RNA–Protein interactions for RNA: ENST00000321453.11

PDE1C-201, Transcript of phosphodiesterase 1C, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene PDE1C, Length 2,898 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE1C-201ENST00000321453 SYNE4Q8N205 404 aa18.4■□□□□ 0.54
PDE1C-201ENST00000321453 FANCBQ8NB91 859 aa18.4■□□□□ 0.54
PDE1C-201ENST00000321453 NOC3LQ8WTT2 800 aaKnown RBP18.4■□□□□ 0.54
PDE1C-201ENST00000321453 PPIL4Q8WUA2 492 aaKnown RBP eCLIP18.4■□□□□ 0.54
PDE1C-201ENST00000321453 CAVIN3Q969G5 261 aa18.4■□□□□ 0.54
PDE1C-201ENST00000321453 ATP6V1G3Q96LB4 118 aa18.4■□□□□ 0.54
PDE1C-201ENST00000321453 PACSIN2Q9UNF0 486 aaPredicted RBP18.4■□□□□ 0.54
PDE1C-201ENST00000321453 V9GY48 417 aaPredicted RBP18.4■□□□□ 0.54
PDE1C-201ENST00000321453 ARFGEF2Q9Y6D5 1785 aa18.4■□□□□ 0.54
PDE1C-201ENST00000321453 GTPBP6O43824 516 aaPredicted RBP18.4■□□□□ 0.54
PDE1C-201ENST00000321453 IL17AQ16552 155 aa18.4■□□□□ 0.54
PDE1C-201ENST00000321453 PTPROQ16827 1216 aa18.4■□□□□ 0.54
PDE1C-201ENST00000321453 TICAM2Q86XR7 235 aa18.4■□□□□ 0.54
PDE1C-201ENST00000321453 ZNF654Q8IZM8 581 aa18.4■□□□□ 0.54
PDE1C-201ENST00000321453 PURBQ96QR8 312 aaKnown RBP18.4■□□□□ 0.54
PDE1C-201ENST00000321453 KRT12Q99456 494 aa18.4■□□□□ 0.54
PDE1C-201ENST00000321453 EXOC1Q9NV70 894 aa18.4■□□□□ 0.54
PDE1C-201ENST00000321453 PCDHA13Q9Y5I0 950 aa18.4■□□□□ 0.54
PDE1C-201ENST00000321453 ERICH2A1L162 156 aa18.39■□□□□ 0.53
PDE1C-201ENST00000321453 PP2D1A8MPX8 630 aa18.39■□□□□ 0.53
PDE1C-201ENST00000321453 ADAMTS3O15072 1205 aa18.39■□□□□ 0.53
PDE1C-201ENST00000321453 USO1O60763 962 aaKnown RBP18.39■□□□□ 0.53
PDE1C-201ENST00000321453 TATP17735 454 aaPredicted RBP18.39■□□□□ 0.53
PDE1C-201ENST00000321453 BRD2P25440 801 aaKnown RBP18.39■□□□□ 0.53
PDE1C-201ENST00000321453 PEX19P40855 299 aa18.39■□□□□ 0.53
PDE1C-201ENST00000321453 ZC3H6P61129 1189 aaKnown RBP18.39■□□□□ 0.53
PDE1C-201ENST00000321453 YTHDF3Q7Z739 585 aaKnown RBP18.39■□□□□ 0.53
PDE1C-201ENST00000321453 RAPGEF4Q8WZA2 1011 aa18.39■□□□□ 0.53
PDE1C-201ENST00000321453 FAM89AQ96GI7 184 aa18.39■□□□□ 0.53
PDE1C-201ENST00000321453 SH2D4AQ9H788 454 aa18.39■□□□□ 0.53
PDE1C-201ENST00000321453 FAM207AQ9NSI2 230 aaPredicted RBP18.39■□□□□ 0.53
PDE1C-201ENST00000321453 BAIAP2L1Q9UHR4 511 aa18.39■□□□□ 0.53
PDE1C-201ENST00000321453 RIPOR2Q9Y4F9 1068 aa18.39■□□□□ 0.53
PDE1C-201ENST00000321453 PDS5AQ29RF7 1337 aaKnown RBP18.39■□□□□ 0.53
PDE1C-201ENST00000321453 H7C1D1 291 aa18.39■□□□□ 0.53
PDE1C-201ENST00000321453 PLEKHA8P1O95397 391 aa18.39■□□□□ 0.53
PDE1C-201ENST00000321453 MTIF2P46199 727 aaKnown RBP18.39■□□□□ 0.53
PDE1C-201ENST00000321453 CCNHP51946 323 aaPredicted RBP18.39■□□□□ 0.53
PDE1C-201ENST00000321453 CASKIN2Q8WXE0 1202 aa18.39■□□□□ 0.53
PDE1C-201ENST00000321453 TRIM6Q9C030 488 aaPredicted RBP18.39■□□□□ 0.53
PDE1C-201ENST00000321453 PPP1R12AO14974 1030 aaPredicted RBP18.38■□□□□ 0.53
PDE1C-201ENST00000321453 ITGB3BPQ13352 177 aaPredicted RBP18.38■□□□□ 0.53
PDE1C-201ENST00000321453 BIRC2Q13490 618 aa18.38■□□□□ 0.53
PDE1C-201ENST00000321453 HLTFQ14527 1009 aaKnown RBP eCLIP18.38■□□□□ 0.53
PDE1C-201ENST00000321453 PIK3AP1Q6ZUJ8 805 aa18.38■□□□□ 0.53
PDE1C-201ENST00000321453 IFT20Q8IY31 132 aa18.38■□□□□ 0.53
PDE1C-201ENST00000321453 STRBPQ96SI9 672 aaKnown RBP18.38■□□□□ 0.53
PDE1C-201ENST00000321453 EPHB6O15197 1021 aa18.38■□□□□ 0.53
PDE1C-201ENST00000321453 AKR1B10O60218 316 aa18.38■□□□□ 0.53
PDE1C-201ENST00000321453 EIF4A3P38919 411 aaKnown RBP18.38■□□□□ 0.53
PDE1C-201ENST00000321453 STAT6P42226 847 aa18.38■□□□□ 0.53
PDE1C-201ENST00000321453 ODF2Q5BJF6 829 aa18.38■□□□□ 0.53
PDE1C-201ENST00000321453 AKNAD1Q5T1N1 836 aa18.38■□□□□ 0.53
PDE1C-201ENST00000321453 CHADLQ6NUI6 762 aa18.38■□□□□ 0.53
PDE1C-201ENST00000321453 C6orf89Q6UWU4 347 aa18.38■□□□□ 0.53
PDE1C-201ENST00000321453 KLHL7Q8IXQ5 586 aa18.38■□□□□ 0.53
PDE1C-201ENST00000321453 CSGALNACT2Q8N6G5 542 aa18.38■□□□□ 0.53
PDE1C-201ENST00000321453 FERMT2Q96AC1 680 aa18.38■□□□□ 0.53
PDE1C-201ENST00000321453 BCL9LQ86UU0 1499 aa18.37■□□□□ 0.53
PDE1C-201ENST00000321453 CIAO1O76071 339 aa18.37■□□□□ 0.53
PDE1C-201ENST00000321453 RASSF7Q02833 373 aa18.37■□□□□ 0.53
PDE1C-201ENST00000321453 ANKRD20A8PQ5CZ79 823 aa18.37■□□□□ 0.53
PDE1C-201ENST00000321453 KCNH5Q8NCM2 988 aa18.37■□□□□ 0.53
PDE1C-201ENST00000321453 THOC1Q96FV9 657 aaKnown RBP18.37■□□□□ 0.53
PDE1C-201ENST00000321453 SGSM3Q96HU1 749 aa18.37■□□□□ 0.53
PDE1C-201ENST00000321453 ARHGAP20Q9P2F6 1191 aa18.37■□□□□ 0.53
PDE1C-201ENST00000321453 NFAT5O94916 1531 aa18.37■□□□□ 0.53
PDE1C-201ENST00000321453 ANKRD18BA2A2Z9 1011 aa18.37■□□□□ 0.53
PDE1C-201ENST00000321453 FTCDO95954 541 aa18.37■□□□□ 0.53
PDE1C-201ENST00000321453 DNM2P50570 870 aa18.37■□□□□ 0.53
PDE1C-201ENST00000321453 KIF11P52732 1056 aa18.37■□□□□ 0.53
PDE1C-201ENST00000321453 ADSSL1Q8N142 457 aa18.37■□□□□ 0.53
PDE1C-201ENST00000321453 MAGEB6Q8N7X4 407 aa18.37■□□□□ 0.53
PDE1C-201ENST00000321453 TTYH3Q9C0H2 523 aa18.37■□□□□ 0.53
PDE1C-201ENST00000321453 A0A1W2PQC6 194 aa18.36■□□□□ 0.53
PDE1C-201ENST00000321453 SNAP23O00161 211 aa18.36■□□□□ 0.53
PDE1C-201ENST00000321453 SRGNP10124 158 aa18.36■□□□□ 0.53
PDE1C-201ENST00000321453 PHKA1P46020 1223 aa18.36■□□□□ 0.53
PDE1C-201ENST00000321453 ZBED6P86452 979 aa18.36■□□□□ 0.53
PDE1C-201ENST00000321453 PROSER2Q86WR7 435 aaPredicted RBP18.36■□□□□ 0.53
PDE1C-201ENST00000321453 HELBQ8NG08 1087 aaPredicted RBP18.36■□□□□ 0.53
PDE1C-201ENST00000321453 MTMR8Q96EF0 704 aa18.36■□□□□ 0.53
PDE1C-201ENST00000321453 ALS2CR12Q96Q35 445 aa18.36■□□□□ 0.53
PDE1C-201ENST00000321453 PHF20L1A8MW92 1017 aa18.36■□□□□ 0.53
PDE1C-201ENST00000321453 CSB-PGBD3P0DP91 1061 aa18.36■□□□□ 0.53
PDE1C-201ENST00000321453 SCTRP47872 440 aa18.36■□□□□ 0.53
PDE1C-201ENST00000321453 PAK2Q13177 524 aa18.36■□□□□ 0.53
PDE1C-201ENST00000321453 PKN1Q16512 942 aa18.36■□□□□ 0.53
PDE1C-201ENST00000321453 TLR10Q9BXR5 811 aa18.36■□□□□ 0.53
PDE1C-201ENST00000321453 LEMD3Q9Y2U8 911 aa18.36■□□□□ 0.53
PDE1C-201ENST00000321453 UBR1Q8IWV7 1749 aa18.36■□□□□ 0.53
PDE1C-201ENST00000321453 EIF4E1BA6NMX2 242 aaKnown RBP18.36■□□□□ 0.53
PDE1C-201ENST00000321453 A6NNZ2 444 aa18.36■□□□□ 0.53
PDE1C-201ENST00000321453 MINDY4BA8MYZ0 360 aa18.36■□□□□ 0.53
PDE1C-201ENST00000321453 PHKG2P15735 406 aa18.36■□□□□ 0.53
PDE1C-201ENST00000321453 TCP1P17987 556 aaKnown RBP18.36■□□□□ 0.53
PDE1C-201ENST00000321453 TUBB8Q3ZCM7 444 aa18.36■□□□□ 0.53
PDE1C-201ENST00000321453 DDX42Q86XP3 938 aaKnown RBP eCLIP18.36■□□□□ 0.53
PDE1C-201ENST00000321453 CCDC170Q8IYT3 715 aa18.36■□□□□ 0.53
PDE1C-201ENST00000321453 MIGA1Q8NAN2 632 aa18.36■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms