RNA–Protein interactions for RNA: ENST00000233242.5

APOB-201, Transcript of apolipoprotein B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene APOB, Length 14,121 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOB-201ENST00000233242 GADD45GIP1Q8TAE8 222 aaPredicted RBP8.95□□□□□ -0.98
APOB-201ENST00000233242 TRPM2O94759 1503 aa8.95□□□□□ -0.98
APOB-201ENST00000233242 RBL2Q08999 1139 aa8.95□□□□□ -0.98
APOB-201ENST00000233242 MRPL40Q9NQ50 206 aaKnown RBP8.95□□□□□ -0.98
APOB-201ENST00000233242 KCNJ14Q9UNX9 436 aa8.95□□□□□ -0.98
APOB-201ENST00000233242 CARMIL3Q8ND23 1372 aa8.95□□□□□ -0.98
APOB-201ENST00000233242 ABCC12Q96J65 1359 aa8.95□□□□□ -0.98
APOB-201ENST00000233242 DAPK3O43293 454 aa8.95□□□□□ -0.98
APOB-201ENST00000233242 TRMT2AQ8IZ69 625 aaKnown RBP8.95□□□□□ -0.98
APOB-201ENST00000233242 ARHGAP31Q2M1Z3 1444 aa8.95□□□□□ -0.98
APOB-201ENST00000233242 JADE1Q6IE81 842 aa8.95□□□□□ -0.98
APOB-201ENST00000233242 CD109Q6YHK3 1445 aa8.95□□□□□ -0.98
APOB-201ENST00000233242 IFNAR2P48551 515 aa8.95□□□□□ -0.98
APOB-201ENST00000233242 EXOC3L4Q17RC7 722 aa8.95□□□□□ -0.98
APOB-201ENST00000233242 FAM133BQ5BKY9 247 aaKnown RBP8.95□□□□□ -0.98
APOB-201ENST00000233242 ZC3H18Q86VM9 953 aaKnown RBP8.95□□□□□ -0.98
APOB-201ENST00000233242 ARHGEF10O15013 1369 aa8.95□□□□□ -0.98
APOB-201ENST00000233242 MED23Q9ULK4 1368 aa8.95□□□□□ -0.98
APOB-201ENST00000233242 BACH1O14867 736 aa8.95□□□□□ -0.98
APOB-201ENST00000233242 IL13P35225 146 aa8.95□□□□□ -0.98
APOB-201ENST00000233242 RASSF7Q02833 373 aa8.95□□□□□ -0.98
APOB-201ENST00000233242 SLFN12Q8IYM2 578 aa8.95□□□□□ -0.98
APOB-201ENST00000233242 ZC4H2Q9NQZ6 224 aa8.95□□□□□ -0.98
APOB-201ENST00000233242 MID2Q9UJV3 735 aa8.95□□□□□ -0.98
APOB-201ENST00000233242 STAM2O75886 525 aa8.95□□□□□ -0.98
APOB-201ENST00000233242 CCDC117Q8IWD4 279 aaPredicted RBP8.95□□□□□ -0.98
APOB-201ENST00000233242 ATP8A2Q9NTI2 1148 aa8.95□□□□□ -0.98
APOB-201ENST00000233242 ATP8A1Q9Y2Q0 1164 aa8.95□□□□□ -0.98
APOB-201ENST00000233242 HNRNPCL1O60812 293 aaKnown RBP8.95□□□□□ -0.98
APOB-201ENST00000233242 CD2APQ9Y5K6 639 aa8.95□□□□□ -0.98
APOB-201ENST00000233242 ERBB4Q15303 1308 aa8.95□□□□□ -0.98
APOB-201ENST00000233242 RAPGEF6Q8TEU7 1601 aa8.95□□□□□ -0.98
APOB-201ENST00000233242 DPH6Q7L8W6 267 aa8.95□□□□□ -0.98
APOB-201ENST00000233242 HAUS7Q99871 368 aa8.95□□□□□ -0.98
APOB-201ENST00000233242 EEF1DP29692 281 aaKnown RBP8.95□□□□□ -0.98
APOB-201ENST00000233242 MKRN3Q13064 507 aaKnown RBP8.95□□□□□ -0.98
APOB-201ENST00000233242 INPP1P49441 399 aa8.94□□□□□ -0.98
APOB-201ENST00000233242 PSMD7P51665 324 aa8.94□□□□□ -0.98
APOB-201ENST00000233242 GRAMD4Q6IC98 578 aa8.94□□□□□ -0.98
APOB-201ENST00000233242 ZNF654Q8IZM8 581 aa8.94□□□□□ -0.98
APOB-201ENST00000233242 ZCRB1Q8TBF4 217 aaKnown RBP8.94□□□□□ -0.98
APOB-201ENST00000233242 OSBPL9Q96SU4 736 aa8.94□□□□□ -0.98
APOB-201ENST00000233242 MMEL1Q495T6 779 aa8.94□□□□□ -0.98
APOB-201ENST00000233242 GPBP1Q86WP2 473 aa8.94□□□□□ -0.98
APOB-201ENST00000233242 BLIDQ8IZY5 108 aa8.94□□□□□ -0.98
APOB-201ENST00000233242 MROH5Q6ZUA9 1318 aa8.94□□□□□ -0.98
APOB-201ENST00000233242 MAN2A1Q16706 1144 aa8.94□□□□□ -0.98
APOB-201ENST00000233242 FAM212AQ96EL1 285 aa8.94□□□□□ -0.98
APOB-201ENST00000233242 CACYBPQ9HB71 228 aaKnown RBP8.94□□□□□ -0.98
APOB-201ENST00000233242 PSD3Q9NYI0 1048 aa8.94□□□□□ -0.98
APOB-201ENST00000233242 SRLQ86TD4 932 aa8.94□□□□□ -0.98
APOB-201ENST00000233242 C1orf112Q9NSG2 853 aa8.94□□□□□ -0.98
APOB-201ENST00000233242 GMNCA6NCL1 334 aa8.94□□□□□ -0.98
APOB-201ENST00000233242 GPC4O75487 556 aa8.94□□□□□ -0.98
APOB-201ENST00000233242 PLS1Q14651 629 aa8.94□□□□□ -0.98
APOB-201ENST00000233242 USTQ9Y2C2 406 aa8.94□□□□□ -0.98
APOB-201ENST00000233242 RNMTO43148 476 aaKnown RBP8.94□□□□□ -0.98
APOB-201ENST00000233242 KPNA2P52292 529 aaKnown RBP8.94□□□□□ -0.98
APOB-201ENST00000233242 NSMCE1Q8WV22 266 aa8.94□□□□□ -0.98
APOB-201ENST00000233242 COL4A3BPQ9Y5P4 624 aa8.94□□□□□ -0.98
APOB-201ENST00000233242 GRIN2AQ12879 1464 aa8.94□□□□□ -0.98
APOB-201ENST00000233242 ENC1O14682 589 aa8.94□□□□□ -0.98
APOB-201ENST00000233242 BFSP1Q12934 665 aa8.94□□□□□ -0.98
APOB-201ENST00000233242 PARP10Q53GL7 1025 aa8.94□□□□□ -0.98
APOB-201ENST00000233242 MUM1L1Q5H9M0 696 aa8.94□□□□□ -0.98
APOB-201ENST00000233242 ATG16L1Q676U5 607 aa8.94□□□□□ -0.98
APOB-201ENST00000233242 FANCBQ8NB91 859 aa8.94□□□□□ -0.98
APOB-201ENST00000233242 KLC4Q9NSK0 619 aa8.94□□□□□ -0.98
APOB-201ENST00000233242 POLR2BP30876 1174 aaKnown RBP8.94□□□□□ -0.98
APOB-201ENST00000233242 RCN2Q14257 317 aa8.94□□□□□ -0.98
APOB-201ENST00000233242 PFDN6O15212 129 aa8.94□□□□□ -0.98
APOB-201ENST00000233242 MFAP3LO75121 409 aa8.94□□□□□ -0.98
APOB-201ENST00000233242 PIP4K2CQ8TBX8 421 aa8.94□□□□□ -0.98
APOB-201ENST00000233242 SETDB2Q96T68 719 aa8.94□□□□□ -0.98
APOB-201ENST00000233242 TRIM15Q9C019 465 aa8.94□□□□□ -0.98
APOB-201ENST00000233242 PDIA3P30101 505 aaKnown RBP8.94□□□□□ -0.98
APOB-201ENST00000233242 NSFP46459 744 aaKnown RBP8.94□□□□□ -0.98
APOB-201ENST00000233242 NXNQ6DKJ4 435 aa8.94□□□□□ -0.98
APOB-201ENST00000233242 SYMPKQ92797 1274 aaKnown RBP8.94□□□□□ -0.98
APOB-201ENST00000233242 PLAAQ9Y263 795 aa8.94□□□□□ -0.98
APOB-201ENST00000233242 ABCB4P21439 1286 aa8.94□□□□□ -0.98
APOB-201ENST00000233242 LINC00301Q8NCQ3 95 aa8.94□□□□□ -0.98
APOB-201ENST00000233242 CSRNP1Q96S65 589 aa8.94□□□□□ -0.98
APOB-201ENST00000233242 FANCAO15360 1455 aa8.93□□□□□ -0.98
APOB-201ENST00000233242 MMEP08473 750 aa8.93□□□□□ -0.98
APOB-201ENST00000233242 PLTPP55058 493 aa8.93□□□□□ -0.98
APOB-201ENST00000233242 TEDDM1Q5T9Z0 273 aa8.93□□□□□ -0.98
APOB-201ENST00000233242 RSBN1LQ6PCB5 846 aaPredicted RBP8.93□□□□□ -0.98
APOB-201ENST00000233242 G2E3Q7L622 706 aa8.93□□□□□ -0.98
APOB-201ENST00000233242 MAP7D3Q8IWC1 876 aa8.93□□□□□ -0.98
APOB-201ENST00000233242 LPIN2Q92539 896 aa8.93□□□□□ -0.98
APOB-201ENST00000233242 WDR46O15213 610 aaKnown RBP8.93□□□□□ -0.98
APOB-201ENST00000233242 FOXO3O43524 673 aa8.93□□□□□ -0.98
APOB-201ENST00000233242 CAV1Q03135 178 aa8.93□□□□□ -0.98
APOB-201ENST00000233242 GCKRQ14397 625 aa8.93□□□□□ -0.98
APOB-201ENST00000233242 RINT1Q6NUQ1 792 aa8.93□□□□□ -0.98
APOB-201ENST00000233242 MORC4Q8TE76 937 aa8.93□□□□□ -0.98
APOB-201ENST00000233242 PPWD1Q96BP3 646 aaKnown RBP8.93□□□□□ -0.98
APOB-201ENST00000233242 IFT122Q9HBG6 1241 aa8.93□□□□□ -0.98
APOB-201ENST00000233242 SPARCL1Q14515 664 aa8.93□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms