RNA–Protein interactions for RNA: YFL008W

SMC1, Transcript of Subunit of the multiprotein cohesin complex, yeastyeast

Gene SMC1, Length 3,678 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SMC1YFL008W RPF2P36160 344 aaKnown RBP1.28□□□□□ -2.2
SMC1YFL008W RKM3P38222 552 aa1.28□□□□□ -2.2
SMC1YFL008W SPC97P38863 823 aa1.28□□□□□ -2.2
SMC1YFL008W SAW1P39735 261 aa1.28□□□□□ -2.2
SMC1YFL008W MAF1P41910 395 aa1.28□□□□□ -2.2
SMC1YFL008W SCD6P45978 349 aaKnown RBP RIP-Chip data1.28□□□□□ -2.2 RIP-Chip
SMC1YFL008W IML2P47031 731 aa1.28□□□□□ -2.2
SMC1YFL008W YPT11P48559 417 aa1.28□□□□□ -2.2
SMC1YFL008W SNO4Q04902 237 aa1.28□□□□□ -2.2
SMC1YFL008W HIM1Q06674 414 aa1.28□□□□□ -2.2
SMC1YFL008W HSP33Q08914 237 aaKnown RBP1.28□□□□□ -2.2
SMC1YFL008W HSP32Q08992 237 aa1.28□□□□□ -2.2
SMC1YFL008W SPT7P35177 1332 aa1.28□□□□□ -2.2
SMC1YFL008W AUS1Q08409 1394 aa1.28□□□□□ -2.2
SMC1YFL008W XRS2P33301 854 aa1.28□□□□□ -2.2
SMC1YFL008W RFS1P38234 210 aaKnown RBP1.28□□□□□ -2.2
SMC1YFL008W TIF5P38431 405 aaKnown RBP1.28□□□□□ -2.2
SMC1YFL008W BFA1P47113 574 aa1.28□□□□□ -2.2
SMC1YFL008W ORC5P50874 479 aa1.28□□□□□ -2.2
SMC1YFL008W STR3P53101 465 aaKnown RBP1.28□□□□□ -2.2
SMC1YFL008W MDR1P53258 950 aa1.28□□□□□ -2.2
SMC1YFL008W GTR1Q00582 310 aa1.28□□□□□ -2.2
SMC1YFL008W YSA1Q01976 231 aa1.28□□□□□ -2.2
SMC1YFL008W CRN1Q06440 651 aa1.28□□□□□ -2.2
SMC1YFL008W MCH4Q08268 501 aa1.28□□□□□ -2.2
SMC1YFL008W YBR298C-AQ8TGK4 73 aa1.28□□□□□ -2.2
SMC1YFL008W GAC1P28006 793 aa1.28□□□□□ -2.21
SMC1YFL008W NUP133P36161 1157 aa1.28□□□□□ -2.21
SMC1YFL008W TAF5P38129 798 aa1.28□□□□□ -2.21
SMC1YFL008W MFB1Q04922 465 aa1.28□□□□□ -2.21
SMC1YFL008W ATG26Q06321 1198 aa1.28□□□□□ -2.21
SMC1YFL008W CSR1Q06705 408 aaKnown RBP1.28□□□□□ -2.21
SMC1YFL008W RIX7Q07844 837 aaKnown RBP1.28□□□□□ -2.21
SMC1YFL008W THI20Q08224 551 aa1.28□□□□□ -2.21
SMC1YFL008W SLK19Q08581 821 aaKnown RBP1.28□□□□□ -2.21
SMC1YFL008W NMD4Q12129 218 aa1.28□□□□□ -2.21
SMC1YFL008W FAB1P34756 2278 aa1.28□□□□□ -2.21
SMC1YFL008W HNM1P19807 563 aa1.27□□□□□ -2.21
SMC1YFL008W OLE1P21147 510 aaKnown RBP1.27□□□□□ -2.21
SMC1YFL008W URE2P23202 354 aaKnown RBP1.27□□□□□ -2.21
SMC1YFL008W PUP3P25451 205 aaKnown RBP1.27□□□□□ -2.21
SMC1YFL008W PDB1P32473 366 aaKnown RBP1.27□□□□□ -2.21
SMC1YFL008W YOX1P34161 385 aa1.27□□□□□ -2.21
SMC1YFL008W YBR139WP38109 508 aa1.27□□□□□ -2.21
SMC1YFL008W TSC10P38342 320 aa1.27□□□□□ -2.21
SMC1YFL008W YNG2P38806 282 aaKnown RBP1.27□□□□□ -2.21
SMC1YFL008W ELO1P39540 310 aa1.27□□□□□ -2.21
SMC1YFL008W SAP185P40856 1058 aa1.27□□□□□ -2.21
SMC1YFL008W DIG1Q03063 452 aaKnown RBP1.27□□□□□ -2.21
SMC1YFL008W YDR109CQ04585 715 aa1.27□□□□□ -2.21
SMC1YFL008W SDH5Q08230 162 aa1.27□□□□□ -2.21
SMC1YFL008W ATP2P00830 511 aaKnown RBP1.27□□□□□ -2.21
SMC1YFL008W CBP1P07252 654 aa1.27□□□□□ -2.21
SMC1YFL008W YCR006CP25350 157 aa1.27□□□□□ -2.21
SMC1YFL008W RPT3P33298 428 aaKnown RBP1.27□□□□□ -2.21
SMC1YFL008W YJR154WP47181 346 aa1.27□□□□□ -2.21
SMC1YFL008W RBA50Q04418 439 aa1.27□□□□□ -2.21
SMC1YFL008W PDR8Q06149 701 aa1.27□□□□□ -2.21
SMC1YFL008W KEL3Q08979 651 aaPredicted RBP1.27□□□□□ -2.21
SMC1YFL008W COX17Q12287 69 aa1.27□□□□□ -2.21
SMC1YFL008W PEP4P07267 405 aaKnown RBP1.27□□□□□ -2.21
SMC1YFL008W SAC1P32368 623 aaKnown RBP1.27□□□□□ -2.21
SMC1YFL008W YMR124WP39523 943 aaKnown RBP1.27□□□□□ -2.21
SMC1YFL008W RPR2P40571 144 aa1.27□□□□□ -2.21
SMC1YFL008W RRT5P43607 289 aa1.27□□□□□ -2.21
SMC1YFL008W RMD8P43620 662 aa1.27□□□□□ -2.21
SMC1YFL008W CUL3P53202 744 aa1.27□□□□□ -2.21
SMC1YFL008W REG1Q00816 1014 aa1.27□□□□□ -2.21
SMC1YFL008W YMR317WQ04893 1140 aa1.27□□□□□ -2.21
SMC1YFL008W COQ9Q05779 260 aa1.27□□□□□ -2.21
SMC1YFL008W RKM5Q12367 367 aa1.27□□□□□ -2.21
SMC1YFL008W PUT2P07275 575 aa1.26□□□□□ -2.21
SMC1YFL008W SEC12P11655 471 aa1.26□□□□□ -2.21
SMC1YFL008W SEC63P14906 663 aa1.26□□□□□ -2.21
SMC1YFL008W PTP1P25044 335 aa1.26□□□□□ -2.21
SMC1YFL008W MUD2P36084 527 aaKnown RBP1.26□□□□□ -2.21
SMC1YFL008W IME4P41833 600 aa1.26□□□□□ -2.21
SMC1YFL008W RHO4Q00246 291 aa1.26□□□□□ -2.21
SMC1YFL008W MRPL13Q02204 264 aa1.26□□□□□ -2.21
SMC1YFL008W NUP53Q03790 475 aa1.26□□□□□ -2.21
SMC1YFL008W SWF1Q04629 336 aa1.26□□□□□ -2.21
SMC1YFL008W RPL15AP05748 204 aaKnown RBP1.26□□□□□ -2.21
SMC1YFL008W SUI3P09064 285 aaKnown RBP1.26□□□□□ -2.21
SMC1YFL008W RRN3P36070 627 aa1.26□□□□□ -2.21
SMC1YFL008W UIP3P39547 235 aa1.26□□□□□ -2.21
SMC1YFL008W YEL057CP39983 233 aa1.26□□□□□ -2.21
SMC1YFL008W YDL186WP48568 277 aa1.26□□□□□ -2.21
SMC1YFL008W YDR056CQ12025 205 aa1.26□□□□□ -2.21
SMC1YFL008W UBX3Q12229 455 aa1.26□□□□□ -2.21
SMC1YFL008W RAD52P06778 471 aaKnown RBP1.26□□□□□ -2.21
SMC1YFL008W PHO2P07269 559 aa1.26□□□□□ -2.21
SMC1YFL008W GID7P25569 745 aa1.26□□□□□ -2.21
SMC1YFL008W IMP2'P32351 346 aa1.26□□□□□ -2.21
SMC1YFL008W PKP1P40530 394 aa1.26□□□□□ -2.21
SMC1YFL008W SGN1P40561 250 aaKnown RBP RIP-Chip data1.26□□□□□ -2.21not detected
SMC1YFL008W RTS2P40962 232 aa1.26□□□□□ -2.21
SMC1YFL008W SPG5P42933 373 aa1.26□□□□□ -2.21
SMC1YFL008W AIM22P47051 409 aa1.26□□□□□ -2.21
SMC1YFL008W IZH1Q03419 316 aa1.26□□□□□ -2.21
SMC1YFL008W IRC3Q06683 689 aa1.26□□□□□ -2.21
Retrieved 100 of 5,963 RNA–protein pairs in 8.5 ms