RNA–Protein interactions for RNA: ENST00000316763.7

VRK3-201, Transcript of vaccinia related kinase 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VRK3, Length 1,938 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-201ENST00000316763 VSTM4Q8IW00 320 aa16.07■□□□□ 0.16
VRK3-201ENST00000316763 KIF18AQ8NI77 898 aa16.07■□□□□ 0.16
VRK3-201ENST00000316763 SHISA4Q96DD7 197 aa16.07■□□□□ 0.16
VRK3-201ENST00000316763 MPHOSPH10O00566 681 aaKnown RBP16.06■□□□□ 0.16
VRK3-201ENST00000316763 KIF3CO14782 793 aa16.06■□□□□ 0.16
VRK3-201ENST00000316763 PRR29P0C7W0 189 aa16.06■□□□□ 0.16
VRK3-201ENST00000316763 BMP6P22004 513 aa16.06■□□□□ 0.16
VRK3-201ENST00000316763 CALML3P27482 149 aa16.06■□□□□ 0.16
VRK3-201ENST00000316763 NLRP5P59047 1200 aa16.06■□□□□ 0.16
VRK3-201ENST00000316763 TMEM179Q6ZVK1 233 aa16.06■□□□□ 0.16
VRK3-201ENST00000316763 CLEC10AQ8IUN9 316 aa16.06■□□□□ 0.16
VRK3-201ENST00000316763 STAG2Q8N3U4 1231 aa16.06■□□□□ 0.16
VRK3-201ENST00000316763 PYM1Q9BRP8 204 aaKnown RBP16.06■□□□□ 0.16
VRK3-201ENST00000316763 GLIS2Q9BZE0 524 aaPredicted RBP16.06■□□□□ 0.16
VRK3-201ENST00000316763 KANSL2Q9H9L4 492 aa16.06■□□□□ 0.16
VRK3-201ENST00000316763 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.06■□□□□ 0.16
VRK3-201ENST00000316763 FAM205CA6NFA0 338 aa16.06■□□□□ 0.16
VRK3-201ENST00000316763 SLFN14P0C7P3 912 aa16.06■□□□□ 0.16
VRK3-201ENST00000316763 SNHG28P0DPA3 235 aa16.06■□□□□ 0.16
VRK3-201ENST00000316763 ERCC5P28715 1186 aaPredicted RBP16.06■□□□□ 0.16
VRK3-201ENST00000316763 RRP1BQ14684 758 aaKnown RBP16.06■□□□□ 0.16
VRK3-201ENST00000316763 PFKFB3Q16875 520 aaPredicted RBP16.06■□□□□ 0.16
VRK3-201ENST00000316763 NBPF12Q5TAG4 269 aaPredicted RBP16.06■□□□□ 0.16
VRK3-201ENST00000316763 SPATA20Q8TB22 786 aa16.06■□□□□ 0.16
VRK3-201ENST00000316763 TNFRSF25Q93038 417 aa16.06■□□□□ 0.16
VRK3-201ENST00000316763 MKL1Q969V6 931 aa16.06■□□□□ 0.16
VRK3-201ENST00000316763 DHX58Q96C10 678 aa16.06■□□□□ 0.16
VRK3-201ENST00000316763 LZTS2Q9BRK4 669 aa16.06■□□□□ 0.16
VRK3-201ENST00000316763 NYAP2Q9P242 653 aa16.06■□□□□ 0.16
VRK3-201ENST00000316763 PPP2R3BQ9Y5P8 575 aa16.06■□□□□ 0.16
VRK3-201ENST00000316763 MYH8P13535 1937 aa16.05■□□□□ 0.16
VRK3-201ENST00000316763 ZNF174Q15697 407 aa16.05■□□□□ 0.16
VRK3-201ENST00000316763 ABCB5Q2M3G0 1257 aa16.05■□□□□ 0.16
VRK3-201ENST00000316763 SHROOM1Q2M3G4 852 aaPredicted RBP16.05■□□□□ 0.16
VRK3-201ENST00000316763 ZNF784Q8NCA9 323 aaPredicted RBP16.05■□□□□ 0.16
VRK3-201ENST00000316763 ANKRD7Q92527 254 aa16.05■□□□□ 0.16
VRK3-201ENST00000316763 NFE2L3Q9Y4A8 694 aa16.05■□□□□ 0.16
VRK3-201ENST00000316763 PDHBP11177 359 aa16.04■□□□□ 0.16
VRK3-201ENST00000316763 JAG1P78504 1218 aa16.04■□□□□ 0.16
VRK3-201ENST00000316763 SLC35G1Q2M3R5 365 aa16.04■□□□□ 0.16
VRK3-201ENST00000316763 EARS2Q5JPH6 523 aaKnown RBP16.04■□□□□ 0.16
VRK3-201ENST00000316763 E4F1Q66K89 784 aaPredicted RBP16.04■□□□□ 0.16
VRK3-201ENST00000316763 USP49Q70CQ1 688 aa16.04■□□□□ 0.16
VRK3-201ENST00000316763 SIAH1Q8IUQ4 282 aa16.04■□□□□ 0.16
VRK3-201ENST00000316763 GRAMD1CQ8IYS0 662 aa16.04■□□□□ 0.16
VRK3-201ENST00000316763 SYMPKQ92797 1274 aaKnown RBP16.04■□□□□ 0.16
VRK3-201ENST00000316763 SH3GLB2Q9NR46 395 aa16.04■□□□□ 0.16
VRK3-201ENST00000316763 PARP1P09874 1014 aaKnown RBP16.04■□□□□ 0.16
VRK3-201ENST00000316763 SMARCA1P28370 1054 aa16.04■□□□□ 0.16
VRK3-201ENST00000316763 ATP2C1P98194 919 aaPredicted RBP16.04■□□□□ 0.16
VRK3-201ENST00000316763 NPY5RQ15761 445 aa16.04■□□□□ 0.16
VRK3-201ENST00000316763 LRRC47Q8N1G4 583 aaKnown RBP16.04■□□□□ 0.16
VRK3-201ENST00000316763 PDCL2Q8N4E4 241 aa16.04■□□□□ 0.16
VRK3-201ENST00000316763 EPSTI1Q96J88 318 aa16.04■□□□□ 0.16
VRK3-201ENST00000316763 PPP1R13BQ96KQ4 1090 aa16.04■□□□□ 0.16
VRK3-201ENST00000316763 CCDC94Q9BW85 323 aaPredicted RBP16.04■□□□□ 0.16
VRK3-201ENST00000316763 USP17L5A8MUK1 530 aa16.03■□□□□ 0.16
VRK3-201ENST00000316763 GDF11O95390 407 aa16.03■□□□□ 0.16
VRK3-201ENST00000316763 EEF2P13639 858 aaKnown RBP16.03■□□□□ 0.16
VRK3-201ENST00000316763 PTGDRQ13258 359 aa16.03■□□□□ 0.16
VRK3-201ENST00000316763 SEPT2Q15019 361 aa16.03■□□□□ 0.16
VRK3-201ENST00000316763 CHADLQ6NUI6 762 aa16.03■□□□□ 0.16
VRK3-201ENST00000316763 USP17L2Q6R6M4 530 aa16.03■□□□□ 0.16
VRK3-201ENST00000316763 MIGA2Q7L4E1 593 aa16.03■□□□□ 0.16
VRK3-201ENST00000316763 RASGRP2Q7LDG7 609 aa16.03■□□□□ 0.16
VRK3-201ENST00000316763 SH3RF1Q7Z6J0 888 aa16.03■□□□□ 0.16
VRK3-201ENST00000316763 PAGE5Q96GU1 130 aa16.03■□□□□ 0.16
VRK3-201ENST00000316763 GSDMAQ96QA5 445 aa16.03■□□□□ 0.16
VRK3-201ENST00000316763 SPZ1Q9BXG8 430 aa16.03■□□□□ 0.16
VRK3-201ENST00000316763 KLRF2D3W0D1 207 aa16.02■□□□□ 0.16
VRK3-201ENST00000316763 CYTH3O43739 400 aa16.02■□□□□ 0.16
VRK3-201ENST00000316763 GH2P01242 217 aa16.02■□□□□ 0.16
VRK3-201ENST00000316763 ZNF18P17022 549 aa16.02■□□□□ 0.16
VRK3-201ENST00000316763 FMR1Q06787 632 aaKnown RBP eCLIP16.02■□□□□ 0.16
VRK3-201ENST00000316763 FCHSD1Q86WN1 690 aa16.02■□□□□ 0.16
VRK3-201ENST00000316763 UBE2Q2Q8WVN8 375 aa16.02■□□□□ 0.16
VRK3-201ENST00000316763 BAZ2BQ9UIF8 2168 aaKnown RBP16.02■□□□□ 0.16
VRK3-201ENST00000316763 VWA3AA6NCI4 1184 aa16.02■□□□□ 0.15
VRK3-201ENST00000316763 TRAF5O00463 557 aa16.02■□□□□ 0.15
VRK3-201ENST00000316763 AFMP43652 599 aa16.02■□□□□ 0.15
VRK3-201ENST00000316763 ICA1Q05084 483 aa16.02■□□□□ 0.15
VRK3-201ENST00000316763 ASPRV1Q53RT3 343 aa16.02■□□□□ 0.15
VRK3-201ENST00000316763 PIK3AP1Q6ZUJ8 805 aa16.02■□□□□ 0.15
VRK3-201ENST00000316763 IQUBQ8NA54 791 aa16.02■□□□□ 0.15
VRK3-201ENST00000316763 CDCA5Q96FF9 252 aa16.02■□□□□ 0.15
VRK3-201ENST00000316763 TMX1Q9H3N1 280 aa16.02■□□□□ 0.15
VRK3-201ENST00000316763 SYNPO2Q9UMS6 1093 aa16.02■□□□□ 0.15
VRK3-201ENST00000316763 GOLGA8HP0CJ92 632 aa16.01■□□□□ 0.15
VRK3-201ENST00000316763 NCBP1Q09161 790 aaKnown RBP16.01■□□□□ 0.15
VRK3-201ENST00000316763 SUPT20HL1Q3ZLR7 823 aa16.01■□□□□ 0.15
VRK3-201ENST00000316763 ARL6IP4Q66PJ3 421 aaKnown RBP16.01■□□□□ 0.15
VRK3-201ENST00000316763 BLIDQ8IZY5 108 aa16.01■□□□□ 0.15
VRK3-201ENST00000316763 MTMR7Q9Y216 660 aa16.01■□□□□ 0.15
VRK3-201ENST00000316763 A0A087X0B3 334 aa16■□□□□ 0.15
VRK3-201ENST00000316763 TMEM232C9JQI7 657 aa16■□□□□ 0.15
VRK3-201ENST00000316763 ZSCAN12O43309 604 aa16■□□□□ 0.15
VRK3-201ENST00000316763 ITGBL1O95965 494 aaPredicted RBP16■□□□□ 0.15
VRK3-201ENST00000316763 ZNF543Q08ER8 600 aa16■□□□□ 0.15
VRK3-201ENST00000316763 SPATA1Q5VX52 437 aa16■□□□□ 0.15
VRK3-201ENST00000316763 SPECC1LQ69YQ0 1117 aa16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms