RNA–Protein interactions for RNA: ENST00000266880.11

CHFR-201, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 2 BASIC

Gene CHFR, Length 11,133 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-201ENST00000266880 CCDC15Q0P6D6 951 aa12.14□□□□□ -0.47
CHFR-201ENST00000266880 SEPT2Q15019 361 aa12.14□□□□□ -0.47
CHFR-201ENST00000266880 SESTD1Q86VW0 696 aa12.14□□□□□ -0.47
CHFR-201ENST00000266880 RASSF7Q02833 373 aa12.14□□□□□ -0.47
CHFR-201ENST00000266880 SEMA3FQ13275 785 aa12.14□□□□□ -0.47
CHFR-201ENST00000266880 ATP6V1E2Q96A05 226 aa12.14□□□□□ -0.47
CHFR-201ENST00000266880 IPO11Q9UI26 975 aaKnown RBP12.14□□□□□ -0.47
CHFR-201ENST00000266880 MBD4O95243 580 aa12.14□□□□□ -0.47
CHFR-201ENST00000266880 V9GY48 417 aaPredicted RBP12.14□□□□□ -0.47
CHFR-201ENST00000266880 HABP4Q5JVS0 413 aaKnown RBP12.13□□□□□ -0.47
CHFR-201ENST00000266880 ANKRD13DQ6ZTN6 518 aa12.13□□□□□ -0.47
CHFR-201ENST00000266880 GRM8O00222 908 aa12.13□□□□□ -0.47
CHFR-201ENST00000266880 PYGLP06737 847 aa12.13□□□□□ -0.47
CHFR-201ENST00000266880 GYS2P54840 703 aa12.13□□□□□ -0.47
CHFR-201ENST00000266880 MECOMQ03112 1051 aa12.13□□□□□ -0.47
CHFR-201ENST00000266880 EPB41L5Q9HCM4 733 aa12.13□□□□□ -0.47
CHFR-201ENST00000266880 MSH6P52701 1360 aa12.13□□□□□ -0.47
CHFR-201ENST00000266880 NR1H4Q96RI1 486 aaPredicted RBP12.13□□□□□ -0.47
CHFR-201ENST00000266880 COBLO75128 1261 aa12.13□□□□□ -0.47
CHFR-201ENST00000266880 CCDC84Q86UT8 332 aaPredicted RBP12.13□□□□□ -0.47
CHFR-201ENST00000266880 COG4Q9H9E3 785 aa12.13□□□□□ -0.47
CHFR-201ENST00000266880 TMEM63CQ9P1W3 806 aa12.13□□□□□ -0.47
CHFR-201ENST00000266880 OLFML1Q6UWY5 402 aa12.13□□□□□ -0.47
CHFR-201ENST00000266880 BBOF1Q8ND07 529 aa12.13□□□□□ -0.47
CHFR-201ENST00000266880 SH2D4AQ9H788 454 aa12.13□□□□□ -0.47
CHFR-201ENST00000266880 KCNJ14Q9UNX9 436 aa12.13□□□□□ -0.47
CHFR-201ENST00000266880 DEXIO95424 95 aa12.13□□□□□ -0.47
CHFR-201ENST00000266880 C1orf146Q5VVC0 180 aa12.13□□□□□ -0.47
CHFR-201ENST00000266880 RFX6Q8HWS3 928 aa12.13□□□□□ -0.47
CHFR-201ENST00000266880 MRPL50Q8N5N7 158 aaKnown RBP12.13□□□□□ -0.47
CHFR-201ENST00000266880 DNM3Q9UQ16 869 aa12.13□□□□□ -0.47
CHFR-201ENST00000266880 CCDC195A0A1B0GUA6 201 aa12.13□□□□□ -0.47
CHFR-201ENST00000266880 NOP56O00567 594 aaKnown RBP12.13□□□□□ -0.47
CHFR-201ENST00000266880 P4HA1P13674 534 aa12.13□□□□□ -0.47
CHFR-201ENST00000266880 EIF6P56537 245 aaKnown RBP12.13□□□□□ -0.47
CHFR-201ENST00000266880 TRIP13Q15645 432 aaPredicted RBP12.13□□□□□ -0.47
CHFR-201ENST00000266880 FAM180AQ6UWF9 173 aa12.13□□□□□ -0.47
CHFR-201ENST00000266880 SLC13A4Q9UKG4 626 aa12.13□□□□□ -0.47
CHFR-201ENST00000266880 KDRP35968 1356 aa12.13□□□□□ -0.47
CHFR-201ENST00000266880 LRRC8AQ8IWT6 810 aa12.13□□□□□ -0.47
CHFR-201ENST00000266880 LLPHQ9BRT6 129 aaKnown RBP12.12□□□□□ -0.47
CHFR-201ENST00000266880 MYL10Q9BUA6 226 aa12.12□□□□□ -0.47
CHFR-201ENST00000266880 ZNF148Q9UQR1 794 aa12.12□□□□□ -0.47
CHFR-201ENST00000266880 ANKRD65E5RJM6 399 aa12.12□□□□□ -0.47
CHFR-201ENST00000266880 PLCG2P16885 1265 aa12.12□□□□□ -0.47
CHFR-201ENST00000266880 YWHAEP62258 255 aaKnown RBP12.12□□□□□ -0.47
CHFR-201ENST00000266880 EP400NLQ6ZTU2 488 aa12.12□□□□□ -0.47
CHFR-201ENST00000266880 SERPINI1Q99574 410 aa12.12□□□□□ -0.47
CHFR-201ENST00000266880 CXCR5P32302 372 aa12.12□□□□□ -0.47
CHFR-201ENST00000266880 IL15P40933 162 aaPredicted RBP12.12□□□□□ -0.47
CHFR-201ENST00000266880 RWDD2BP57060 319 aa12.12□□□□□ -0.47
CHFR-201ENST00000266880 COQ7Q99807 217 aa12.12□□□□□ -0.47
CHFR-201ENST00000266880 INPP5FQ9Y2H2 1132 aa12.12□□□□□ -0.47
CHFR-201ENST00000266880 NR1D1P20393 614 aa12.12□□□□□ -0.47
CHFR-201ENST00000266880 RASSF10A6NK89 507 aa12.12□□□□□ -0.47
CHFR-201ENST00000266880 DDX17Q92841 729 aaKnown RBP12.12□□□□□ -0.47
CHFR-201ENST00000266880 DDX42Q86XP3 938 aaKnown RBP eCLIP12.12□□□□□ -0.47
CHFR-201ENST00000266880 CDKL2Q92772 493 aa12.12□□□□□ -0.47
CHFR-201ENST00000266880 UPF3AQ9H1J1 476 aaKnown RBP12.12□□□□□ -0.47
CHFR-201ENST00000266880 NR1I2O75469 434 aa12.12□□□□□ -0.47
CHFR-201ENST00000266880 PARD3BQ8TEW8 1205 aa12.12□□□□□ -0.47
CHFR-201ENST00000266880 PPARGC1AQ9UBK2 798 aaKnown RBP12.12□□□□□ -0.47
CHFR-201ENST00000266880 HEXIM1O94992 359 aaKnown RBP12.12□□□□□ -0.47
CHFR-201ENST00000266880 CEP85Q6P2H3 762 aa12.12□□□□□ -0.47
CHFR-201ENST00000266880 EXOC4Q96A65 974 aa12.12□□□□□ -0.47
CHFR-201ENST00000266880 ZFYVE19Q96K21 471 aa12.12□□□□□ -0.47
CHFR-201ENST00000266880 JAK2O60674 1132 aa12.11□□□□□ -0.47
CHFR-201ENST00000266880 MT-ND3P03897 115 aa12.11□□□□□ -0.47
CHFR-201ENST00000266880 HSPA8P11142 646 aaKnown RBP12.11□□□□□ -0.47
CHFR-201ENST00000266880 ADCY7P51828 1080 aa12.11□□□□□ -0.47
CHFR-201ENST00000266880 EPHB4P54760 987 aa12.11□□□□□ -0.47
CHFR-201ENST00000266880 ZC3H12BQ5HYM0 836 aaKnown RBP12.11□□□□□ -0.47
CHFR-201ENST00000266880 SORBS3O60504 671 aa12.11□□□□□ -0.47
CHFR-201ENST00000266880 STAT1P42224 750 aa12.11□□□□□ -0.47
CHFR-201ENST00000266880 MYO1EQ12965 1108 aa12.11□□□□□ -0.47
CHFR-201ENST00000266880 CYB5RLQ6IPT4 315 aa12.11□□□□□ -0.47
CHFR-201ENST00000266880 CABP7Q86V35 215 aa12.11□□□□□ -0.47
CHFR-201ENST00000266880 TESK2Q96S53 571 aa12.11□□□□□ -0.47
CHFR-201ENST00000266880 NEUROG2Q9H2A3 272 aa12.11□□□□□ -0.47
CHFR-201ENST00000266880 PCDHB13Q9Y5F0 798 aa12.11□□□□□ -0.47
CHFR-201ENST00000266880 KRT75O95678 551 aa12.11□□□□□ -0.47
CHFR-201ENST00000266880 ESRRAP11474 423 aaPredicted RBP12.11□□□□□ -0.47
CHFR-201ENST00000266880 LLGL1Q15334 1064 aa12.11□□□□□ -0.47
CHFR-201ENST00000266880 GLE1Q53GS7 698 aaKnown RBP12.11□□□□□ -0.47
CHFR-201ENST00000266880 TUBB6Q9BUF5 446 aa12.11□□□□□ -0.47
CHFR-201ENST00000266880 GNA14O95837 355 aa12.11□□□□□ -0.47
CHFR-201ENST00000266880 KRT4P19013 534 aa12.11□□□□□ -0.47
CHFR-201ENST00000266880 ARHGDIAP52565 204 aa12.11□□□□□ -0.47
CHFR-201ENST00000266880 HNRNPH2P55795 449 aaKnown RBP12.11□□□□□ -0.47
CHFR-201ENST00000266880 SLC9A5Q14940 896 aa12.11□□□□□ -0.47
CHFR-201ENST00000266880 SLC35F6Q8N357 371 aa12.11□□□□□ -0.47
CHFR-201ENST00000266880 RDH13Q8NBN7 331 aa12.11□□□□□ -0.47
CHFR-201ENST00000266880 SERTAD1Q9UHV2 236 aa12.11□□□□□ -0.47
CHFR-201ENST00000266880 ZNF189O75820 626 aaPredicted RBP12.11□□□□□ -0.47
CHFR-201ENST00000266880 CATSPER3Q86XQ3 398 aa12.11□□□□□ -0.47
CHFR-201ENST00000266880 EXT2Q93063 718 aa12.11□□□□□ -0.47
CHFR-201ENST00000266880 A0A0G2JND7 137 aa12.11□□□□□ -0.47
CHFR-201ENST00000266880 E2F6O75461 281 aa12.11□□□□□ -0.47
CHFR-201ENST00000266880 MOCS3O95396 460 aa12.11□□□□□ -0.47
CHFR-201ENST00000266880 ACTN1P12814 892 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 83.4 ms