RNA–Protein interactions for RNA: ENST00000330374.6

VMA21-201, Transcript of VMA21, vacuolar ATPase assembly factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VMA21, Length 4,717 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMA21-201ENST00000330374 ATP2C2O75185 946 aa8.78□□□□□ -1
VMA21-201ENST00000330374 UQCRFS1P1P0C7P4 283 aa8.78□□□□□ -1
VMA21-201ENST00000330374 GUCY1A3Q02108 690 aa8.78□□□□□ -1
VMA21-201ENST00000330374 PAPD7Q5XG87 772 aaKnown RBP8.78□□□□□ -1
VMA21-201ENST00000330374 OTUD6BQ8N6M0 293 aa8.78□□□□□ -1
VMA21-201ENST00000330374 FAM170AA1A519 330 aa8.78□□□□□ -1
VMA21-201ENST00000330374 SSBP05455 408 aaKnown RBP eCLIP8.78□□□□□ -1
VMA21-201ENST00000330374 CSF1RP07333 972 aa8.78□□□□□ -1
VMA21-201ENST00000330374 TMC4Q7Z404 712 aa8.78□□□□□ -1
VMA21-201ENST00000330374 MSL3Q8N5Y2 521 aaKnown RBP8.78□□□□□ -1
VMA21-201ENST00000330374 STAG1Q8WVM7 1258 aa8.78□□□□□ -1
VMA21-201ENST00000330374 JPH2Q9BR39 696 aaPredicted RBP8.78□□□□□ -1
VMA21-201ENST00000330374 ARHGAP23Q9P227 1491 aa8.78□□□□□ -1
VMA21-201ENST00000330374 MAP3K15Q6ZN16 1313 aa8.78□□□□□ -1
VMA21-201ENST00000330374 LRRC10BA6NIK2 292 aa8.78□□□□□ -1
VMA21-201ENST00000330374 EIF3HO15372 352 aaKnown RBP eCLIP8.78□□□□□ -1
VMA21-201ENST00000330374 AKR1B10O60218 316 aa8.78□□□□□ -1
VMA21-201ENST00000330374 HPDP32754 393 aaPredicted RBP8.78□□□□□ -1
VMA21-201ENST00000330374 DYNLL1P63167 89 aaKnown RBP8.78□□□□□ -1
VMA21-201ENST00000330374 MAP2K5Q13163 448 aa8.78□□□□□ -1
VMA21-201ENST00000330374 PUM3Q15397 648 aaKnown RBP8.78□□□□□ -1
VMA21-201ENST00000330374 ADGRA1Q86SQ6 560 aa8.78□□□□□ -1
VMA21-201ENST00000330374 TMTC2Q8N394 836 aa8.78□□□□□ -1
VMA21-201ENST00000330374 GLMNQ92990 594 aa8.78□□□□□ -1
VMA21-201ENST00000330374 NOC4LQ9BVI4 516 aaKnown RBP8.78□□□□□ -1
VMA21-201ENST00000330374 IFIH1Q9BYX4 1025 aaKnown RBP8.78□□□□□ -1
VMA21-201ENST00000330374 MMRN2Q9H8L6 949 aa8.78□□□□□ -1
VMA21-201ENST00000330374 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP8.78□□□□□ -1
VMA21-201ENST00000330374 H7C1D1 291 aa8.78□□□□□ -1
VMA21-201ENST00000330374 SLC5A1P13866 664 aa8.78□□□□□ -1
VMA21-201ENST00000330374 FECHP22830 423 aa8.78□□□□□ -1
VMA21-201ENST00000330374 TTMPQ5BVD1 217 aa8.78□□□□□ -1
VMA21-201ENST00000330374 PROCA1Q8NCQ7 364 aaPredicted RBP8.78□□□□□ -1
VMA21-201ENST00000330374 EHBP1Q8NDI1 1231 aa8.78□□□□□ -1
VMA21-201ENST00000330374 RNF41Q9H4P4 317 aaPredicted RBP8.78□□□□□ -1
VMA21-201ENST00000330374 EXOC1Q9NV70 894 aa8.78□□□□□ -1
VMA21-201ENST00000330374 CAPN11Q9UMQ6 739 aa8.78□□□□□ -1
VMA21-201ENST00000330374 ECM29Q5VYK3 1845 aa8.77□□□□□ -1
VMA21-201ENST00000330374 MYH13Q9UKX3 1938 aa8.77□□□□□ -1
VMA21-201ENST00000330374 ABCC12Q96J65 1359 aa8.77□□□□□ -1.01
VMA21-201ENST00000330374 PSMA7O14818 248 aa8.77□□□□□ -1.01
VMA21-201ENST00000330374 UBA7P41226 1012 aa8.77□□□□□ -1.01
VMA21-201ENST00000330374 SEC24CP53992 1094 aa8.77□□□□□ -1.01
VMA21-201ENST00000330374 ATP2C1P98194 919 aaPredicted RBP8.77□□□□□ -1.01
VMA21-201ENST00000330374 PPP1R15BQ5SWA1 713 aa8.77□□□□□ -1.01
VMA21-201ENST00000330374 IQCEQ6IPM2 695 aa8.77□□□□□ -1.01
VMA21-201ENST00000330374 NLRP10Q86W26 655 aa8.77□□□□□ -1.01
VMA21-201ENST00000330374 SPATA4Q8NEY3 305 aa8.77□□□□□ -1.01
VMA21-201ENST00000330374 LPIN2Q92539 896 aa8.77□□□□□ -1.01
VMA21-201ENST00000330374 CCDC43Q96MW1 224 aaKnown RBP8.77□□□□□ -1.01
VMA21-201ENST00000330374 ZSCAN10Q96SZ4 725 aaPredicted RBP8.77□□□□□ -1.01
VMA21-201ENST00000330374 RMND1Q9NWS8 449 aa8.77□□□□□ -1.01
VMA21-201ENST00000330374 SPATA31A3Q5VYP0 1347 aa8.77□□□□□ -1.01
VMA21-201ENST00000330374 WTIPA6NIX2 430 aaPredicted RBP8.77□□□□□ -1.01
VMA21-201ENST00000330374 BACH1O14867 736 aa8.77□□□□□ -1.01
VMA21-201ENST00000330374 MAP3K7O43318 606 aa8.77□□□□□ -1.01
VMA21-201ENST00000330374 TACC1O75410 805 aa8.77□□□□□ -1.01
VMA21-201ENST00000330374 ALX1Q15699 326 aa8.77□□□□□ -1.01
VMA21-201ENST00000330374 KCNV1Q6PIU1 500 aa8.77□□□□□ -1.01
VMA21-201ENST00000330374 DNAJC7Q99615 494 aa8.77□□□□□ -1.01
VMA21-201ENST00000330374 NFU1Q9UMS0 254 aa8.77□□□□□ -1.01
VMA21-201ENST00000330374 TARSL2A2RTX5 802 aaKnown RBP8.77□□□□□ -1.01
VMA21-201ENST00000330374 ZNF263O14978 683 aa8.77□□□□□ -1.01
VMA21-201ENST00000330374 PPP1R37O75864 691 aa8.77□□□□□ -1.01
VMA21-201ENST00000330374 NNTQ13423 1086 aa8.77□□□□□ -1.01
VMA21-201ENST00000330374 TSNAXIP1Q2TAA8 658 aa8.77□□□□□ -1.01
VMA21-201ENST00000330374 C8orf74Q6P047 294 aa8.77□□□□□ -1.01
VMA21-201ENST00000330374 CCDC91Q7Z6B0 441 aa8.77□□□□□ -1.01
VMA21-201ENST00000330374 SRBD1Q8N5C6 995 aaKnown RBP8.77□□□□□ -1.01
VMA21-201ENST00000330374 CNOT6LQ96LI5 555 aaKnown RBP8.77□□□□□ -1.01
VMA21-201ENST00000330374 VRTNQ9H8Y1 702 aa8.77□□□□□ -1.01
VMA21-201ENST00000330374 SCN11AQ9UI33 1791 aa8.76□□□□□ -1.01
VMA21-201ENST00000330374 MAP2K2P36507 400 aa8.76□□□□□ -1.01
VMA21-201ENST00000330374 MAATS1Q7Z4T9 603 aa8.76□□□□□ -1.01
VMA21-201ENST00000330374 IQCA1Q86XH1 822 aa8.76□□□□□ -1.01
VMA21-201ENST00000330374 CREG2Q8IUH2 290 aa8.76□□□□□ -1.01
VMA21-201ENST00000330374 ADSSL1Q8N142 457 aa8.76□□□□□ -1.01
VMA21-201ENST00000330374 VGLL2Q8N8G2 317 aa8.76□□□□□ -1.01
VMA21-201ENST00000330374 AENQ8WTP8 325 aaKnown RBP8.76□□□□□ -1.01
VMA21-201ENST00000330374 ZIM3Q96PE6 472 aa8.76□□□□□ -1.01
VMA21-201ENST00000330374 GEMIN8Q9NWZ8 242 aaKnown RBP8.76□□□□□ -1.01
VMA21-201ENST00000330374 JAG2Q9Y219 1238 aa8.76□□□□□ -1.01
VMA21-201ENST00000330374 GRIN2DO15399 1336 aa8.76□□□□□ -1.01
VMA21-201ENST00000330374 OPA1O60313 960 aa8.76□□□□□ -1.01
VMA21-201ENST00000330374 USO1O60763 962 aaKnown RBP8.76□□□□□ -1.01
VMA21-201ENST00000330374 SETQ01105 290 aaPredicted RBP8.76□□□□□ -1.01
VMA21-201ENST00000330374 ARID5AQ03989 594 aa8.76□□□□□ -1.01
VMA21-201ENST00000330374 IRF5Q13568 498 aa8.76□□□□□ -1.01
VMA21-201ENST00000330374 CT47A1Q5JQC4 288 aaPredicted RBP8.76□□□□□ -1.01
VMA21-201ENST00000330374 CD248Q9HCU0 757 aa8.76□□□□□ -1.01
VMA21-201ENST00000330374 RBM12Q9NTZ6 932 aaKnown RBP8.76□□□□□ -1.01
VMA21-201ENST00000330374 TMOD3Q9NYL9 352 aa8.76□□□□□ -1.01
VMA21-201ENST00000330374 BCCIPQ9P287 314 aaKnown RBP eCLIP8.76□□□□□ -1.01
VMA21-201ENST00000330374 SNX12Q9UMY4 172 aa8.76□□□□□ -1.01
VMA21-201ENST00000330374 FAM153BP0C7A2 387 aa8.76□□□□□ -1.01
VMA21-201ENST00000330374 FCER1AP12319 257 aa8.76□□□□□ -1.01
VMA21-201ENST00000330374 ARID4AP29374 1257 aaPredicted RBP8.76□□□□□ -1.01
VMA21-201ENST00000330374 EIF4A3P38919 411 aaKnown RBP8.76□□□□□ -1.01
VMA21-201ENST00000330374 PAFAH1B1P43034 410 aa8.76□□□□□ -1.01
VMA21-201ENST00000330374 DNM2P50570 870 aa8.76□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 86.9 ms