RNA–Protein interactions for RNA: ENST00000625883.1

CDR1-202, Transcript of cerebellar degeneration related protein 1, humanhuman

BASIC

Gene CDR1, Length 1,485 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDR1-202ENST00000625883 PUS7Q96PZ0 661 aaKnown RBP5.96□□□□□ -1.45
CDR1-202ENST00000625883 SEMA3GQ9NS98 782 aa5.96□□□□□ -1.45
CDR1-202ENST00000625883 RNF112Q9ULX5 631 aa5.96□□□□□ -1.45
CDR1-202ENST00000625883 H3BS24 57 aa5.96□□□□□ -1.46
CDR1-202ENST00000625883 SCG5P05408 212 aa5.96□□□□□ -1.46
CDR1-202ENST00000625883 BMP8BP34820 402 aa5.96□□□□□ -1.46
CDR1-202ENST00000625883 SUMO1P63165 101 aaKnown RBP5.96□□□□□ -1.46
CDR1-202ENST00000625883 C21orf62-AS1Q17RA5 79 aa5.96□□□□□ -1.46
CDR1-202ENST00000625883 PRSS53Q2L4Q9 553 aa5.96□□□□□ -1.46
CDR1-202ENST00000625883 GAB4Q2WGN9 574 aa5.96□□□□□ -1.46
CDR1-202ENST00000625883 TMEM145Q8NBT3 493 aa5.96□□□□□ -1.46
CDR1-202ENST00000625883 TRIT1Q9H3H1 467 aaKnown RBP5.96□□□□□ -1.46
CDR1-202ENST00000625883 CYP26B1Q9NR63 512 aa5.96□□□□□ -1.46
CDR1-202ENST00000625883 GPATCH2Q9NW75 528 aa5.96□□□□□ -1.46
CDR1-202ENST00000625883 PIM2Q9P1W9 311 aa5.96□□□□□ -1.46
CDR1-202ENST00000625883 ZC3H7BQ9UGR2 993 aaKnown RBP5.96□□□□□ -1.46
CDR1-202ENST00000625883 PITPNM2Q9BZ72 1349 aa5.95□□□□□ -1.46
CDR1-202ENST00000625883 SCO2A0A1W2PP80 73 aa5.95□□□□□ -1.46
CDR1-202ENST00000625883 STXBP3O00186 592 aa5.95□□□□□ -1.46
CDR1-202ENST00000625883 PLD2O14939 933 aa5.95□□□□□ -1.46
CDR1-202ENST00000625883 AURKAO14965 403 aa5.95□□□□□ -1.46
CDR1-202ENST00000625883 CYP26A1O43174 497 aa5.95□□□□□ -1.46
CDR1-202ENST00000625883 RAPGEF3O95398 923 aa5.95□□□□□ -1.46
CDR1-202ENST00000625883 CD3EP07766 207 aa5.95□□□□□ -1.46
CDR1-202ENST00000625883 SNRPB2P08579 225 aaKnown RBP5.95□□□□□ -1.46
CDR1-202ENST00000625883 IFNGR1P15260 489 aa5.95□□□□□ -1.46
CDR1-202ENST00000625883 TPP2P29144 1249 aaPredicted RBP5.95□□□□□ -1.46
CDR1-202ENST00000625883 HOXC12P31275 282 aa5.95□□□□□ -1.46
CDR1-202ENST00000625883 POU4F1Q01851 419 aa5.95□□□□□ -1.46
CDR1-202ENST00000625883 SCRN1Q12765 414 aa5.95□□□□□ -1.46
CDR1-202ENST00000625883 MAP4K2Q12851 820 aa5.95□□□□□ -1.46
CDR1-202ENST00000625883 PABPC4Q13310 644 aaKnown RBP eCLIP5.95□□□□□ -1.46
CDR1-202ENST00000625883 NTRK3Q16288 839 aa5.95□□□□□ -1.46
CDR1-202ENST00000625883 IFI16Q16666 785 aaKnown RBP5.95□□□□□ -1.46
CDR1-202ENST00000625883 SLC35F1Q5T1Q4 408 aa5.95□□□□□ -1.46
CDR1-202ENST00000625883 DENND5AQ6IQ26 1287 aa5.95□□□□□ -1.46
CDR1-202ENST00000625883 INTS5Q6P9B9 1019 aaKnown RBP5.95□□□□□ -1.46
CDR1-202ENST00000625883 THAP5Q7Z6K1 395 aa5.95□□□□□ -1.46
CDR1-202ENST00000625883 USHBP1Q8N6Y0 703 aa5.95□□□□□ -1.46
CDR1-202ENST00000625883 NETO1Q8TDF5 533 aa5.95□□□□□ -1.46
CDR1-202ENST00000625883 COPS5Q92905 334 aa5.95□□□□□ -1.46
CDR1-202ENST00000625883 GPATCH3Q96I76 525 aa5.95□□□□□ -1.46
CDR1-202ENST00000625883 CLUHP3Q96NS8 147 aa5.95□□□□□ -1.46
CDR1-202ENST00000625883 FCRL3Q96P31 734 aaPredicted RBP5.95□□□□□ -1.46
CDR1-202ENST00000625883 SLC12A9Q9BXP2 914 aa5.95□□□□□ -1.46
CDR1-202ENST00000625883 SLKQ9H2G2 1235 aaPredicted RBP5.95□□□□□ -1.46
CDR1-202ENST00000625883 ZSWIM5Q9P217 1185 aa5.95□□□□□ -1.46
CDR1-202ENST00000625883 DNAJC25-GNG10A0A024R161 153 aa5.94□□□□□ -1.46
CDR1-202ENST00000625883 BLACEA4D250 179 aa5.94□□□□□ -1.46
CDR1-202ENST00000625883 RFPL3O75679 317 aa5.94□□□□□ -1.46
CDR1-202ENST00000625883 ZNF205O95201 554 aa5.94□□□□□ -1.46
CDR1-202ENST00000625883 FOSL1P15407 271 aa5.94□□□□□ -1.46
CDR1-202ENST00000625883 VAV1P15498 845 aa5.94□□□□□ -1.46
CDR1-202ENST00000625883 NCLP19338 710 aaKnown RBP5.94□□□□□ -1.46
CDR1-202ENST00000625883 HOXA10P31260 410 aaPredicted RBP5.94□□□□□ -1.46
CDR1-202ENST00000625883 KCNJ6P48051 423 aa5.94□□□□□ -1.46
CDR1-202ENST00000625883 FNDC3BQ53EP0 1204 aaKnown RBP5.94□□□□□ -1.46
CDR1-202ENST00000625883 CWF19L1Q69YN2 538 aaKnown RBP5.94□□□□□ -1.46
CDR1-202ENST00000625883 KREMEN2Q8NCW0 462 aa5.94□□□□□ -1.46
CDR1-202ENST00000625883 KCTD13Q8WZ19 329 aa5.94□□□□□ -1.46
CDR1-202ENST00000625883 UBE2FQ969M7 185 aa5.94□□□□□ -1.46
CDR1-202ENST00000625883 CCDC140Q96MF4 163 aa5.94□□□□□ -1.46
CDR1-202ENST00000625883 IPO9Q96P70 1041 aaKnown RBP5.94□□□□□ -1.46
CDR1-202ENST00000625883 MRPL4Q9BYD3 311 aaKnown RBP5.94□□□□□ -1.46
CDR1-202ENST00000625883 PLAAQ9Y263 795 aa5.94□□□□□ -1.46
CDR1-202ENST00000625883 PRKAB1Q9Y478 270 aa5.94□□□□□ -1.46
CDR1-202ENST00000625883 BACE2Q9Y5Z0 518 aa5.94□□□□□ -1.46
CDR1-202ENST00000625883 ECI1P42126 302 aa5.93□□□□□ -1.46
CDR1-202ENST00000625883 TRIM61Q5EBN2 209 aa5.93□□□□□ -1.46
CDR1-202ENST00000625883 RTP2Q5QGT7 225 aa5.93□□□□□ -1.46
CDR1-202ENST00000625883 FILIP1Q7Z7B0 1213 aa5.93□□□□□ -1.46
CDR1-202ENST00000625883 LINC00116Q8NCU8 138 aa5.93□□□□□ -1.46
CDR1-202ENST00000625883 NPLOC4Q8TAT6 608 aa5.93□□□□□ -1.46
CDR1-202ENST00000625883 NINJ1Q92982 152 aa5.93□□□□□ -1.46
CDR1-202ENST00000625883 FOXP3Q9BZS1 431 aa5.93□□□□□ -1.46
CDR1-202ENST00000625883 IFT57Q9NWB7 429 aa5.93□□□□□ -1.46
CDR1-202ENST00000625883 SNX11Q9Y5W9 270 aa5.93□□□□□ -1.46
CDR1-202ENST00000625883 TMEM265A0A087WTH1 108 aa5.92□□□□□ -1.46
CDR1-202ENST00000625883 KCNQ2O43526 872 aa5.92□□□□□ -1.46
CDR1-202ENST00000625883 COBLO75128 1261 aa5.92□□□□□ -1.46
CDR1-202ENST00000625883 CPP00450 1065 aa5.92□□□□□ -1.46
CDR1-202ENST00000625883 TGFB1P01137 390 aa5.92□□□□□ -1.46
CDR1-202ENST00000625883 ESR1P03372 595 aa5.92□□□□□ -1.46
CDR1-202ENST00000625883 THBDP07204 575 aa5.92□□□□□ -1.46
CDR1-202ENST00000625883 SYPP08247 313 aa5.92□□□□□ -1.46
CDR1-202ENST00000625883 ITGB7P26010 798 aa5.92□□□□□ -1.46
CDR1-202ENST00000625883 MASP1P48740 699 aa5.92□□□□□ -1.46
CDR1-202ENST00000625883 LRP8Q14114 963 aa5.92□□□□□ -1.46
CDR1-202ENST00000625883 TM4SF20Q53R12 229 aa5.92□□□□□ -1.46
CDR1-202ENST00000625883 RNF187Q5TA31 235 aaPredicted RBP5.92□□□□□ -1.46
CDR1-202ENST00000625883 NIM1KQ8IY84 436 aa5.92□□□□□ -1.46
CDR1-202ENST00000625883 SLC7A14Q8TBB6 771 aa5.92□□□□□ -1.46
CDR1-202ENST00000625883 FRS2Q8WU20 508 aa5.92□□□□□ -1.46
CDR1-202ENST00000625883 ATP13A1Q9HD20 1204 aa5.92□□□□□ -1.46
CDR1-202ENST00000625883 DUSP13Q9UII6 198 aa5.92□□□□□ -1.46
CDR1-202ENST00000625883 TCFL5Q9UL49 500 aa5.92□□□□□ -1.46
CDR1-202ENST00000625883 PCDHA11Q9Y5I1 949 aa5.92□□□□□ -1.46
CDR1-202ENST00000625883 C2orf71A6NGG8 1288 aa5.91□□□□□ -1.46
CDR1-202ENST00000625883 ARNTLO00327 626 aa5.91□□□□□ -1.46
CDR1-202ENST00000625883 DNAJC6O75061 913 aa5.91□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms