RNA–Protein interactions for RNA: ENST00000279387.11

PPP4C-201, Transcript of protein phosphatase 4 catalytic subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PPP4C, Length 1,407 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4C-201ENST00000279387 DHX30Q7L2E3 1194 aaKnown RBP eCLIP28.23■■■□□ 2.11
PPP4C-201ENST00000279387 CCDC144CPQ8IYA2 1237 aa28.23■■■□□ 2.11
PPP4C-201ENST00000279387 PIBF1Q8WXW3 757 aa28.23■■■□□ 2.11
PPP4C-201ENST00000279387 TMEM87BQ96K49 555 aa28.23■■■□□ 2.11
PPP4C-201ENST00000279387 CCDC69A6NI79 296 aa28.22■■■□□ 2.11
PPP4C-201ENST00000279387 FARP2O94887 1054 aaPredicted RBP28.22■■■□□ 2.11
PPP4C-201ENST00000279387 LHX8Q68G74 356 aa28.22■■■□□ 2.11
PPP4C-201ENST00000279387 CLEC4DQ8WXI8 215 aa28.22■■■□□ 2.11
PPP4C-201ENST00000279387 CYP39A1Q9NYL5 469 aa28.22■■■□□ 2.11
PPP4C-201ENST00000279387 SOWAHBA6NEL2 793 aa28.21■■■□□ 2.11
PPP4C-201ENST00000279387 TSGA10IPQ3SY00 556 aa28.21■■■□□ 2.11
PPP4C-201ENST00000279387 HOMER1Q86YM7 354 aa28.21■■■□□ 2.11
PPP4C-201ENST00000279387 JAKMIP1Q96N16 626 aaKnown RBP28.21■■■□□ 2.11
PPP4C-201ENST00000279387 PTPDC1A2A3K4 754 aa28.2■■■□□ 2.11
PPP4C-201ENST00000279387 BAATQ14032 418 aaPredicted RBP28.2■■■□□ 2.11
PPP4C-201ENST00000279387 SLC30A10Q6XR72 485 aa28.2■■■□□ 2.11
PPP4C-201ENST00000279387 FAM133AQ8N9E0 248 aa28.2■■■□□ 2.11
PPP4C-201ENST00000279387 DDX20Q9UHI6 824 aaKnown RBP28.2■■■□□ 2.11
PPP4C-201ENST00000279387 ASTN1O14525 1302 aa28.2■■■□□ 2.1
PPP4C-201ENST00000279387 PFASO15067 1338 aa28.2■■■□□ 2.1
PPP4C-201ENST00000279387 WDR19Q8NEZ3 1342 aa28.2■■■□□ 2.1
PPP4C-201ENST00000279387 KRT32Q14532 448 aa28.19■■■□□ 2.1
PPP4C-201ENST00000279387 DHX32Q7L7V1 743 aaKnown RBP28.19■■■□□ 2.1
PPP4C-201ENST00000279387 KCNB2Q92953 911 aa28.19■■■□□ 2.1
PPP4C-201ENST00000279387 SNAI1O95863 264 aaPredicted RBP28.18■■■□□ 2.1
PPP4C-201ENST00000279387 CALML3P27482 149 aa28.18■■■□□ 2.1
PPP4C-201ENST00000279387 EXOSC10Q01780 885 aaKnown RBP28.18■■■□□ 2.1
PPP4C-201ENST00000279387 FBXO11Q86XK2 927 aa28.18■■■□□ 2.1
PPP4C-201ENST00000279387 LENG1Q96BZ8 264 aaPredicted RBP28.18■■■□□ 2.1
PPP4C-201ENST00000279387 PAWRQ96IZ0 340 aaKnown RBP28.18■■■□□ 2.1
PPP4C-201ENST00000279387 MTA3Q9BTC8 594 aa28.18■■■□□ 2.1
PPP4C-201ENST00000279387 OGDHLQ9ULD0 1010 aa28.18■■■□□ 2.1
PPP4C-201ENST00000279387 CYTH3O43739 400 aa28.18■■■□□ 2.1
PPP4C-201ENST00000279387 PPP1R11O60927 126 aaPredicted RBP28.18■■■□□ 2.1
PPP4C-201ENST00000279387 DDAH1O94760 285 aa28.18■■■□□ 2.1
PPP4C-201ENST00000279387 MYCNP04198 464 aaPredicted RBP28.18■■■□□ 2.1
PPP4C-201ENST00000279387 LIFRP42702 1097 aa28.18■■■□□ 2.1
PPP4C-201ENST00000279387 CMTR1Q8N1G2 835 aaKnown RBP28.18■■■□□ 2.1
PPP4C-201ENST00000279387 CTCFLQ8NI51 663 aaPredicted RBP28.18■■■□□ 2.1
PPP4C-201ENST00000279387 TBC1D5Q92609 795 aa28.18■■■□□ 2.1
PPP4C-201ENST00000279387 PIGSQ96S52 555 aa28.18■■■□□ 2.1
PPP4C-201ENST00000279387 USP26Q9BXU7 913 aa28.18■■■□□ 2.1
PPP4C-201ENST00000279387 ZHX1Q9UKY1 873 aaPredicted RBP28.18■■■□□ 2.1
PPP4C-201ENST00000279387 CNPY2Q9Y2B0 182 aa28.18■■■□□ 2.1
PPP4C-201ENST00000279387 SLC12A7Q9Y666 1083 aa28.18■■■□□ 2.1
PPP4C-201ENST00000279387 ARMCX2Q7L311 632 aa28.17■■■□□ 2.1
PPP4C-201ENST00000279387 UBE2Q1Q7Z7E8 422 aa28.17■■■□□ 2.1
PPP4C-201ENST00000279387 MICU3Q86XE3 530 aa28.17■■■□□ 2.1
PPP4C-201ENST00000279387 TMTC2Q8N394 836 aa28.17■■■□□ 2.1
PPP4C-201ENST00000279387 CDKN2AIPQ9NXV6 580 aaPredicted RBP28.17■■■□□ 2.1
PPP4C-201ENST00000279387 SEPT4O43236 478 aa28.16■■■□□ 2.1
PPP4C-201ENST00000279387 PLEKHA8P1O95397 391 aa28.16■■■□□ 2.1
PPP4C-201ENST00000279387 ZNF865P0CJ78 1059 aaPredicted RBP28.16■■■□□ 2.1
PPP4C-201ENST00000279387 MNX1P50219 401 aaPredicted RBP28.16■■■□□ 2.1
PPP4C-201ENST00000279387 MAMDC4Q6UXC1 1216 aa28.16■■■□□ 2.1
PPP4C-201ENST00000279387 RNF207Q6ZRF8 634 aa28.16■■■□□ 2.1
PPP4C-201ENST00000279387 ZNF467Q7Z7K2 595 aaPredicted RBP28.16■■■□□ 2.1
PPP4C-201ENST00000279387 SYNGAP1Q96PV0 1343 aa28.15■■■□□ 2.1
PPP4C-201ENST00000279387 MTMR8Q96EF0 704 aa28.15■■■□□ 2.1
PPP4C-201ENST00000279387 RIOX1Q9H6W3 641 aa28.15■■■□□ 2.1
PPP4C-201ENST00000279387 BRPF3Q9ULD4 1205 aa28.15■■■□□ 2.1
PPP4C-201ENST00000279387 ABCB11O95342 1321 aa28.15■■■□□ 2.1
PPP4C-201ENST00000279387 ZBTB5O15062 677 aa28.14■■■□□ 2.1
PPP4C-201ENST00000279387 RPS6P62753 249 aaKnown RBP28.14■■■□□ 2.1
PPP4C-201ENST00000279387 EEPD1Q7L9B9 569 aa28.14■■■□□ 2.1
PPP4C-201ENST00000279387 NAP1L2Q9ULW6 460 aaPredicted RBP28.14■■■□□ 2.1
PPP4C-201ENST00000279387 CASTP20810 708 aaKnown RBP28.13■■■□□ 2.09
PPP4C-201ENST00000279387 FGD1P98174 961 aa28.13■■■□□ 2.09
PPP4C-201ENST00000279387 BLOC1S2Q6QNY1 142 aa28.13■■■□□ 2.09
PPP4C-201ENST00000279387 CCDC82Q8N4S0 544 aa28.13■■■□□ 2.09
PPP4C-201ENST00000279387 MSL3Q8N5Y2 521 aaKnown RBP28.13■■■□□ 2.09
PPP4C-201ENST00000279387 AMNQ9BXJ7 453 aa28.13■■■□□ 2.09
PPP4C-201ENST00000279387 PNMA2Q9UL42 364 aa28.13■■■□□ 2.09
PPP4C-201ENST00000279387 KIF5BP33176 963 aa28.12■■■□□ 2.09
PPP4C-201ENST00000279387 GJC2Q5T442 439 aaPredicted RBP28.12■■■□□ 2.09
PPP4C-201ENST00000279387 APOA5Q6Q788 366 aa28.12■■■□□ 2.09
PPP4C-201ENST00000279387 Q6ZUG5 572 aa28.12■■■□□ 2.09
PPP4C-201ENST00000279387 SGMS1Q86VZ5 419 aa28.12■■■□□ 2.09
PPP4C-201ENST00000279387 SRBD1Q8N5C6 995 aaKnown RBP28.12■■■□□ 2.09
PPP4C-201ENST00000279387 LRRC37A2A6NM11 1700 aa28.12■■■□□ 2.09
PPP4C-201ENST00000279387 ALPK3Q96L96 1907 aa28.11■■■□□ 2.09
PPP4C-201ENST00000279387 hCG_1642624A0A1W2PR95 340 aa28.11■■■□□ 2.09
PPP4C-201ENST00000279387 HMGB1P09429 215 aaKnown RBP28.11■■■□□ 2.09
PPP4C-201ENST00000279387 ACVR2BQ13705 512 aa28.11■■■□□ 2.09
PPP4C-201ENST00000279387 PCDHA1Q9Y5I3 950 aa28.11■■■□□ 2.09
PPP4C-201ENST00000279387 KLF18A0A0U1RQI7 1052 aa28.1■■■□□ 2.09
PPP4C-201ENST00000279387 MSCO60682 206 aa28.1■■■□□ 2.09
PPP4C-201ENST00000279387 ALDH5A1P51649 535 aaPredicted RBP28.1■■■□□ 2.09
PPP4C-201ENST00000279387 APOBRQ0VD83 1088 aa28.1■■■□□ 2.09
PPP4C-201ENST00000279387 SYNE3Q6ZMZ3 975 aa28.1■■■□□ 2.09
PPP4C-201ENST00000279387 NECAB2Q7Z6G3 386 aa28.1■■■□□ 2.09
PPP4C-201ENST00000279387 FANCBQ8NB91 859 aa28.1■■■□□ 2.09
PPP4C-201ENST00000279387 MAP3K14Q99558 947 aa28.1■■■□□ 2.09
PPP4C-201ENST00000279387 MRPL11Q9Y3B7 192 aaKnown RBP28.1■■■□□ 2.09
PPP4C-201ENST00000279387 ASB14A6NK59 587 aa28.09■■■□□ 2.09
PPP4C-201ENST00000279387 OPLAHO14841 1288 aa28.09■■■□□ 2.09
PPP4C-201ENST00000279387 ADCY6O43306 1168 aa28.09■■■□□ 2.09
PPP4C-201ENST00000279387 PGK1P00558 417 aa28.09■■■□□ 2.09
PPP4C-201ENST00000279387 CALM1P0DP23 149 aa28.09■■■□□ 2.09
PPP4C-201ENST00000279387 CALM2P0DP24 149 aa28.09■■■□□ 2.09
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms