RNA–Protein interactions for RNA: ENST00000320936.9

CIRBP-201, Transcript of cold inducible RNA binding protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CIRBP, Length 1,328 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-201ENST00000320936 PIBF1Q8WXW3 757 aa21.75■■□□□ 1.07
CIRBP-201ENST00000320936 PTPDC1A2A3K4 754 aa21.74■■□□□ 1.07
CIRBP-201ENST00000320936 GJB1P08034 283 aa21.74■■□□□ 1.07
CIRBP-201ENST00000320936 EN2P19622 333 aaPredicted RBP21.74■■□□□ 1.07
CIRBP-201ENST00000320936 RPS6KB1P23443 525 aa21.74■■□□□ 1.07
CIRBP-201ENST00000320936 DHX30Q7L2E3 1194 aaKnown RBP eCLIP21.74■■□□□ 1.07
CIRBP-201ENST00000320936 SGMS1Q86VZ5 419 aa21.74■■□□□ 1.07
CIRBP-201ENST00000320936 FBXO11Q86XK2 927 aa21.74■■□□□ 1.07
CIRBP-201ENST00000320936 MCM3APO60318 1980 aa21.73■■□□□ 1.07
CIRBP-201ENST00000320936 KLF18A0A0U1RQI7 1052 aa21.73■■□□□ 1.07
CIRBP-201ENST00000320936 NFIBO00712 420 aa21.73■■□□□ 1.07
CIRBP-201ENST00000320936 CCND3P30281 292 aaPredicted RBP21.73■■□□□ 1.07
CIRBP-201ENST00000320936 MAP3K21Q5TCX8 1036 aa21.73■■□□□ 1.07
CIRBP-201ENST00000320936 Q6ZUG5 572 aa21.73■■□□□ 1.07
CIRBP-201ENST00000320936 MAP3K14Q99558 947 aa21.73■■□□□ 1.07
CIRBP-201ENST00000320936 DIS3Q9Y2L1 958 aaKnown RBP21.73■■□□□ 1.07
CIRBP-201ENST00000320936 ABCB11O95342 1321 aa21.72■■□□□ 1.07
CIRBP-201ENST00000320936 DNAJC25-GNG10A0A024R161 153 aa21.72■■□□□ 1.07
CIRBP-201ENST00000320936 ZBTB43O43298 467 aa21.72■■□□□ 1.07
CIRBP-201ENST00000320936 GNAQP50148 359 aa21.72■■□□□ 1.07
CIRBP-201ENST00000320936 APOA5Q6Q788 366 aa21.72■■□□□ 1.07
CIRBP-201ENST00000320936 U2AF1L4Q8WU68 220 aaKnown RBP21.72■■□□□ 1.07
CIRBP-201ENST00000320936 PIGSQ96S52 555 aa21.72■■□□□ 1.07
CIRBP-201ENST00000320936 TINF2Q9BSI4 451 aa21.72■■□□□ 1.07
CIRBP-201ENST00000320936 PAK6Q9NQU5 681 aaPredicted RBP21.72■■□□□ 1.07
CIRBP-201ENST00000320936 CYP39A1Q9NYL5 469 aa21.72■■□□□ 1.07
CIRBP-201ENST00000320936 CYP46A1Q9Y6A2 500 aa21.72■■□□□ 1.07
CIRBP-201ENST00000320936 LCTP09848 1927 aa21.71■■□□□ 1.07
CIRBP-201ENST00000320936 FRMPD3Q5JV73 1810 aa21.71■■□□□ 1.07
CIRBP-201ENST00000320936 ZBTB5O15062 677 aa21.71■■□□□ 1.07
CIRBP-201ENST00000320936 TFRCP02786 760 aaKnown RBP21.71■■□□□ 1.07
CIRBP-201ENST00000320936 CALML3P27482 149 aa21.71■■□□□ 1.07
CIRBP-201ENST00000320936 CNTN2Q02246 1040 aa21.71■■□□□ 1.07
CIRBP-201ENST00000320936 BRF1Q92994 677 aa21.71■■□□□ 1.07
CIRBP-201ENST00000320936 LZTS2Q9BRK4 669 aa21.71■■□□□ 1.07
CIRBP-201ENST00000320936 AMNQ9BXJ7 453 aa21.71■■□□□ 1.07
CIRBP-201ENST00000320936 CNPY2Q9Y2B0 182 aa21.71■■□□□ 1.07
CIRBP-201ENST00000320936 GTF3C3Q9Y5Q9 886 aa21.71■■□□□ 1.07
CIRBP-201ENST00000320936 GOLGA8AA7E2F4 631 aa21.7■■□□□ 1.06
CIRBP-201ENST00000320936 GOLGA8BA8MQT2 603 aa21.7■■□□□ 1.06
CIRBP-201ENST00000320936 PLEKHA8P1O95397 391 aa21.7■■□□□ 1.06
CIRBP-201ENST00000320936 GJA8P48165 433 aa21.7■■□□□ 1.06
CIRBP-201ENST00000320936 APOBRQ0VD83 1088 aa21.7■■□□□ 1.06
CIRBP-201ENST00000320936 BAATQ14032 418 aaPredicted RBP21.7■■□□□ 1.06
CIRBP-201ENST00000320936 RTN1Q16799 776 aa21.7■■□□□ 1.06
CIRBP-201ENST00000320936 RNF207Q6ZRF8 634 aa21.7■■□□□ 1.06
CIRBP-201ENST00000320936 RUFY3Q7L099 469 aa21.7■■□□□ 1.06
CIRBP-201ENST00000320936 CMTR1Q8N1G2 835 aaKnown RBP21.7■■□□□ 1.06
CIRBP-201ENST00000320936 FANCBQ8NB91 859 aa21.7■■□□□ 1.06
CIRBP-201ENST00000320936 CLEC4DQ8WXI8 215 aa21.7■■□□□ 1.06
CIRBP-201ENST00000320936 RRP36Q96EU6 259 aaKnown RBP21.7■■□□□ 1.06
CIRBP-201ENST00000320936 UPF3BQ9BZI7 483 aaKnown RBP21.7■■□□□ 1.06
CIRBP-201ENST00000320936 RIOX1Q9H6W3 641 aa21.7■■□□□ 1.06
CIRBP-201ENST00000320936 SEC63Q9UGP8 760 aaKnown RBP21.7■■□□□ 1.06
CIRBP-201ENST00000320936 BRPF3Q9ULD4 1205 aa21.7■■□□□ 1.06
CIRBP-201ENST00000320936 MRPL11Q9Y3B7 192 aaKnown RBP21.7■■□□□ 1.06
CIRBP-201ENST00000320936 SGPL1O95470 568 aa21.69■■□□□ 1.06
CIRBP-201ENST00000320936 CYBAP13498 195 aa21.69■■□□□ 1.06
CIRBP-201ENST00000320936 SLC35G1Q2M3R5 365 aa21.69■■□□□ 1.06
CIRBP-201ENST00000320936 PRAMEF19Q5SWL8 479 aa21.69■■□□□ 1.06
CIRBP-201ENST00000320936 SLC30A10Q6XR72 485 aa21.69■■□□□ 1.06
CIRBP-201ENST00000320936 FAM133AQ8N9E0 248 aa21.69■■□□□ 1.06
CIRBP-201ENST00000320936 SPZ1Q9BXG8 430 aa21.69■■□□□ 1.06
CIRBP-201ENST00000320936 PCDHA1Q9Y5I3 950 aa21.69■■□□□ 1.06
CIRBP-201ENST00000320936 CYTH3O43739 400 aa21.68■■□□□ 1.06
CIRBP-201ENST00000320936 TRAF1Q13077 416 aa21.68■■□□□ 1.06
CIRBP-201ENST00000320936 ZNF467Q7Z7K2 595 aaPredicted RBP21.68■■□□□ 1.06
CIRBP-201ENST00000320936 CCDC82Q8N4S0 544 aa21.68■■□□□ 1.06
CIRBP-201ENST00000320936 MSL3Q8N5Y2 521 aaKnown RBP21.68■■□□□ 1.06
CIRBP-201ENST00000320936 SHISA4Q96DD7 197 aa21.68■■□□□ 1.06
CIRBP-201ENST00000320936 MTMR8Q96EF0 704 aa21.68■■□□□ 1.06
CIRBP-201ENST00000320936 ZSWIM6Q9HCJ5 1215 aa21.68■■□□□ 1.06
CIRBP-201ENST00000320936 RBM28Q9NW13 759 aaKnown RBP21.68■■□□□ 1.06
CIRBP-201ENST00000320936 SYNGAP1Q96PV0 1343 aa21.68■■□□□ 1.06
CIRBP-201ENST00000320936 PNMA6FA0A0J9YX94 578 aa21.67■■□□□ 1.06
CIRBP-201ENST00000320936 PPP1R11O60927 126 aaPredicted RBP21.67■■□□□ 1.06
CIRBP-201ENST00000320936 SEC24BO95487 1268 aa21.67■■□□□ 1.06
CIRBP-201ENST00000320936 TMTC3Q6ZXV5 915 aa21.67■■□□□ 1.06
CIRBP-201ENST00000320936 MCF2L2Q86YR7 1114 aa21.67■■□□□ 1.06
CIRBP-201ENST00000320936 SRBD1Q8N5C6 995 aaKnown RBP21.67■■□□□ 1.06
CIRBP-201ENST00000320936 TRPV1Q8NER1 839 aa21.67■■□□□ 1.06
CIRBP-201ENST00000320936 TM6SF1Q9BZW5 370 aa21.67■■□□□ 1.06
CIRBP-201ENST00000320936 ADD3Q9UEY8 706 aaKnown RBP21.67■■□□□ 1.06
CIRBP-201ENST00000320936 ZHX1Q9UKY1 873 aaPredicted RBP21.67■■□□□ 1.06
CIRBP-201ENST00000320936 SOWAHBA6NEL2 793 aa21.66■■□□□ 1.06
CIRBP-201ENST00000320936 METAP2P50579 478 aaKnown RBP eCLIP21.66■■□□□ 1.06
CIRBP-201ENST00000320936 RPS6P62753 249 aaKnown RBP21.66■■□□□ 1.06
CIRBP-201ENST00000320936 MLLT1Q03111 559 aaPredicted RBP21.66■■□□□ 1.06
CIRBP-201ENST00000320936 C8orf34Q49A92 452 aa21.66■■□□□ 1.06
CIRBP-201ENST00000320936 ARMCX2Q7L311 632 aa21.66■■□□□ 1.06
CIRBP-201ENST00000320936 FGD4Q96M96 766 aa21.66■■□□□ 1.06
CIRBP-201ENST00000320936 PURBQ96QR8 312 aaKnown RBP21.66■■□□□ 1.06
CIRBP-201ENST00000320936 CDKN2AIPQ9NXV6 580 aaPredicted RBP21.66■■□□□ 1.06
CIRBP-201ENST00000320936 DDX20Q9UHI6 824 aaKnown RBP21.66■■□□□ 1.06
CIRBP-201ENST00000320936 LRRC37A2A6NM11 1700 aa21.66■■□□□ 1.06
CIRBP-201ENST00000320936 ASB14A6NK59 587 aa21.65■■□□□ 1.06
CIRBP-201ENST00000320936 MSCO60682 206 aa21.65■■□□□ 1.06
CIRBP-201ENST00000320936 FARP2O94887 1054 aaPredicted RBP21.65■■□□□ 1.06
CIRBP-201ENST00000320936 IGHA2P01877 340 aa21.65■■□□□ 1.06
CIRBP-201ENST00000320936 ANAPC15P60006 121 aa21.65■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 78.5 ms