL18A1-203ENST00000359759 A1BGP04217 495 aa17.48■□□□□ 0.39
COL18A1-203ENST00000359759 SEPT8Q92599 483 aa17.48■□□□□ 0.39
COL18A1-203ENST00000359759 MAGOHBQ96A72 148 aaKnown RBP17.48■□□□□ 0.39
COL18A1-203ENST00000359759 XPO5Q9HAV4 1204 aaKnown RBP eCLIP17.48■□□□□ 0.399e-8■■■□□ 15.6
COL18A1-203ENST00000359759 HSP90AA5PQ58FG0 334 aa17.47■□□□□ 0.39
COL18A1-203ENST00000359759 RBL2Q08999 1139 aa17.47■□□□□ 0.39
COL18A1-203ENST00000359759 TRIP13Q15645 432 aaPredicted RBP17.47■□□□□ 0.39
COL18A1-203ENST00000359759 PSTPIP2Q9H939 334 aa17.47■□□□□ 0.39
COL18A1-203ENST00000359759 SUGCTQ9HAC7 445 aa17.47■□□□□ 0.39
COL18A1-203ENST00000359759 ZNF277Q9NRM2 450 aaPredicted RBP17.47■□□□□ 0.39
COL18A1-203ENST00000359759 PCDHB4Q9Y5E5 795 aa17.47■□□□□ 0.39
COL18A1-203ENST00000359759 AOX1Q06278 1338 aa17.47■□□□□ 0.39
COL18A1-203ENST00000359759 STX1BP61266 288 aa17.47■□□□□ 0.39
COL18A1-203ENST00000359759 TMEM259Q4ZIN3 620 aa17.47■□□□□ 0.39
COL18A1-203ENST00000359759 ZSCAN10Q96SZ4 725 aaPredicted RBP17.47■□□□□ 0.39
COL18A1-203ENST00000359759 IPO11Q9UI26 975 aaKnown RBP17.47■□□□□ 0.39
COL18A1-203ENST00000359759 FNDC3AQ9Y2H6 1198 aaKnown RBP17.47■□□□□ 0.39
COL18A1-203ENST00000359759 RNF8O76064 485 aa17.47■□□□□ 0.39
COL18A1-203ENST00000359759 EEF1DP29692 281 aaKnown RBP17.47■□□□□ 0.39
COL18A1-203ENST00000359759 TCP11X2Q5H9J9 407 aa17.47■□□□□ 0.39
COL18A1-203ENST00000359759 SDR42E1Q8WUS8 393 aa17.47■□□□□ 0.39
COL18A1-203ENST00000359759 CNOT6LQ96LI5 555 aaKnown RBP17.47■□□□□ 0.39
COL18A1-203ENST00000359759 ZMAT2Q96NC0 199 aaKnown RBP17.47■□□□□ 0.39
COL18A1-203ENST00000359759 PARD3Q8TEW0 1356 aa17.47■□□□□ 0.39
COL18A1-203ENST00000359759 ZNF790Q6PG37 636 aa17.47■□□□□ 0.39
COL18A1-203ENST00000359759 TEKT1Q969V4 418 aa17.47■□□□□ 0.39
COL18A1-203ENST00000359759 TPCN1Q9ULQ1 816 aa17.47■□□□□ 0.39
COL18A1-203ENST00000359759 CFLARO15519 480 aa17.46■□□□□ 0.39
COL18A1-203ENST00000359759 CSPG5O95196 566 aa17.46■□□□□ 0.39
COL18A1-203ENST00000359759 NCF2P19878 526 aaPredicted RBP17.46■□□□□ 0.39
COL18A1-203ENST00000359759 RAB44Q7Z6P3 723 aaPredicted RBP17.46■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms