RNA–Protein interactions for RNA: ENST00000621708.4

PCDH15-233, Transcript of protocadherin related 15, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PCDH15, Length 5,700 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH15-233ENST00000621708 ZNF341Q9BYN7 854 aa9.72□□□□□ -0.85
PCDH15-233ENST00000621708 TRIM6Q9C030 488 aaPredicted RBP9.72□□□□□ -0.85
PCDH15-233ENST00000621708 TSPYL1Q9H0U9 437 aa9.72□□□□□ -0.85
PCDH15-233ENST00000621708 CBX8Q9HC52 389 aa9.72□□□□□ -0.85
PCDH15-233ENST00000621708 ZSWIM5Q9P217 1185 aa9.72□□□□□ -0.85
PCDH15-233ENST00000621708 hCG_1642624A0A1W2PR95 340 aa9.72□□□□□ -0.85
PCDH15-233ENST00000621708 ATP2A1O14983 1001 aa9.72□□□□□ -0.85
PCDH15-233ENST00000621708 GOLGA8HP0CJ92 632 aa9.72□□□□□ -0.85
PCDH15-233ENST00000621708 RAPGEF1Q13905 1077 aa9.72□□□□□ -0.85
PCDH15-233ENST00000621708 SLC9C1Q4G0N8 1177 aa9.72□□□□□ -0.85
PCDH15-233ENST00000621708 GPKOWQ92917 476 aaPredicted RBP eCLIP9.72□□□□□ -0.85
PCDH15-233ENST00000621708 MTUS1Q9ULD2 1270 aa9.72□□□□□ -0.85
PCDH15-233ENST00000621708 NFE2L3Q9Y4A8 694 aa9.72□□□□□ -0.85
PCDH15-233ENST00000621708 NCAPG2Q86XI2 1143 aa9.72□□□□□ -0.85
PCDH15-233ENST00000621708 CCND2P30279 289 aa9.72□□□□□ -0.85
PCDH15-233ENST00000621708 ZNF75DP51815 510 aa9.72□□□□□ -0.85
PCDH15-233ENST00000621708 DIXDC1Q155Q3 683 aa9.72□□□□□ -0.85
PCDH15-233ENST00000621708 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.72□□□□□ -0.85
PCDH15-233ENST00000621708 DNAI1Q9UI46 699 aa9.72□□□□□ -0.85
PCDH15-233ENST00000621708 GPSM2P81274 684 aa9.71□□□□□ -0.85
PCDH15-233ENST00000621708 CSRNP2Q9H175 543 aa9.71□□□□□ -0.85
PCDH15-233ENST00000621708 TMOD1P28289 359 aa9.71□□□□□ -0.85
PCDH15-233ENST00000621708 COPB2P35606 906 aa9.71□□□□□ -0.85
PCDH15-233ENST00000621708 TFDP1Q14186 410 aa9.71□□□□□ -0.85
PCDH15-233ENST00000621708 DYDC1Q8WWB3 177 aa9.71□□□□□ -0.85
PCDH15-233ENST00000621708 GSDMAQ96QA5 445 aa9.71□□□□□ -0.85
PCDH15-233ENST00000621708 FSD2A1L4K1 749 aa9.71□□□□□ -0.86
PCDH15-233ENST00000621708 DYNC1I1O14576 645 aa9.71□□□□□ -0.86
PCDH15-233ENST00000621708 ORC4O43929 436 aa9.71□□□□□ -0.86
PCDH15-233ENST00000621708 PTGS1P23219 599 aa9.71□□□□□ -0.86
PCDH15-233ENST00000621708 TECP42680 631 aa9.71□□□□□ -0.86
PCDH15-233ENST00000621708 MMP14P50281 582 aa9.71□□□□□ -0.86
PCDH15-233ENST00000621708 TNNC1P63316 161 aa9.71□□□□□ -0.86
PCDH15-233ENST00000621708 KIF23Q02241 960 aaPredicted RBP9.71□□□□□ -0.86
PCDH15-233ENST00000621708 PTGDRQ13258 359 aa9.71□□□□□ -0.86
PCDH15-233ENST00000621708 ARL6IP4Q66PJ3 421 aaKnown RBP9.71□□□□□ -0.86
PCDH15-233ENST00000621708 DYMQ7RTS9 669 aa9.71□□□□□ -0.86
PCDH15-233ENST00000621708 CCDC155Q8N6L0 562 aa9.71□□□□□ -0.86
PCDH15-233ENST00000621708 LINC00116Q8NCU8 138 aa9.71□□□□□ -0.86
PCDH15-233ENST00000621708 CCDC77Q9BR77 488 aa9.71□□□□□ -0.86
PCDH15-233ENST00000621708 FBXO40Q9UH90 709 aa9.71□□□□□ -0.86
PCDH15-233ENST00000621708 HERC5Q9UII4 1024 aaKnown RBP9.71□□□□□ -0.86
PCDH15-233ENST00000621708 ATP6V0A2Q9Y487 856 aa9.71□□□□□ -0.86
PCDH15-233ENST00000621708 TSGA10IPQ3SY00 556 aa9.71□□□□□ -0.86
PCDH15-233ENST00000621708 RCSD1Q6JBY9 416 aa9.71□□□□□ -0.86
PCDH15-233ENST00000621708 STMN4Q9H169 189 aaPredicted RBP9.71□□□□□ -0.86
PCDH15-233ENST00000621708 PCDHA7Q9UN72 937 aa9.71□□□□□ -0.86
PCDH15-233ENST00000621708 LMAN1P49257 510 aa9.71□□□□□ -0.86
PCDH15-233ENST00000621708 SH3RF3Q8TEJ3 882 aaPredicted RBP9.71□□□□□ -0.86
PCDH15-233ENST00000621708 GOLGA1Q92805 767 aa9.71□□□□□ -0.86
PCDH15-233ENST00000621708 VPS16Q9H269 839 aa9.71□□□□□ -0.86
PCDH15-233ENST00000621708 NDC80O14777 642 aa9.7□□□□□ -0.86
PCDH15-233ENST00000621708 ARID5AQ03989 594 aa9.7□□□□□ -0.86
PCDH15-233ENST00000621708 SMC1AQ14683 1233 aaKnown RBP9.7□□□□□ -0.86
PCDH15-233ENST00000621708 SPECC1Q5M775 1068 aa9.7□□□□□ -0.86
PCDH15-233ENST00000621708 ATG9AQ7Z3C6 839 aa9.7□□□□□ -0.86
PCDH15-233ENST00000621708 TSKSQ9UJT2 592 aa9.7□□□□□ -0.86
PCDH15-233ENST00000621708 FEM1BQ9UK73 627 aa9.7□□□□□ -0.86
PCDH15-233ENST00000621708 SHTN1A0MZ66 631 aa9.7□□□□□ -0.86
PCDH15-233ENST00000621708 NTSR2O95665 410 aa9.7□□□□□ -0.86
PCDH15-233ENST00000621708 EEF2P13639 858 aaKnown RBP9.7□□□□□ -0.86
PCDH15-233ENST00000621708 KRT5P13647 590 aa9.7□□□□□ -0.86
PCDH15-233ENST00000621708 SEL1L2Q5TEA6 688 aa9.7□□□□□ -0.86
PCDH15-233ENST00000621708 FAM84BQ96KN1 310 aaPredicted RBP9.7□□□□□ -0.86
PCDH15-233ENST00000621708 TSNARE1Q96NA8 513 aa9.7□□□□□ -0.86
PCDH15-233ENST00000621708 PANK4Q9NVE7 773 aa9.7□□□□□ -0.86
PCDH15-233ENST00000621708 ARHGAP6O43182 974 aa9.7□□□□□ -0.86
PCDH15-233ENST00000621708 SLU7O95391 586 aaKnown RBP9.7□□□□□ -0.86
PCDH15-233ENST00000621708 XKR9Q5GH70 373 aa9.7□□□□□ -0.86
PCDH15-233ENST00000621708 STRIP1Q5VSL9 837 aa9.7□□□□□ -0.86
PCDH15-233ENST00000621708 LRCH2Q5VUJ6 765 aa9.7□□□□□ -0.86
PCDH15-233ENST00000621708 PRR5LQ6MZQ0 368 aa9.7□□□□□ -0.86
PCDH15-233ENST00000621708 MIS18BP1Q6P0N0 1132 aa9.7□□□□□ -0.86
PCDH15-233ENST00000621708 TMTC3Q6ZXV5 915 aa9.7□□□□□ -0.86
PCDH15-233ENST00000621708 JAKMIP2Q96AA8 810 aa9.7□□□□□ -0.86
PCDH15-233ENST00000621708 COL3A1P02461 1466 aaPredicted RBP9.7□□□□□ -0.86
PCDH15-233ENST00000621708 GADD45BO75293 160 aaPredicted RBP9.7□□□□□ -0.86
PCDH15-233ENST00000621708 BMS1Q14692 1282 aaKnown RBP9.7□□□□□ -0.86
PCDH15-233ENST00000621708 CMTR1Q8N1G2 835 aaKnown RBP9.7□□□□□ -0.86
PCDH15-233ENST00000621708 FAM81BQ96LP2 452 aa9.7□□□□□ -0.86
PCDH15-233ENST00000621708 IKBKGQ9Y6K9 419 aa9.7□□□□□ -0.86
PCDH15-233ENST00000621708 PHLPP2Q6ZVD8 1323 aa9.7□□□□□ -0.86
PCDH15-233ENST00000621708 HSF2BPO75031 334 aa9.69□□□□□ -0.86
PCDH15-233ENST00000621708 GDF11O95390 407 aa9.69□□□□□ -0.86
PCDH15-233ENST00000621708 DMP1Q13316 513 aaPredicted RBP9.69□□□□□ -0.86
PCDH15-233ENST00000621708 PIGSQ96S52 555 aa9.69□□□□□ -0.86
PCDH15-233ENST00000621708 ADPGKQ9BRR6 497 aa9.69□□□□□ -0.86
PCDH15-233ENST00000621708 DCP1AQ9NPI6 582 aaPredicted RBP9.69□□□□□ -0.86
PCDH15-233ENST00000621708 RCOR1Q9UKL0 485 aa9.69□□□□□ -0.86
PCDH15-233ENST00000621708 TRPC6Q9Y210 931 aa9.69□□□□□ -0.86
PCDH15-233ENST00000621708 TNS2Q63HR2 1409 aa9.69□□□□□ -0.86
PCDH15-233ENST00000621708 CLCN1P35523 988 aa9.69□□□□□ -0.86
PCDH15-233ENST00000621708 ALCAMQ13740 583 aa9.69□□□□□ -0.86
PCDH15-233ENST00000621708 CCDC122Q5T0U0 273 aa9.69□□□□□ -0.86
PCDH15-233ENST00000621708 CCDC125Q86Z20 511 aa9.69□□□□□ -0.86
PCDH15-233ENST00000621708 UBR1Q8IWV7 1749 aa9.69□□□□□ -0.86
PCDH15-233ENST00000621708 ZEB2O60315 1214 aa9.69□□□□□ -0.86
PCDH15-233ENST00000621708 RPN1P04843 607 aaKnown RBP9.69□□□□□ -0.86
PCDH15-233ENST00000621708 HARSP12081 509 aaKnown RBP9.69□□□□□ -0.86
PCDH15-233ENST00000621708 ERCC5P28715 1186 aaPredicted RBP9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 115 ms