RNA–Protein interactions for RNA: ENST00000290037.10

SEC16A-202, Transcript of SEC16 homolog A, endoplasmic reticulum export factor, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SEC16A, Length 8,982 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC16A-202ENST00000290037 ELOA2Q8IYF1 753 aaPredicted RBP16.17■□□□□ 0.18
SEC16A-202ENST00000290037 CCDC124Q96CT7 223 aaKnown RBP16.17■□□□□ 0.18
SEC16A-202ENST00000290037 CEP57Q86XR8 500 aa16.17■□□□□ 0.18
SEC16A-202ENST00000290037 ZNF853P0CG23 659 aa16.17■□□□□ 0.18
SEC16A-202ENST00000290037 RIOK3O14730 519 aaKnown RBP16.17■□□□□ 0.18
SEC16A-202ENST00000290037 TNNC2P02585 160 aa16.17■□□□□ 0.18
SEC16A-202ENST00000290037 PSMC4P43686 418 aa16.17■□□□□ 0.18
SEC16A-202ENST00000290037 MIF4GDA9UHW6 222 aaKnown RBP16.17■□□□□ 0.18
SEC16A-202ENST00000290037 H0YIN7 160 aa16.17■□□□□ 0.18
SEC16A-202ENST00000290037 RHOXF2BP0C7M4 288 aa16.17■□□□□ 0.18
SEC16A-202ENST00000290037 ENOX1Q8TC92 643 aaKnown RBP16.17■□□□□ 0.18
SEC16A-202ENST00000290037 RHOXF2Q9BQY4 288 aa16.17■□□□□ 0.18
SEC16A-202ENST00000290037 DDX41Q9UJV9 622 aaKnown RBP16.17■□□□□ 0.18
SEC16A-202ENST00000290037 CNKSR1Q969H4 720 aa16.16■□□□□ 0.18
SEC16A-202ENST00000290037 ANO9A1A5B4 782 aa16.16■□□□□ 0.18
SEC16A-202ENST00000290037 PODXLO00592 558 aa16.16■□□□□ 0.18
SEC16A-202ENST00000290037 MMP14P50281 582 aa16.16■□□□□ 0.18
SEC16A-202ENST00000290037 TMEM51Q9NW97 253 aa16.16■□□□□ 0.18
SEC16A-202ENST00000290037 TACC3Q9Y6A5 838 aa16.16■□□□□ 0.18
SEC16A-202ENST00000290037 V9GY48 417 aaPredicted RBP16.16■□□□□ 0.18
SEC16A-202ENST00000290037 B4E1Z4 1266 aa16.16■□□□□ 0.18
SEC16A-202ENST00000290037 BEND3Q5T5X7 828 aa16.16■□□□□ 0.18
SEC16A-202ENST00000290037 RHOT2Q8IXI1 618 aa16.16■□□□□ 0.18
SEC16A-202ENST00000290037 PPP1R2P1Q96PQ5 205 aa16.16■□□□□ 0.18
SEC16A-202ENST00000290037 ADPGKQ9BRR6 497 aa16.16■□□□□ 0.18
SEC16A-202ENST00000290037 EIF2AQ9BY44 585 aaKnown RBP16.16■□□□□ 0.18
SEC16A-202ENST00000290037 SUGT1Q9Y2Z0 365 aa16.16■□□□□ 0.18
SEC16A-202ENST00000290037 MYO3BQ8WXR4 1341 aa16.16■□□□□ 0.18
SEC16A-202ENST00000290037 TAF12Q16514 161 aa16.16■□□□□ 0.18
SEC16A-202ENST00000290037 MAN2A1Q16706 1144 aa16.16■□□□□ 0.18
SEC16A-202ENST00000290037 NEK9Q8TD19 979 aa16.16■□□□□ 0.18
SEC16A-202ENST00000290037 RSAD2Q8WXG1 361 aa16.16■□□□□ 0.18
SEC16A-202ENST00000290037 UFL1O94874 794 aa16.16■□□□□ 0.18
SEC16A-202ENST00000290037 GCNT3O95395 438 aa16.16■□□□□ 0.18
SEC16A-202ENST00000290037 CTNNA1P35221 906 aaKnown RBP16.16■□□□□ 0.18
SEC16A-202ENST00000290037 MFAP3P55082 362 aa16.16■□□□□ 0.18
SEC16A-202ENST00000290037 CWF19L2Q2TBE0 894 aaKnown RBP16.16■□□□□ 0.18
SEC16A-202ENST00000290037 CACTINQ8WUQ7 758 aaKnown RBP16.16■□□□□ 0.18
SEC16A-202ENST00000290037 NDE1Q9NXR1 346 aa16.16■□□□□ 0.18
SEC16A-202ENST00000290037 CAPZA3Q96KX2 299 aa16.16■□□□□ 0.18
SEC16A-202ENST00000290037 TTC25Q96NG3 672 aa16.16■□□□□ 0.18
SEC16A-202ENST00000290037 TIPINQ9BVW5 301 aa16.16■□□□□ 0.18
SEC16A-202ENST00000290037 SPDYE4A6NLX3 237 aa16.16■□□□□ 0.18
SEC16A-202ENST00000290037 GGPS1O95749 300 aa16.16■□□□□ 0.18
SEC16A-202ENST00000290037 PFKFB1P16118 471 aa16.16■□□□□ 0.18
SEC16A-202ENST00000290037 AP3B2Q13367 1082 aa16.16■□□□□ 0.18
SEC16A-202ENST00000290037 KRT71Q3SY84 523 aa16.16■□□□□ 0.18
SEC16A-202ENST00000290037 PLEKHF1Q96S99 279 aa16.16■□□□□ 0.18
SEC16A-202ENST00000290037 ADD3Q9UEY8 706 aaKnown RBP16.16■□□□□ 0.18
SEC16A-202ENST00000290037 RCOR1Q9UKL0 485 aa16.16■□□□□ 0.18
SEC16A-202ENST00000290037 PPP2R2CQ9Y2T4 447 aa16.16■□□□□ 0.18
SEC16A-202ENST00000290037 ANKRD35Q8N283 1001 aa16.15■□□□□ 0.18
SEC16A-202ENST00000290037 BBS5Q8N3I7 341 aa16.15■□□□□ 0.18
SEC16A-202ENST00000290037 PCGF5Q86SE9 256 aa16.15■□□□□ 0.18
SEC16A-202ENST00000290037 PCDHA12Q9UN75 941 aa16.15■□□□□ 0.18
SEC16A-202ENST00000290037 NSFL1CQ9UNZ2 370 aaKnown RBP16.15■□□□□ 0.18
SEC16A-202ENST00000290037 AP3B1O00203 1094 aa16.15■□□□□ 0.18
SEC16A-202ENST00000290037 SDCCAG3Q96C92 435 aa16.15■□□□□ 0.18
SEC16A-202ENST00000290037 STAM2O75886 525 aa16.15■□□□□ 0.18
SEC16A-202ENST00000290037 IFNAR1P17181 557 aa16.15■□□□□ 0.18
SEC16A-202ENST00000290037 GSDMBQ8TAX9 411 aa16.15■□□□□ 0.18
SEC16A-202ENST00000290037 TEKT3Q9BXF9 490 aa16.15■□□□□ 0.18
SEC16A-202ENST00000290037 USP44Q9H0E7 712 aa16.15■□□□□ 0.18
SEC16A-202ENST00000290037 KIAA0391O15091 583 aaKnown RBP16.15■□□□□ 0.18
SEC16A-202ENST00000290037 GFPT2O94808 682 aa16.15■□□□□ 0.18
SEC16A-202ENST00000290037 ZNF174Q15697 407 aa16.15■□□□□ 0.18
SEC16A-202ENST00000290037 MYCT1Q8N699 235 aa16.15■□□□□ 0.18
SEC16A-202ENST00000290037 EPN1Q9Y6I3 576 aaPredicted RBP16.15■□□□□ 0.18
SEC16A-202ENST00000290037 SYNGAP1Q96PV0 1343 aa16.15■□□□□ 0.18
SEC16A-202ENST00000290037 RPN1P04843 607 aaKnown RBP16.15■□□□□ 0.18
SEC16A-202ENST00000290037 H2AFZP0C0S5 128 aa16.15■□□□□ 0.18
SEC16A-202ENST00000290037 H2AFVQ71UI9 128 aa16.15■□□□□ 0.18
SEC16A-202ENST00000290037 CAPS2Q9BXY5 557 aa16.15■□□□□ 0.18
SEC16A-202ENST00000290037 MTMR6Q9Y217 621 aa16.15■□□□□ 0.18
SEC16A-202ENST00000290037 GRID2IPA4D2P6 1211 aa16.15■□□□□ 0.18
SEC16A-202ENST00000290037 BBOX1O75936 387 aa16.15■□□□□ 0.18
SEC16A-202ENST00000290037 POLR2MP0CAP2 368 aa16.15■□□□□ 0.18
SEC16A-202ENST00000290037 STX2P32856 288 aa16.15■□□□□ 0.18
SEC16A-202ENST00000290037 RPS8P62241 208 aaKnown RBP16.15■□□□□ 0.18
SEC16A-202ENST00000290037 PRPSAP1Q14558 356 aa16.15■□□□□ 0.18
SEC16A-202ENST00000290037 ZNF658Q5TYW1 1059 aaPredicted RBP16.15■□□□□ 0.18
SEC16A-202ENST00000290037 TRIM6Q9C030 488 aaPredicted RBP16.15■□□□□ 0.18
SEC16A-202ENST00000290037 ZSWIM4Q9H7M6 989 aa16.15■□□□□ 0.18
SEC16A-202ENST00000290037 PTPREP23469 700 aa16.14■□□□□ 0.17
SEC16A-202ENST00000290037 KRT12Q99456 494 aa16.14■□□□□ 0.17
SEC16A-202ENST00000290037 GPHNQ9NQX3 736 aaPredicted RBP16.14■□□□□ 0.17
SEC16A-202ENST00000290037 TBC1D7Q9P0N9 293 aa16.14■□□□□ 0.17
SEC16A-202ENST00000290037 SEL1LQ9UBV2 794 aa16.14■□□□□ 0.17
SEC16A-202ENST00000290037 SLFN14P0C7P3 912 aa16.14■□□□□ 0.17
SEC16A-202ENST00000290037 PPARGP37231 505 aaPredicted RBP16.14■□□□□ 0.17
SEC16A-202ENST00000290037 AMNQ9BXJ7 453 aa16.14■□□□□ 0.17
SEC16A-202ENST00000290037 DAPK3O43293 454 aa16.14■□□□□ 0.17
SEC16A-202ENST00000290037 PSTPIP2Q9H939 334 aa16.14■□□□□ 0.17
SEC16A-202ENST00000290037 DRP2Q13474 957 aa16.14■□□□□ 0.17
SEC16A-202ENST00000290037 TSPYL6Q8N831 410 aa16.14■□□□□ 0.17
SEC16A-202ENST00000290037 STK32BQ9NY57 414 aa16.14■□□□□ 0.17
SEC16A-202ENST00000290037 DPP8Q6V1X1 898 aaPredicted RBP16.14■□□□□ 0.17
SEC16A-202ENST00000290037 APLFQ8IW19 511 aaPredicted RBP16.14■□□□□ 0.17
SEC16A-202ENST00000290037 PPLO60437 1756 aa16.14■□□□□ 0.17
SEC16A-202ENST00000290037 GFM2Q969S9 779 aaKnown RBP16.13■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 94 ms