RNA–Protein interactions for RNA: ENST00000639470.1

COLCA2-207, Transcript of colorectal cancer associated 2, humanhuman

TSL 1 (best)

Gene COLCA2, Length 1,207 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA2-207ENST00000639470 MDM2Q00987 491 aaPredicted RBP19.35■□□□□ 0.69
COLCA2-207ENST00000639470 AKNAD1Q5T1N1 836 aa19.35■□□□□ 0.69
COLCA2-207ENST00000639470 CPVLQ9H3G5 476 aa19.35■□□□□ 0.69
COLCA2-207ENST00000639470 RNF146Q9NTX7 359 aa19.35■□□□□ 0.69
COLCA2-207ENST00000639470 ZHX1Q9UKY1 873 aaPredicted RBP19.35■□□□□ 0.69
COLCA2-207ENST00000639470 ZMYM6O95789 1325 aa19.34■□□□□ 0.69
COLCA2-207ENST00000639470 MYADML2A6NDP7 307 aa19.34■□□□□ 0.69
COLCA2-207ENST00000639470 ALAS1P13196 640 aa19.34■□□□□ 0.69
COLCA2-207ENST00000639470 COPB2P35606 906 aa19.34■□□□□ 0.69
COLCA2-207ENST00000639470 SKAP1Q86WV1 359 aa19.34■□□□□ 0.69
COLCA2-207ENST00000639470 ANKRD35Q8N283 1001 aa19.34■□□□□ 0.69
COLCA2-207ENST00000639470 XPNPEP3Q9NQH7 507 aa19.34■□□□□ 0.69
COLCA2-207ENST00000639470 ATP11BQ9Y2G3 1177 aa19.34■□□□□ 0.69
COLCA2-207ENST00000639470 DIS3Q9Y2L1 958 aaKnown RBP19.34■□□□□ 0.69
COLCA2-207ENST00000639470 ZNFX1Q9P2E3 1918 aaKnown RBP19.33■□□□□ 0.69
COLCA2-207ENST00000639470 SOWAHBA6NEL2 793 aa19.33■□□□□ 0.68
COLCA2-207ENST00000639470 TRIM60Q495X7 471 aa19.33■□□□□ 0.68
COLCA2-207ENST00000639470 FAM160B2Q86V87 743 aa19.33■□□□□ 0.68
COLCA2-207ENST00000639470 CHURC1Q8WUH1 139 aa19.33■□□□□ 0.68
COLCA2-207ENST00000639470 A1CFQ9NQ94 594 aaKnown RBP19.33■□□□□ 0.68
COLCA2-207ENST00000639470 KBTBD13C9JR72 458 aa19.32■□□□□ 0.68
COLCA2-207ENST00000639470 TOP1P11387 765 aaKnown RBP19.32■□□□□ 0.68
COLCA2-207ENST00000639470 TMEM63BQ5T3F8 832 aa19.32■□□□□ 0.68
COLCA2-207ENST00000639470 TTC22Q5TAA0 569 aa19.32■□□□□ 0.68
COLCA2-207ENST00000639470 SLC39A5Q6ZMH5 540 aa19.32■□□□□ 0.68
COLCA2-207ENST00000639470 MFSD6Q6ZSS7 791 aa19.32■□□□□ 0.68
COLCA2-207ENST00000639470 CHST13Q8NET6 341 aa19.32■□□□□ 0.68
COLCA2-207ENST00000639470 TRERF1Q96PN7 1200 aa19.32■□□□□ 0.68
COLCA2-207ENST00000639470 CDKN2AIPQ9NXV6 580 aaPredicted RBP19.32■□□□□ 0.68
COLCA2-207ENST00000639470 PLXNA1Q9UIW2 1896 aa19.31■□□□□ 0.68
COLCA2-207ENST00000639470 B4E1Z4 1266 aa19.31■□□□□ 0.68
COLCA2-207ENST00000639470 GOLGA8HP0CJ92 632 aa19.31■□□□□ 0.68
COLCA2-207ENST00000639470 RARBP10826 455 aa19.31■□□□□ 0.68
COLCA2-207ENST00000639470 PDHBP11177 359 aa19.31■□□□□ 0.68
COLCA2-207ENST00000639470 OAZ1P54368 228 aa19.31■□□□□ 0.68
COLCA2-207ENST00000639470 MAMDC4Q6UXC1 1216 aa19.31■□□□□ 0.68
COLCA2-207ENST00000639470 DHX30Q7L2E3 1194 aaKnown RBP eCLIP19.31■□□□□ 0.68
COLCA2-207ENST00000639470 ARMCX2Q7L311 632 aa19.31■□□□□ 0.68
COLCA2-207ENST00000639470 SH3RF1Q7Z6J0 888 aa19.31■□□□□ 0.68
COLCA2-207ENST00000639470 CCDC144CPQ8IYA2 1237 aa19.31■□□□□ 0.68
COLCA2-207ENST00000639470 ARRDC4Q8NCT1 418 aa19.31■□□□□ 0.68
COLCA2-207ENST00000639470 DCAF4Q8WV16 495 aa19.31■□□□□ 0.68
COLCA2-207ENST00000639470 ACAD9Q9H845 621 aa19.31■□□□□ 0.68
COLCA2-207ENST00000639470 CNPY2Q9Y2B0 182 aa19.31■□□□□ 0.68
COLCA2-207ENST00000639470 TAF6LQ9Y6J9 622 aa19.31■□□□□ 0.68
COLCA2-207ENST00000639470 SYNRGQ9UMZ2 1314 aa19.3■□□□□ 0.68
COLCA2-207ENST00000639470 C11orf97A0A1B0GVM6 126 aaPredicted RBP19.3■□□□□ 0.68
COLCA2-207ENST00000639470 KDM4AO75164 1064 aa19.3■□□□□ 0.68
COLCA2-207ENST00000639470 ADAMTS4O75173 837 aa19.3■□□□□ 0.68
COLCA2-207ENST00000639470 SYDE2Q5VT97 1194 aa19.3■□□□□ 0.68
COLCA2-207ENST00000639470 FAM133AQ8N9E0 248 aa19.3■□□□□ 0.68
COLCA2-207ENST00000639470 KATNBL1Q9H079 304 aa19.3■□□□□ 0.68
COLCA2-207ENST00000639470 TCP11L1Q9NUJ3 509 aa19.3■□□□□ 0.68
COLCA2-207ENST00000639470 CCPG1Q9ULG6 757 aa19.3■□□□□ 0.68
COLCA2-207ENST00000639470 SYNGAP1Q96PV0 1343 aa19.29■□□□□ 0.68
COLCA2-207ENST00000639470 SMCHD1A6NHR9 2005 aa19.29■□□□□ 0.68
COLCA2-207ENST00000639470 POTEB2H3BUK9 544 aa19.29■□□□□ 0.68
COLCA2-207ENST00000639470 NFIBO00712 420 aa19.29■□□□□ 0.68
COLCA2-207ENST00000639470 ZNF213O14771 459 aa19.29■□□□□ 0.68
COLCA2-207ENST00000639470 PLA2G6O60733 806 aa19.29■□□□□ 0.68
COLCA2-207ENST00000639470 AKR1A1P14550 325 aa19.29■□□□□ 0.68
COLCA2-207ENST00000639470 ACVR2BQ13705 512 aa19.29■□□□□ 0.68
COLCA2-207ENST00000639470 NSMFQ6X4W1 530 aa19.29■□□□□ 0.68
COLCA2-207ENST00000639470 RANBP17Q9H2T7 1088 aaKnown RBP19.29■□□□□ 0.68
COLCA2-207ENST00000639470 NRBP1Q9UHY1 535 aa19.29■□□□□ 0.68
COLCA2-207ENST00000639470 PTH1RQ03431 593 aa19.28■□□□□ 0.68
COLCA2-207ENST00000639470 ZNF543Q08ER8 600 aa19.28■□□□□ 0.68
COLCA2-207ENST00000639470 CCDC144BQ3MJ40 725 aa19.28■□□□□ 0.68
COLCA2-207ENST00000639470 BTNL9Q6UXG8 535 aa19.28■□□□□ 0.68
COLCA2-207ENST00000639470 EEPD1Q7L9B9 569 aa19.28■□□□□ 0.68
COLCA2-207ENST00000639470 TICAM2Q86XR7 235 aa19.28■□□□□ 0.68
COLCA2-207ENST00000639470 UBE2OQ9C0C9 1292 aaKnown RBP19.28■□□□□ 0.68
COLCA2-207ENST00000639470 UBA5Q9GZZ9 404 aa19.28■□□□□ 0.68
COLCA2-207ENST00000639470 PRDM5Q9NQX1 630 aaPredicted RBP19.28■□□□□ 0.68
COLCA2-207ENST00000639470 FBXO40Q9UH90 709 aa19.28■□□□□ 0.68
COLCA2-207ENST00000639470 PHF24Q9UPV7 400 aa19.28■□□□□ 0.68
COLCA2-207ENST00000639470 A0A1W2PQ45 241 aaPredicted RBP19.27■□□□□ 0.68
COLCA2-207ENST00000639470 A0A1W2PQY0 241 aa19.27■□□□□ 0.68
COLCA2-207ENST00000639470 ICAM1P05362 532 aa19.27■□□□□ 0.68
COLCA2-207ENST00000639470 ITGB8P26012 769 aa19.27■□□□□ 0.68
COLCA2-207ENST00000639470 BMP8BP34820 402 aa19.27■□□□□ 0.68
COLCA2-207ENST00000639470 MFAP1P55081 439 aaKnown RBP19.27■□□□□ 0.68
COLCA2-207ENST00000639470 PPP4R3BQ5MIZ7 849 aa19.27■□□□□ 0.68
COLCA2-207ENST00000639470 ZNF467Q7Z7K2 595 aaPredicted RBP19.27■□□□□ 0.68
COLCA2-207ENST00000639470 ESR2Q92731 530 aa19.27■□□□□ 0.68
COLCA2-207ENST00000639470 DSCC1Q9BVC3 393 aa19.27■□□□□ 0.68
COLCA2-207ENST00000639470 PDGFCQ9NRA1 345 aa19.27■□□□□ 0.68
COLCA2-207ENST00000639470 CYP39A1Q9NYL5 469 aa19.27■□□□□ 0.68
COLCA2-207ENST00000639470 FAM184BQ9ULE4 1060 aa19.27■□□□□ 0.68
COLCA2-207ENST00000639470 SZT2Q5T011 3432 aa19.26■□□□□ 0.67
COLCA2-207ENST00000639470 TRIM43BA6NCK2 446 aa19.26■□□□□ 0.67
COLCA2-207ENST00000639470 SNHG28P0DPA3 235 aa19.26■□□□□ 0.67
COLCA2-207ENST00000639470 TLE2Q04725 743 aa19.26■□□□□ 0.67
COLCA2-207ENST00000639470 BAATQ14032 418 aaPredicted RBP19.26■□□□□ 0.67
COLCA2-207ENST00000639470 SNX17Q15036 470 aa19.26■□□□□ 0.67
COLCA2-207ENST00000639470 SLC30A10Q6XR72 485 aa19.26■□□□□ 0.67
COLCA2-207ENST00000639470 FBXO16Q8IX29 292 aaPredicted RBP19.26■□□□□ 0.67
COLCA2-207ENST00000639470 TRIM43Q96BQ3 446 aaPredicted RBP19.26■□□□□ 0.67
COLCA2-207ENST00000639470 PDLIM7Q9NR12 457 aa19.26■□□□□ 0.67
COLCA2-207ENST00000639470 ZSWIM5Q9P217 1185 aa19.26■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms