RNA–Protein interactions for RNA: ENST00000250448.2

FOXA1-201, Transcript of forkhead box A1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FOXA1, Length 2,862 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA1-201ENST00000250448 ATRIPQ8WXE1 791 aa19.12■□□□□ 0.65
FOXA1-201ENST00000250448 TDRD3Q9H7E2 651 aaKnown RBP19.12■□□□□ 0.65
FOXA1-201ENST00000250448 H3BQF6 201 aa19.12■□□□□ 0.65
FOXA1-201ENST00000250448 POTEB2H3BUK9 544 aa19.12■□□□□ 0.65
FOXA1-201ENST00000250448 C16orf86Q6ZW13 317 aa19.12■□□□□ 0.65
FOXA1-201ENST00000250448 CLEC10AQ8IUN9 316 aa19.12■□□□□ 0.65
FOXA1-201ENST00000250448 ZDHHC15Q96MV8 337 aa19.12■□□□□ 0.65
FOXA1-201ENST00000250448 PSMD1Q99460 953 aa19.12■□□□□ 0.65
FOXA1-201ENST00000250448 ANKZF1Q9H8Y5 726 aa19.12■□□□□ 0.65
FOXA1-201ENST00000250448 PUF60Q9UHX1 559 aaKnown RBP19.12■□□□□ 0.65
FOXA1-201ENST00000250448 ZNF646O15015 1829 aaPredicted RBP19.12■□□□□ 0.65
FOXA1-201ENST00000250448 KIF13BQ9NQT8 1826 aa19.12■□□□□ 0.65
FOXA1-201ENST00000250448 A0A087X0B3 334 aa19.11■□□□□ 0.65
FOXA1-201ENST00000250448 AFMP43652 599 aa19.11■□□□□ 0.65
FOXA1-201ENST00000250448 MTA3Q9BTC8 594 aa19.11■□□□□ 0.65
FOXA1-201ENST00000250448 CAPN2P17655 700 aa19.11■□□□□ 0.65
FOXA1-201ENST00000250448 RCAN1P53805 252 aa19.11■□□□□ 0.65
FOXA1-201ENST00000250448 NLGN2Q8NFZ4 835 aa19.11■□□□□ 0.65
FOXA1-201ENST00000250448 CTAGE1Q96RT6 745 aa19.11■□□□□ 0.65
FOXA1-201ENST00000250448 SGIP1Q9BQI5 828 aa19.11■□□□□ 0.65
FOXA1-201ENST00000250448 TRIM75PA6NK02 468 aa19.11■□□□□ 0.65
FOXA1-201ENST00000250448 FILIP1LQ4L180 1135 aa19.11■□□□□ 0.65
FOXA1-201ENST00000250448 ZNF569Q5MCW4 686 aa19.11■□□□□ 0.65
FOXA1-201ENST00000250448 SH3RF1Q7Z6J0 888 aa19.11■□□□□ 0.65
FOXA1-201ENST00000250448 HNRNPLLQ8WVV9 542 aaKnown RBP19.11■□□□□ 0.65
FOXA1-201ENST00000250448 PRMT6Q96LA8 375 aaPredicted RBP19.11■□□□□ 0.65
FOXA1-201ENST00000250448 PTGER2P43116 358 aa19.1■□□□□ 0.65
FOXA1-201ENST00000250448 RAD51AP2Q09MP3 1159 aa19.1■□□□□ 0.65
FOXA1-201ENST00000250448 TUBB2AQ13885 445 aa19.1■□□□□ 0.65
FOXA1-201ENST00000250448 MSANTD4Q8NCY6 345 aa19.1■□□□□ 0.65
FOXA1-201ENST00000250448 EXOC4Q96A65 974 aa19.1■□□□□ 0.65
FOXA1-201ENST00000250448 PAGE5Q96GU1 130 aa19.1■□□□□ 0.65
FOXA1-201ENST00000250448 TUBB2BQ9BVA1 445 aa19.1■□□□□ 0.65
FOXA1-201ENST00000250448 FAM205CA6NFA0 338 aa19.1■□□□□ 0.65
FOXA1-201ENST00000250448 EIF6P56537 245 aaKnown RBP19.1■□□□□ 0.65
FOXA1-201ENST00000250448 CNGA4Q8IV77 575 aa19.1■□□□□ 0.65
FOXA1-201ENST00000250448 EPSTI1Q96J88 318 aa19.1■□□□□ 0.65
FOXA1-201ENST00000250448 TRERF1Q96PN7 1200 aa19.1■□□□□ 0.65
FOXA1-201ENST00000250448 PSD3Q9NYI0 1048 aa19.1■□□□□ 0.65
FOXA1-201ENST00000250448 RAB21Q9UL25 225 aa19.1■□□□□ 0.65
FOXA1-201ENST00000250448 CASP1P29466 404 aa19.09■□□□□ 0.65
FOXA1-201ENST00000250448 CASP14P31944 242 aa19.09■□□□□ 0.65
FOXA1-201ENST00000250448 CCDC51Q96ER9 411 aa19.09■□□□□ 0.65
FOXA1-201ENST00000250448 KAT14Q9H8E8 782 aa19.09■□□□□ 0.65
FOXA1-201ENST00000250448 FOCADQ5VW36 1801 aa19.09■□□□□ 0.65
FOXA1-201ENST00000250448 FECHP22830 423 aa19.09■□□□□ 0.65
FOXA1-201ENST00000250448 GYS2P54840 703 aa19.09■□□□□ 0.65
FOXA1-201ENST00000250448 KIF4BQ2VIQ3 1234 aa19.09■□□□□ 0.65
FOXA1-201ENST00000250448 BEND6Q5SZJ8 279 aaPredicted RBP19.09■□□□□ 0.65
FOXA1-201ENST00000250448 ZSCAN29Q8IWY8 852 aaPredicted RBP19.09■□□□□ 0.65
FOXA1-201ENST00000250448 FAM198AQ9UFP1 575 aa19.09■□□□□ 0.65
FOXA1-201ENST00000250448 MYH8P13535 1937 aa19.09■□□□□ 0.65
FOXA1-201ENST00000250448 ITIH6Q6UXX5 1313 aa19.08■□□□□ 0.65
FOXA1-201ENST00000250448 CTAGE9A4FU28 777 aa19.08■□□□□ 0.65
FOXA1-201ENST00000250448 DDTLA6NHG4 134 aaPredicted RBP19.08■□□□□ 0.65
FOXA1-201ENST00000250448 GYPCP04921 128 aa19.08■□□□□ 0.65
FOXA1-201ENST00000250448 DPYDQ12882 1025 aa19.08■□□□□ 0.65
FOXA1-201ENST00000250448 SHROOM1Q2M3G4 852 aaPredicted RBP19.08■□□□□ 0.65
FOXA1-201ENST00000250448 PNMA1Q8ND90 353 aa19.08■□□□□ 0.65
FOXA1-201ENST00000250448 SYMPKQ92797 1274 aaKnown RBP19.08■□□□□ 0.65
FOXA1-201ENST00000250448 SHISA4Q96DD7 197 aa19.08■□□□□ 0.65
FOXA1-201ENST00000250448 PNKPQ96T60 521 aa19.08■□□□□ 0.65
FOXA1-201ENST00000250448 RNF26Q9BY78 433 aaPredicted RBP19.08■□□□□ 0.65
FOXA1-201ENST00000250448 ADAM21Q9UKJ8 722 aa19.08■□□□□ 0.65
FOXA1-201ENST00000250448 CLRN2A0PK11 232 aa19.08■□□□□ 0.64
FOXA1-201ENST00000250448 ZSCAN26Q16670 478 aa19.08■□□□□ 0.64
FOXA1-201ENST00000250448 RSBN1LQ6PCB5 846 aaPredicted RBP19.08■□□□□ 0.64
FOXA1-201ENST00000250448 NIM1KQ8IY84 436 aa19.08■□□□□ 0.64
FOXA1-201ENST00000250448 SMYD4Q8IYR2 804 aaPredicted RBP19.08■□□□□ 0.64
FOXA1-201ENST00000250448 SLC35F6Q8N357 371 aa19.08■□□□□ 0.64
FOXA1-201ENST00000250448 GSDMAQ96QA5 445 aa19.08■□□□□ 0.64
FOXA1-201ENST00000250448 V9GY48 417 aaPredicted RBP19.08■□□□□ 0.64
FOXA1-201ENST00000250448 SHTN1A0MZ66 631 aa19.07■□□□□ 0.64
FOXA1-201ENST00000250448 PPP1R3GB7ZBB8 358 aa19.07■□□□□ 0.64
FOXA1-201ENST00000250448 NFKBIEO00221 500 aa19.07■□□□□ 0.64
FOXA1-201ENST00000250448 ERLIN1O75477 346 aa19.07■□□□□ 0.64
FOXA1-201ENST00000250448 AKR1B1P15121 316 aa19.07■□□□□ 0.64
FOXA1-201ENST00000250448 FXR1P51114 621 aaKnown RBP eCLIP19.07■□□□□ 0.64
FOXA1-201ENST00000250448 RASSF7Q02833 373 aa19.07■□□□□ 0.64
FOXA1-201ENST00000250448 HDXQ7Z353 690 aa19.07■□□□□ 0.64
FOXA1-201ENST00000250448 STAG2Q8N3U4 1231 aa19.07■□□□□ 0.64
FOXA1-201ENST00000250448 CEP95Q96GE4 821 aa19.07■□□□□ 0.64
FOXA1-201ENST00000250448 TSPYL1Q9H0U9 437 aa19.07■□□□□ 0.64
FOXA1-201ENST00000250448 SCAF8Q9UPN6 1271 aaKnown RBP19.07■□□□□ 0.64
FOXA1-201ENST00000250448 FKBP1AP62942 108 aaKnown RBP19.07■□□□□ 0.64
FOXA1-201ENST00000250448 TUBB4BP68371 445 aa19.07■□□□□ 0.64
FOXA1-201ENST00000250448 SRBD1Q8N5C6 995 aaKnown RBP19.07■□□□□ 0.64
FOXA1-201ENST00000250448 ACRBPQ8NEB7 543 aa19.07■□□□□ 0.64
FOXA1-201ENST00000250448 TMEM47Q9BQJ4 181 aa19.07■□□□□ 0.64
FOXA1-201ENST00000250448 TAOK3Q9H2K8 898 aa19.07■□□□□ 0.64
FOXA1-201ENST00000250448 CPVLQ9H3G5 476 aa19.07■□□□□ 0.64
FOXA1-201ENST00000250448 SERPINB13Q9UIV8 391 aa19.07■□□□□ 0.64
FOXA1-201ENST00000250448 SERPINA10Q9UK55 444 aa19.07■□□□□ 0.64
FOXA1-201ENST00000250448 CTNND2Q9UQB3 1225 aa19.07■□□□□ 0.64
FOXA1-201ENST00000250448 GOLGA8HP0CJ92 632 aa19.07■□□□□ 0.64
FOXA1-201ENST00000250448 VEGFAP15692 232 aaPredicted RBP19.07■□□□□ 0.64
FOXA1-201ENST00000250448 KRT2P35908 639 aa19.07■□□□□ 0.64
FOXA1-201ENST00000250448 LMAN1P49257 510 aa19.07■□□□□ 0.64
FOXA1-201ENST00000250448 AKAP17AQ02040 695 aaKnown RBP19.07■□□□□ 0.64
FOXA1-201ENST00000250448 SH3BP5LQ7L8J4 393 aa19.07■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 61.4 ms