RNA–Protein interactions for RNA: ENST00000322887.8

SEC24A-201, Transcript of SEC24 homolog A, COPII coat complex component, humanhuman

TSL 1 (best) BASIC

Gene SEC24A, Length 2,700 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC24A-201ENST00000322887 C15orf52Q6ZUT6 534 aaKnown RBP13.65□□□□□ -0.22
SEC24A-201ENST00000322887 CNGA4Q8IV77 575 aa13.65□□□□□ -0.22
SEC24A-201ENST00000322887 FOXP1Q9H334 677 aaPredicted RBP13.65□□□□□ -0.22
SEC24A-201ENST00000322887 A0A1B0GUL6 1792 aa13.65□□□□□ -0.22
SEC24A-201ENST00000322887 PATL2C9JE40 543 aaKnown RBP13.65□□□□□ -0.22
SEC24A-201ENST00000322887 USP14P54578 494 aa13.65□□□□□ -0.22
SEC24A-201ENST00000322887 TCP11X2Q5H9J9 407 aa13.65□□□□□ -0.22
SEC24A-201ENST00000322887 PIK3AP1Q6ZUJ8 805 aa13.65□□□□□ -0.22
SEC24A-201ENST00000322887 SH3RF1Q7Z6J0 888 aa13.65□□□□□ -0.22
SEC24A-201ENST00000322887 LPIN2Q92539 896 aa13.65□□□□□ -0.22
SEC24A-201ENST00000322887 HPS3Q969F9 1004 aa13.65□□□□□ -0.22
SEC24A-201ENST00000322887 SYT17Q9BSW7 474 aa13.65□□□□□ -0.22
SEC24A-201ENST00000322887 RTFDC1Q9BY42 306 aaPredicted RBP13.65□□□□□ -0.22
SEC24A-201ENST00000322887 JRKLQ9Y4A0 524 aa13.65□□□□□ -0.22
SEC24A-201ENST00000322887 MYH13Q9UKX3 1938 aa13.65□□□□□ -0.22
SEC24A-201ENST00000322887 TNKSO95271 1327 aa13.65□□□□□ -0.22
SEC24A-201ENST00000322887 DEXIO95424 95 aa13.64□□□□□ -0.23
SEC24A-201ENST00000322887 TRAPPC11Q7Z392 1133 aa13.64□□□□□ -0.23
SEC24A-201ENST00000322887 GPATCH11Q8N954 259 aa13.64□□□□□ -0.23
SEC24A-201ENST00000322887 CAGE1Q8TC20 777 aa13.64□□□□□ -0.23
SEC24A-201ENST00000322887 TTF2Q9UNY4 1162 aaKnown RBP13.64□□□□□ -0.23
SEC24A-201ENST00000322887 TAF1P21675 1872 aa13.64□□□□□ -0.23
SEC24A-201ENST00000322887 SPEF2Q9C093 1822 aa13.64□□□□□ -0.23
SEC24A-201ENST00000322887 FAM170AA1A519 330 aa13.64□□□□□ -0.23
SEC24A-201ENST00000322887 B4DLN1 442 aa13.64□□□□□ -0.23
SEC24A-201ENST00000322887 ATP2B4P23634 1241 aa13.64□□□□□ -0.23
SEC24A-201ENST00000322887 LIFRP42702 1097 aa13.64□□□□□ -0.23
SEC24A-201ENST00000322887 MAGEA9P43362 315 aa13.64□□□□□ -0.23
SEC24A-201ENST00000322887 ICE2Q659A1 982 aa13.64□□□□□ -0.23
SEC24A-201ENST00000322887 CTR9Q6PD62 1173 aa13.64□□□□□ -0.23
SEC24A-201ENST00000322887 CYP26C1Q6V0L0 522 aa13.64□□□□□ -0.23
SEC24A-201ENST00000322887 RTKN2Q8IZC4 609 aa13.64□□□□□ -0.23
SEC24A-201ENST00000322887 ANKRD13CQ8N6S4 541 aa13.64□□□□□ -0.23
SEC24A-201ENST00000322887 SPATA5Q8NB90 893 aa13.64□□□□□ -0.23
SEC24A-201ENST00000322887 CCDC148Q8NFR7 591 aa13.64□□□□□ -0.23
SEC24A-201ENST00000322887 SELENOOQ9BVL4 669 aa13.64□□□□□ -0.23
SEC24A-201ENST00000322887 WDR19Q8NEZ3 1342 aa13.64□□□□□ -0.23
SEC24A-201ENST00000322887 SLX4Q8IY92 1834 aa13.64□□□□□ -0.23
SEC24A-201ENST00000322887 MYO1BO43795 1136 aa13.63□□□□□ -0.23
SEC24A-201ENST00000322887 IVLP07476 585 aa13.63□□□□□ -0.23
SEC24A-201ENST00000322887 CORO7P57737 925 aa13.63□□□□□ -0.23
SEC24A-201ENST00000322887 IRX3P78415 501 aaPredicted RBP13.63□□□□□ -0.23
SEC24A-201ENST00000322887 ATP2B2Q01814 1243 aa13.63□□□□□ -0.23
SEC24A-201ENST00000322887 STIM1Q13586 685 aa13.63□□□□□ -0.23
SEC24A-201ENST00000322887 TTF1Q15361 905 aaPredicted RBP13.63□□□□□ -0.23
SEC24A-201ENST00000322887 WHAMMP3Q1A5X7 153 aa13.63□□□□□ -0.23
SEC24A-201ENST00000322887 KCTD16Q68DU8 428 aa13.63□□□□□ -0.23
SEC24A-201ENST00000322887 SH2D3CQ8N5H7 860 aa13.63□□□□□ -0.23
SEC24A-201ENST00000322887 TRIML1Q8N9V2 468 aa13.63□□□□□ -0.23
SEC24A-201ENST00000322887 LRRC15Q8TF66 581 aa13.63□□□□□ -0.23
SEC24A-201ENST00000322887 JAKMIP2Q96AA8 810 aa13.63□□□□□ -0.23
SEC24A-201ENST00000322887 JADE2Q9NQC1 790 aa13.63□□□□□ -0.23
SEC24A-201ENST00000322887 DMGDHQ9UI17 866 aaKnown RBP13.63□□□□□ -0.23
SEC24A-201ENST00000322887 NCK2O43639 380 aa13.63□□□□□ -0.23
SEC24A-201ENST00000322887 UBE3CQ15386 1083 aa13.63□□□□□ -0.23
SEC24A-201ENST00000322887 TMTC1Q8IUR5 882 aa13.63□□□□□ -0.23
SEC24A-201ENST00000322887 COG1Q8WTW3 980 aa13.63□□□□□ -0.23
SEC24A-201ENST00000322887 VPS33BQ9H267 617 aa13.63□□□□□ -0.23
SEC24A-201ENST00000322887 AATFQ9NY61 560 aaKnown RBP eCLIP13.63□□□□□ -0.23
SEC24A-201ENST00000322887 ABCF2Q9UG63 623 aa13.63□□□□□ -0.23
SEC24A-201ENST00000322887 ARAP2Q8WZ64 1704 aa13.63□□□□□ -0.23
SEC24A-201ENST00000322887 GPSM2P81274 684 aa13.63□□□□□ -0.23
SEC24A-201ENST00000322887 NPY5RQ15761 445 aa13.63□□□□□ -0.23
SEC24A-201ENST00000322887 NLGN2Q8NFZ4 835 aa13.63□□□□□ -0.23
SEC24A-201ENST00000322887 NAA15Q9BXJ9 866 aaKnown RBP13.63□□□□□ -0.23
SEC24A-201ENST00000322887 MLXIPQ9HAP2 919 aa13.63□□□□□ -0.23
SEC24A-201ENST00000322887 SAR1BQ9Y6B6 198 aa13.63□□□□□ -0.23
SEC24A-201ENST00000322887 ZSCAN5CA6NGD5 496 aaPredicted RBP13.62□□□□□ -0.23
SEC24A-201ENST00000322887 SLC5A1P13866 664 aa13.62□□□□□ -0.23
SEC24A-201ENST00000322887 ATP1A2P50993 1020 aa13.62□□□□□ -0.23
SEC24A-201ENST00000322887 DYNLL1P63167 89 aaKnown RBP13.62□□□□□ -0.23
SEC24A-201ENST00000322887 PAK1Q13153 545 aa13.62□□□□□ -0.23
SEC24A-201ENST00000322887 SND1Q7KZF4 910 aaKnown RBP eCLIP13.62□□□□□ -0.23
SEC24A-201ENST00000322887 KIAA1328Q86T90 577 aa13.62□□□□□ -0.23
SEC24A-201ENST00000322887 ZNF512BQ96KM6 892 aaPredicted RBP13.62□□□□□ -0.23
SEC24A-201ENST00000322887 UBAC1Q9BSL1 405 aa13.62□□□□□ -0.23
SEC24A-201ENST00000322887 ZNF804BA4D1E1 1349 aa13.62□□□□□ -0.23
SEC24A-201ENST00000322887 STK36Q9NRP7 1315 aa13.62□□□□□ -0.23
SEC24A-201ENST00000322887 IRS2Q9Y4H2 1338 aa13.62□□□□□ -0.23
SEC24A-201ENST00000322887 RASSF10A6NK89 507 aa13.62□□□□□ -0.23
SEC24A-201ENST00000322887 PARP1P09874 1014 aaKnown RBP13.62□□□□□ -0.23
SEC24A-201ENST00000322887 KRT2P35908 639 aa13.62□□□□□ -0.23
SEC24A-201ENST00000322887 FAM47AQ5JRC9 791 aa13.62□□□□□ -0.23
SEC24A-201ENST00000322887 TTC38Q5R3I4 469 aa13.62□□□□□ -0.23
SEC24A-201ENST00000322887 ENAHQ8N8S7 591 aaPredicted RBP13.62□□□□□ -0.23
SEC24A-201ENST00000322887 PROCA1Q8NCQ7 364 aaPredicted RBP13.62□□□□□ -0.23
SEC24A-201ENST00000322887 SUPT20HQ8NEM7 779 aa13.62□□□□□ -0.23
SEC24A-201ENST00000322887 ARL8AQ96BM9 186 aa13.62□□□□□ -0.23
SEC24A-201ENST00000322887 PSMD1Q99460 953 aa13.62□□□□□ -0.23
SEC24A-201ENST00000322887 LRRC1Q9BTT6 524 aa13.62□□□□□ -0.23
SEC24A-201ENST00000322887 ANKIB1Q9P2G1 1089 aa13.62□□□□□ -0.23
SEC24A-201ENST00000322887 GGA1Q9UJY5 639 aa13.62□□□□□ -0.23
SEC24A-201ENST00000322887 DUOX1Q9NRD9 1551 aa13.61□□□□□ -0.23
SEC24A-201ENST00000322887 ARFGEF1Q9Y6D6 1849 aa13.61□□□□□ -0.23
SEC24A-201ENST00000322887 ESYT3A0FGR9 886 aa13.61□□□□□ -0.23
SEC24A-201ENST00000322887 ERICH2A1L162 156 aa13.61□□□□□ -0.23
SEC24A-201ENST00000322887 ZNF263O14978 683 aa13.61□□□□□ -0.23
SEC24A-201ENST00000322887 PDXDC2PQ6P474 469 aa13.61□□□□□ -0.23
SEC24A-201ENST00000322887 ZNF579Q8NAF0 562 aaKnown RBP13.61□□□□□ -0.23
SEC24A-201ENST00000322887 TSEN2Q8NCE0 465 aaKnown RBP13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms