RNA–Protein interactions for RNA: ENST00000267970.8

TSPAN3-201, Transcript of tetraspanin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN3, Length 6,467 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-201ENST00000267970 DISC1Q9NRI5 854 aa18.37■□□□□ 0.53
TSPAN3-201ENST00000267970 INTS9Q9NV88 658 aaKnown RBP18.37■□□□□ 0.53
TSPAN3-201ENST00000267970 TCP10L2B9ZVM9 353 aa18.37■□□□□ 0.53
TSPAN3-201ENST00000267970 UBAP1LF5GYI3 381 aa18.37■□□□□ 0.53
TSPAN3-201ENST00000267970 BCAMP50895 628 aa18.37■□□□□ 0.53
TSPAN3-201ENST00000267970 CADPS2Q86UW7 1296 aa18.37■□□□□ 0.53
TSPAN3-201ENST00000267970 KRT3P12035 628 aa18.37■□□□□ 0.53
TSPAN3-201ENST00000267970 CCDC84Q86UT8 332 aaPredicted RBP18.37■□□□□ 0.53
TSPAN3-201ENST00000267970 CYTH2Q99418 400 aa18.37■□□□□ 0.53
TSPAN3-201ENST00000267970 PCIF1Q9H4Z3 704 aa18.37■□□□□ 0.53
TSPAN3-201ENST00000267970 PLTPP55058 493 aa18.36■□□□□ 0.53
TSPAN3-201ENST00000267970 GTF2IP78347 998 aa18.36■□□□□ 0.53
TSPAN3-201ENST00000267970 HVCN1Q96D96 273 aa18.36■□□□□ 0.53
TSPAN3-201ENST00000267970 RTEL1Q9NZ71 1219 aa18.36■□□□□ 0.53
TSPAN3-201ENST00000267970 CLIC2O15247 247 aa18.36■□□□□ 0.53
TSPAN3-201ENST00000267970 OATP04181 439 aa18.36■□□□□ 0.53
TSPAN3-201ENST00000267970 CDC25AP30304 524 aa18.36■□□□□ 0.53
TSPAN3-201ENST00000267970 PIK3CAP42336 1068 aa18.36■□□□□ 0.53
TSPAN3-201ENST00000267970 ZNF449Q6P9G9 518 aa18.36■□□□□ 0.53
TSPAN3-201ENST00000267970 USP40Q9NVE5 1235 aa18.36■□□□□ 0.53
TSPAN3-201ENST00000267970 DDX25Q9UHL0 483 aaKnown RBP18.36■□□□□ 0.53
TSPAN3-201ENST00000267970 MTMR6Q9Y217 621 aa18.36■□□□□ 0.53
TSPAN3-201ENST00000267970 IVNS1ABPQ9Y6Y0 642 aa18.36■□□□□ 0.53
TSPAN3-201ENST00000267970 HDLBPQ00341 1268 aaKnown RBP18.36■□□□□ 0.53
TSPAN3-201ENST00000267970 DOK7Q18PE1 504 aa18.36■□□□□ 0.53
TSPAN3-201ENST00000267970 TCP11X2Q5H9J9 407 aa18.36■□□□□ 0.53
TSPAN3-201ENST00000267970 PPP4R4Q6NUP7 873 aa18.36■□□□□ 0.53
TSPAN3-201ENST00000267970 BLIDQ8IZY5 108 aa18.36■□□□□ 0.53
TSPAN3-201ENST00000267970 MARCH10Q8NA82 808 aaPredicted RBP18.36■□□□□ 0.53
TSPAN3-201ENST00000267970 GOLGA5Q8TBA6 731 aa18.36■□□□□ 0.53
TSPAN3-201ENST00000267970 SCRN1Q12765 414 aa18.36■□□□□ 0.53
TSPAN3-201ENST00000267970 PCDHA12Q9UN75 941 aa18.36■□□□□ 0.53
TSPAN3-201ENST00000267970 EPN1Q9Y6I3 576 aaPredicted RBP18.36■□□□□ 0.53
TSPAN3-201ENST00000267970 DNM2P50570 870 aa18.36■□□□□ 0.53
TSPAN3-201ENST00000267970 CCNL1Q9UK58 526 aaPredicted RBP18.36■□□□□ 0.53
TSPAN3-201ENST00000267970 CFAP36Q96G28 342 aa18.35■□□□□ 0.53
TSPAN3-201ENST00000267970 CNOT6LQ96LI5 555 aaKnown RBP18.35■□□□□ 0.53
TSPAN3-201ENST00000267970 ZSCAN10Q96SZ4 725 aaPredicted RBP18.35■□□□□ 0.53
TSPAN3-201ENST00000267970 SPATS2LQ9NUQ6 558 aaKnown RBP18.35■□□□□ 0.53
TSPAN3-201ENST00000267970 FRMD4AQ9P2Q2 1039 aaPredicted RBP18.35■□□□□ 0.53
TSPAN3-201ENST00000267970 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.35■□□□□ 0.53
TSPAN3-201ENST00000267970 CFLARO15519 480 aa18.35■□□□□ 0.53
TSPAN3-201ENST00000267970 SART1O43290 800 aaKnown RBP18.35■□□□□ 0.53
TSPAN3-201ENST00000267970 PTGDRQ13258 359 aa18.35■□□□□ 0.53
TSPAN3-201ENST00000267970 POLA2Q14181 598 aa18.35■□□□□ 0.53
TSPAN3-201ENST00000267970 AP1M1Q9BXS5 423 aa18.35■□□□□ 0.53
TSPAN3-201ENST00000267970 PSTPIP2Q9H939 334 aa18.35■□□□□ 0.53
TSPAN3-201ENST00000267970 POLR3AO14802 1390 aaPredicted RBP18.35■□□□□ 0.53
TSPAN3-201ENST00000267970 XPO5Q9HAV4 1204 aaKnown RBP eCLIP18.35■□□□□ 0.53
TSPAN3-201ENST00000267970 UBN2Q6ZU65 1347 aa18.35■□□□□ 0.53
TSPAN3-201ENST00000267970 TOP2BQ02880 1626 aa18.35■□□□□ 0.53
TSPAN3-201ENST00000267970 SMAD1Q15797 465 aaKnown RBP18.35■□□□□ 0.53
TSPAN3-201ENST00000267970 ADCK5Q3MIX3 580 aa18.35■□□□□ 0.53
TSPAN3-201ENST00000267970 GABPB2Q8TAK5 448 aaPredicted RBP18.35■□□□□ 0.53
TSPAN3-201ENST00000267970 LPIN2Q92539 896 aa18.35■□□□□ 0.53
TSPAN3-201ENST00000267970 MAGOHBQ96A72 148 aaKnown RBP18.35■□□□□ 0.53
TSPAN3-201ENST00000267970 ARMCX3Q9UH62 379 aaPredicted RBP18.35■□□□□ 0.53
TSPAN3-201ENST00000267970 SH3TC1Q8TE82 1336 aa18.35■□□□□ 0.53
TSPAN3-201ENST00000267970 HAUS1Q96CS2 278 aa18.34■□□□□ 0.53
TSPAN3-201ENST00000267970 MRC2Q9UBG0 1479 aa18.34■□□□□ 0.53
TSPAN3-201ENST00000267970 A6NNZ2 444 aa18.34■□□□□ 0.53
TSPAN3-201ENST00000267970 MEIS1O00470 390 aa18.34■□□□□ 0.53
TSPAN3-201ENST00000267970 TUBB8Q3ZCM7 444 aa18.34■□□□□ 0.53
TSPAN3-201ENST00000267970 NLRX1Q86UT6 975 aa18.34■□□□□ 0.53
TSPAN3-201ENST00000267970 ARMCX5Q6P1M9 558 aa18.34■□□□□ 0.53
TSPAN3-201ENST00000267970 TRMT10CQ7L0Y3 403 aaKnown RBP18.34■□□□□ 0.53
TSPAN3-201ENST00000267970 LARGE2Q8N3Y3 721 aa18.34■□□□□ 0.53
TSPAN3-201ENST00000267970 RNF217Q8TC41 542 aa18.34■□□□□ 0.53
TSPAN3-201ENST00000267970 MLXIPQ9HAP2 919 aa18.34■□□□□ 0.53
TSPAN3-201ENST00000267970 SLC24A3Q9HC58 644 aa18.34■□□□□ 0.53
TSPAN3-201ENST00000267970 GNGT2O14610 69 aa18.34■□□□□ 0.53
TSPAN3-201ENST00000267970 LRRC24Q50LG9 513 aa18.34■□□□□ 0.53
TSPAN3-201ENST00000267970 PCDH11XQ9BZA7 1347 aa18.34■□□□□ 0.53
TSPAN3-201ENST00000267970 PCDH11YQ9BZA8 1340 aa18.34■□□□□ 0.53
TSPAN3-201ENST00000267970 COPB1P53618 953 aaKnown RBP18.34■□□□□ 0.53
TSPAN3-201ENST00000267970 ETF1P62495 437 aaKnown RBP18.34■□□□□ 0.53
TSPAN3-201ENST00000267970 SPICE1Q8N0Z3 855 aa18.34■□□□□ 0.53
TSPAN3-201ENST00000267970 LRRIQ4A6NIV6 560 aa18.33■□□□□ 0.53
TSPAN3-201ENST00000267970 GCKRQ14397 625 aa18.33■□□□□ 0.53
TSPAN3-201ENST00000267970 Q3C1V9 767 aa18.33■□□□□ 0.53
TSPAN3-201ENST00000267970 DPCR1Q3MIW9 517 aa18.33■□□□□ 0.53
TSPAN3-201ENST00000267970 HABP4Q5JVS0 413 aaKnown RBP18.33■□□□□ 0.53
TSPAN3-201ENST00000267970 SPTLC3Q9NUV7 552 aa18.33■□□□□ 0.53
TSPAN3-201ENST00000267970 IQGAP2Q13576 1575 aa18.33■□□□□ 0.53
TSPAN3-201ENST00000267970 PDE1BQ01064 536 aa18.33■□□□□ 0.53
TSPAN3-201ENST00000267970 CDC26Q8NHZ8 85 aa18.33■□□□□ 0.53
TSPAN3-201ENST00000267970 GRK7Q8WTQ7 553 aa18.33■□□□□ 0.53
TSPAN3-201ENST00000267970 TOM1L1O75674 476 aa18.33■□□□□ 0.52
TSPAN3-201ENST00000267970 PLCB4Q15147 1175 aa18.33■□□□□ 0.52
TSPAN3-201ENST00000267970 CROCCP2Q86T23 111 aa18.33■□□□□ 0.52
TSPAN3-201ENST00000267970 CCDC197Q8NCU1 140 aa18.33■□□□□ 0.52
TSPAN3-201ENST00000267970 C1orf112Q9NSG2 853 aa18.33■□□□□ 0.52
TSPAN3-201ENST00000267970 CD2BP2O95400 341 aaKnown RBP18.33■□□□□ 0.52
TSPAN3-201ENST00000267970 EAPPQ56P03 285 aaPredicted RBP18.33■□□□□ 0.52
TSPAN3-201ENST00000267970 WDR3Q9UNX4 943 aaKnown RBP eCLIP18.33■□□□□ 0.52
TSPAN3-201ENST00000267970 PCDHB4Q9Y5E5 795 aa18.33■□□□□ 0.52
TSPAN3-201ENST00000267970 INHBAP08476 426 aa18.32■□□□□ 0.52
TSPAN3-201ENST00000267970 EEF1B2P24534 225 aaKnown RBP18.32■□□□□ 0.52
TSPAN3-201ENST00000267970 HADHQ16836 314 aaKnown RBP18.32■□□□□ 0.52
TSPAN3-201ENST00000267970 FAM178BQ8IXR5 827 aa18.32■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms