RNA–Protein interactions for RNA: ENST00000642041.1

PHGDH-234, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 943 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-234ENST00000642041 ST3GAL1Q11201 340 aa19.89■□□□□ 0.77
PHGDH-234ENST00000642041 TRIM29Q14134 588 aa19.89■□□□□ 0.77
PHGDH-234ENST00000642041 IFIT1BQ5T764 474 aaKnown RBP19.89■□□□□ 0.77
PHGDH-234ENST00000642041 FOCADQ5VW36 1801 aa19.89■□□□□ 0.77
PHGDH-234ENST00000642041 ZNF396Q96N95 335 aaPredicted RBP19.89■□□□□ 0.77
PHGDH-234ENST00000642041 NUDT12Q9BQG2 462 aa19.89■□□□□ 0.77
PHGDH-234ENST00000642041 ELP1O95163 1332 aa19.88■□□□□ 0.77
PHGDH-234ENST00000642041 FLT1P17948 1338 aa19.88■□□□□ 0.77
PHGDH-234ENST00000642041 GOLGA8AA7E2F4 631 aa19.88■□□□□ 0.77
PHGDH-234ENST00000642041 LETM1O95202 739 aaPredicted RBP19.88■□□□□ 0.77
PHGDH-234ENST00000642041 IFNAR1P17181 557 aa19.88■□□□□ 0.77
PHGDH-234ENST00000642041 KIF5BP33176 963 aa19.88■□□□□ 0.77
PHGDH-234ENST00000642041 PABPC4Q13310 644 aaKnown RBP eCLIP19.88■□□□□ 0.77
PHGDH-234ENST00000642041 C9orf50Q5SZB4 431 aa19.88■□□□□ 0.77
PHGDH-234ENST00000642041 CHST3Q7LGC8 479 aa19.88■□□□□ 0.77
PHGDH-234ENST00000642041 BRAPQ7Z569 592 aa19.88■□□□□ 0.77
PHGDH-234ENST00000642041 TGFBRAP1Q8WUH2 860 aa19.88■□□□□ 0.77
PHGDH-234ENST00000642041 SOCS4Q8WXH5 440 aa19.88■□□□□ 0.77
PHGDH-234ENST00000642041 SENP6Q9GZR1 1112 aaPredicted RBP19.88■□□□□ 0.77
PHGDH-234ENST00000642041 MORF4L1Q9UBU8 362 aa19.88■□□□□ 0.77
PHGDH-234ENST00000642041 TSPY2A6NKD2 308 aa19.87■□□□□ 0.77
PHGDH-234ENST00000642041 CCND3P30281 292 aaPredicted RBP19.87■□□□□ 0.77
PHGDH-234ENST00000642041 CCT2P78371 535 aaKnown RBP19.87■□□□□ 0.77
PHGDH-234ENST00000642041 AKAP17AQ02040 695 aaKnown RBP19.87■□□□□ 0.77
PHGDH-234ENST00000642041 SSRP1Q08945 709 aaKnown RBP19.87■□□□□ 0.77
PHGDH-234ENST00000642041 PKP1Q13835 747 aa19.87■□□□□ 0.77
PHGDH-234ENST00000642041 RTN1Q16799 776 aa19.87■□□□□ 0.77
PHGDH-234ENST00000642041 IDI2Q9BXS1 227 aa19.87■□□□□ 0.77
PHGDH-234ENST00000642041 LMBRD1Q9NUN5 540 aa19.87■□□□□ 0.77
PHGDH-234ENST00000642041 ORC3Q9UBD5 711 aaPredicted RBP19.87■□□□□ 0.77
PHGDH-234ENST00000642041 BRPF3Q9ULD4 1205 aa19.87■□□□□ 0.77
PHGDH-234ENST00000642041 DOCK1Q14185 1865 aa19.87■□□□□ 0.77
PHGDH-234ENST00000642041 BDP1A6H8Y1 2624 aa19.87■□□□□ 0.77
PHGDH-234ENST00000642041 CDK5RAP2Q96SN8 1893 aa19.86■□□□□ 0.77
PHGDH-234ENST00000642041 TNKSO95271 1327 aa19.86■□□□□ 0.77
PHGDH-234ENST00000642041 ENTPD3O75355 529 aa19.86■□□□□ 0.77
PHGDH-234ENST00000642041 HLA-DOAP06340 250 aa19.86■□□□□ 0.77
PHGDH-234ENST00000642041 SEC23AQ15436 765 aa19.86■□□□□ 0.77
PHGDH-234ENST00000642041 MAPKAPK5Q8IW41 473 aa19.86■□□□□ 0.77
PHGDH-234ENST00000642041 USP38Q8NB14 1042 aa19.86■□□□□ 0.77
PHGDH-234ENST00000642041 FANCBQ8NB91 859 aa19.86■□□□□ 0.77
PHGDH-234ENST00000642041 C8orf76Q96K31 380 aa19.86■□□□□ 0.77
PHGDH-234ENST00000642041 LZTS2Q9BRK4 669 aa19.86■□□□□ 0.77
PHGDH-234ENST00000642041 ASCC2Q9H1I8 757 aaPredicted RBP19.86■□□□□ 0.77
PHGDH-234ENST00000642041 FRMD4AQ9P2Q2 1039 aaPredicted RBP19.86■□□□□ 0.77
PHGDH-234ENST00000642041 LTBP2Q14767 1821 aa19.86■□□□□ 0.77
PHGDH-234ENST00000642041 UBE2HP62256 183 aa19.85■□□□□ 0.77
PHGDH-234ENST00000642041 L1TD1Q5T7N2 865 aaKnown RBP19.85■□□□□ 0.77
PHGDH-234ENST00000642041 C16orf86Q6ZW13 317 aa19.85■□□□□ 0.77
PHGDH-234ENST00000642041 SH3BP5LQ7L8J4 393 aa19.85■□□□□ 0.77
PHGDH-234ENST00000642041 CCDC84Q86UT8 332 aaPredicted RBP19.85■□□□□ 0.77
PHGDH-234ENST00000642041 ZNF654Q8IZM8 581 aa19.85■□□□□ 0.77
PHGDH-234ENST00000642041 CTCFLQ8NI51 663 aaPredicted RBP19.85■□□□□ 0.77
PHGDH-234ENST00000642041 RNF26Q9BY78 433 aaPredicted RBP19.85■□□□□ 0.77
PHGDH-234ENST00000642041 PRPF40AO75400 957 aaKnown RBP19.84■□□□□ 0.77
PHGDH-234ENST00000642041 DEXIO95424 95 aa19.84■□□□□ 0.77
PHGDH-234ENST00000642041 PICALMQ13492 652 aa19.84■□□□□ 0.77
PHGDH-234ENST00000642041 SAFBQ15424 915 aaKnown RBP eCLIP19.84■□□□□ 0.77
PHGDH-234ENST00000642041 ZSCAN29Q8IWY8 852 aaPredicted RBP19.84■□□□□ 0.77
PHGDH-234ENST00000642041 FBXO18Q8NFZ0 1043 aa19.84■□□□□ 0.77
PHGDH-234ENST00000642041 CCDC17Q96LX7 622 aa19.84■□□□□ 0.77
PHGDH-234ENST00000642041 OSBPL5Q9H0X9 879 aaPredicted RBP19.84■□□□□ 0.77
PHGDH-234ENST00000642041 EHD4Q9H223 541 aa19.84■□□□□ 0.77
PHGDH-234ENST00000642041 CTDNEP1O95476 244 aa19.83■□□□□ 0.77
PHGDH-234ENST00000642041 TSPY3P0CV98 308 aa19.83■□□□□ 0.77
PHGDH-234ENST00000642041 TSPY8P0CW00 308 aa19.83■□□□□ 0.77
PHGDH-234ENST00000642041 SMARCA1P28370 1054 aa19.83■□□□□ 0.77
PHGDH-234ENST00000642041 ATN1P54259 1190 aaPredicted RBP19.83■□□□□ 0.77
PHGDH-234ENST00000642041 RTP1P59025 263 aa19.83■□□□□ 0.77
PHGDH-234ENST00000642041 SPP2Q13103 211 aa19.83■□□□□ 0.77
PHGDH-234ENST00000642041 ATXN2LQ8WWM7 1075 aaKnown RBP19.83■□□□□ 0.77
PHGDH-234ENST00000642041 USP6NLQ92738 828 aa19.83■□□□□ 0.77
PHGDH-234ENST00000642041 LOC285556D6RIA3 1793 aa19.83■□□□□ 0.76
PHGDH-234ENST00000642041 GOLGA6L4A6NEF3 574 aa19.82■□□□□ 0.76
PHGDH-234ENST00000642041 DDTLA6NHG4 134 aaPredicted RBP19.82■□□□□ 0.76
PHGDH-234ENST00000642041 SLURP2P0DP57 97 aa19.82■□□□□ 0.76
PHGDH-234ENST00000642041 MICU3Q86XE3 530 aa19.82■□□□□ 0.76
PHGDH-234ENST00000642041 FOXP4Q8IVH2 680 aaPredicted RBP19.82■□□□□ 0.76
PHGDH-234ENST00000642041 KAT14Q9H8E8 782 aa19.82■□□□□ 0.76
PHGDH-234ENST00000642041 BAZ2AQ9UIF9 1905 aaKnown RBP19.82■□□□□ 0.76
PHGDH-234ENST00000642041 JAK2O60674 1132 aa19.81■□□□□ 0.76
PHGDH-234ENST00000642041 HMGCS2P54868 508 aa19.81■□□□□ 0.76
PHGDH-234ENST00000642041 TFAP4Q01664 338 aa19.81■□□□□ 0.76
PHGDH-234ENST00000642041 ENAHQ8N8S7 591 aaPredicted RBP19.81■□□□□ 0.76
PHGDH-234ENST00000642041 ZNF280CQ8ND82 737 aa19.81■□□□□ 0.76
PHGDH-234ENST00000642041 NEDD1Q8NHV4 660 aa19.81■□□□□ 0.76
PHGDH-234ENST00000642041 DDX11Q96FC9 970 aa19.81■□□□□ 0.76
PHGDH-234ENST00000642041 MYH1P12882 1939 aa19.8■□□□□ 0.76
PHGDH-234ENST00000642041 SYNGAP1Q96PV0 1343 aa19.8■□□□□ 0.76
PHGDH-234ENST00000642041 TBC1D12O60347 775 aa19.8■□□□□ 0.76
PHGDH-234ENST00000642041 MAPK4P31152 587 aa19.8■□□□□ 0.76
PHGDH-234ENST00000642041 RGS2P41220 211 aa19.8■□□□□ 0.76
PHGDH-234ENST00000642041 GRIN2CQ14957 1233 aa19.8■□□□□ 0.76
PHGDH-234ENST00000642041 CCL14Q16627 93 aa19.8■□□□□ 0.76
PHGDH-234ENST00000642041 SH3D19Q5HYK7 790 aa19.8■□□□□ 0.76
PHGDH-234ENST00000642041 GPRC5AQ8NFJ5 357 aa19.8■□□□□ 0.76
PHGDH-234ENST00000642041 BADQ92934 168 aa19.8■□□□□ 0.76
PHGDH-234ENST00000642041 DDX4Q9NQI0 724 aaKnown RBP19.8■□□□□ 0.76
PHGDH-234ENST00000642041 SAP30BPQ9UHR5 308 aaKnown RBP19.8■□□□□ 0.76
PHGDH-234ENST00000642041 ARIH1Q9Y4X5 557 aaPredicted RBP19.8■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms