RNA–Protein interactions for RNA: ENST00000621325.1

LIME1-210, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

TSL 2

Gene LIME1, Length 2,410 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-210ENST00000621325 ZNF543Q08ER8 600 aa24.13■■□□□ 1.45
LIME1-210ENST00000621325 KARSQ15046 597 aaKnown RBP24.13■■□□□ 1.45
LIME1-210ENST00000621325 SOGA3Q5TF21 947 aa24.13■■□□□ 1.45
LIME1-210ENST00000621325 CCDC34Q96HJ3 373 aa24.13■■□□□ 1.45
LIME1-210ENST00000621325 GNA11P29992 359 aa24.12■■□□□ 1.45
LIME1-210ENST00000621325 LETM2Q2VYF4 491 aa24.12■■□□□ 1.45
LIME1-210ENST00000621325 JAKMIP3Q5VZ66 844 aa24.12■■□□□ 1.45
LIME1-210ENST00000621325 DTHD1Q6ZMT9 781 aa24.12■■□□□ 1.45
LIME1-210ENST00000621325 ZSCAN29Q8IWY8 852 aaPredicted RBP24.12■■□□□ 1.45
LIME1-210ENST00000621325 FAM177A1Q8N128 213 aaPredicted RBP24.12■■□□□ 1.45
LIME1-210ENST00000621325 SKILP12757 684 aa24.12■■□□□ 1.45
LIME1-210ENST00000621325 SLC16A2P36021 539 aa24.12■■□□□ 1.45
LIME1-210ENST00000621325 HDLBPQ00341 1268 aaKnown RBP24.12■■□□□ 1.45
LIME1-210ENST00000621325 NONOQ15233 471 aaKnown RBP eCLIP24.12■■□□□ 1.45
LIME1-210ENST00000621325 KRT25Q7Z3Z0 450 aa24.12■■□□□ 1.45
LIME1-210ENST00000621325 IDI2Q9BXS1 227 aa24.12■■□□□ 1.45
LIME1-210ENST00000621325 DACH1Q9UI36 760 aa24.12■■□□□ 1.45
LIME1-210ENST00000621325 ARMCX5Q6P1M9 558 aa24.11■■□□□ 1.45
LIME1-210ENST00000621325 ENOX1Q8TC92 643 aaKnown RBP24.11■■□□□ 1.45
LIME1-210ENST00000621325 TDRD3Q9H7E2 651 aaKnown RBP24.11■■□□□ 1.45
LIME1-210ENST00000621325 JMJD4Q9H9V9 463 aa24.11■■□□□ 1.45
LIME1-210ENST00000621325 IMPACTQ9P2X3 320 aa24.11■■□□□ 1.45
LIME1-210ENST00000621325 SIPA1L1O43166 1804 aa24.11■■□□□ 1.45
LIME1-210ENST00000621325 TMEM232C9JQI7 657 aa24.11■■□□□ 1.45
LIME1-210ENST00000621325 PPIP5K2O43314 1243 aa24.11■■□□□ 1.45
LIME1-210ENST00000621325 CUL4BQ13620 913 aa24.11■■□□□ 1.45
LIME1-210ENST00000621325 CFAP100Q494V2 611 aa24.11■■□□□ 1.45
LIME1-210ENST00000621325 KCTD1Q719H9 257 aa24.11■■□□□ 1.45
LIME1-210ENST00000621325 ADGRF4Q8IZF3 695 aa24.11■■□□□ 1.45
LIME1-210ENST00000621325 CCNT1O60563 726 aaKnown RBP24.1■■□□□ 1.45
LIME1-210ENST00000621325 KLHL10Q6JEL2 608 aa24.1■■□□□ 1.45
LIME1-210ENST00000621325 GSDMAQ96QA5 445 aa24.1■■□□□ 1.45
LIME1-210ENST00000621325 SAMSN1Q9NSI8 373 aaKnown RBP24.1■■□□□ 1.45
LIME1-210ENST00000621325 INTS13Q9NVM9 706 aa24.1■■□□□ 1.45
LIME1-210ENST00000621325 SERPINA10Q9UK55 444 aa24.1■■□□□ 1.45
LIME1-210ENST00000621325 NEMFO60524 1076 aa24.1■■□□□ 1.45
LIME1-210ENST00000621325 PPP1R11O60927 126 aaPredicted RBP24.1■■□□□ 1.45
LIME1-210ENST00000621325 ZNF18P17022 549 aa24.1■■□□□ 1.45
LIME1-210ENST00000621325 CCDC96Q2M329 555 aa24.1■■□□□ 1.45
LIME1-210ENST00000621325 MTERF4Q7Z6M4 381 aaKnown RBP24.1■■□□□ 1.45
LIME1-210ENST00000621325 REXO1Q8N1G1 1221 aaKnown RBP24.1■■□□□ 1.45
LIME1-210ENST00000621325 TBCKQ8TEA7 893 aa24.1■■□□□ 1.45
LIME1-210ENST00000621325 DHX36Q9H2U1 1008 aaKnown RBP24.1■■□□□ 1.45
LIME1-210ENST00000621325 PI4KBQ9UBF8 816 aa24.1■■□□□ 1.45
LIME1-210ENST00000621325 GSDMDP57764 484 aa24.09■■□□□ 1.45
LIME1-210ENST00000621325 PLIN2Q99541 437 aa24.09■■□□□ 1.45
LIME1-210ENST00000621325 GREB1LQ9C091 1923 aaPredicted RBP24.09■■□□□ 1.45
LIME1-210ENST00000621325 ESYT2A0FGR8 921 aa24.09■■□□□ 1.45
LIME1-210ENST00000621325 STX17P56962 302 aa24.09■■□□□ 1.45
LIME1-210ENST00000621325 PRMT6Q96LA8 375 aaPredicted RBP24.09■■□□□ 1.45
LIME1-210ENST00000621325 CCDC17Q96LX7 622 aa24.09■■□□□ 1.45
LIME1-210ENST00000621325 NAALADL2Q58DX5 795 aa24.08■■□□□ 1.45
LIME1-210ENST00000621325 DEFB132Q7Z7B7 95 aa24.08■■□□□ 1.45
LIME1-210ENST00000621325 NEK8Q86SG6 692 aa24.08■■□□□ 1.45
LIME1-210ENST00000621325 CCDC94Q9BW85 323 aaPredicted RBP24.08■■□□□ 1.45
LIME1-210ENST00000621325 DISC1Q9NRI5 854 aa24.08■■□□□ 1.45
LIME1-210ENST00000621325 USP27XA6NNY8 438 aa24.08■■□□□ 1.44
LIME1-210ENST00000621325 USP17L10C9JJH3 530 aa24.08■■□□□ 1.44
LIME1-210ENST00000621325 RAD21O60216 631 aa24.08■■□□□ 1.44
LIME1-210ENST00000621325 EEF2P13639 858 aaKnown RBP24.08■■□□□ 1.44
LIME1-210ENST00000621325 ERCC5P28715 1186 aaPredicted RBP24.08■■□□□ 1.44
LIME1-210ENST00000621325 TXLNAP40222 546 aa24.08■■□□□ 1.44
LIME1-210ENST00000621325 STAT6P42226 847 aa24.08■■□□□ 1.44
LIME1-210ENST00000621325 CERKLQ49MI3 558 aaPredicted RBP24.08■■□□□ 1.44
LIME1-210ENST00000621325 PPP1R3GB7ZBB8 358 aa24.07■■□□□ 1.44
LIME1-210ENST00000621325 LRRC15Q8TF66 581 aa24.07■■□□□ 1.44
LIME1-210ENST00000621325 GTPBP6O43824 516 aaPredicted RBP24.06■■□□□ 1.44
LIME1-210ENST00000621325 C16orf45Q96MC5 204 aaPredicted RBP24.06■■□□□ 1.44
LIME1-210ENST00000621325 MYH4Q9Y623 1939 aa24.06■■□□□ 1.44
LIME1-210ENST00000621325 C10orf71Q711Q0 1435 aa24.06■■□□□ 1.44
LIME1-210ENST00000621325 PNMA6FA0A0J9YX94 578 aa24.06■■□□□ 1.44
LIME1-210ENST00000621325 CBFA2T2O43439 604 aa24.06■■□□□ 1.44
LIME1-210ENST00000621325 MYO1BO43795 1136 aa24.06■■□□□ 1.44
LIME1-210ENST00000621325 COBLO75128 1261 aa24.06■■□□□ 1.44
LIME1-210ENST00000621325 OR52Z1P0C646 297 aa24.06■■□□□ 1.44
LIME1-210ENST00000621325 ADCY7P51828 1080 aa24.06■■□□□ 1.44
LIME1-210ENST00000621325 SEPT2Q15019 361 aa24.06■■□□□ 1.44
LIME1-210ENST00000621325 SIAH1Q8IUQ4 282 aa24.06■■□□□ 1.44
LIME1-210ENST00000621325 PYM1Q9BRP8 204 aaKnown RBP24.06■■□□□ 1.44
LIME1-210ENST00000621325 hCG_1984214I3L0E3 225 aa24.05■■□□□ 1.44
LIME1-210ENST00000621325 LAD1O00515 517 aa24.05■■□□□ 1.44
LIME1-210ENST00000621325 EDIL3O43854 480 aa24.05■■□□□ 1.44
LIME1-210ENST00000621325 GDF11O95390 407 aa24.05■■□□□ 1.44
LIME1-210ENST00000621325 CDK11BP21127 795 aaKnown RBP24.05■■□□□ 1.44
LIME1-210ENST00000621325 PRPHP41219 470 aa24.05■■□□□ 1.44
LIME1-210ENST00000621325 UBA7P41226 1012 aa24.05■■□□□ 1.44
LIME1-210ENST00000621325 CC2D2BQ6DHV5 1058 aa24.05■■□□□ 1.44
LIME1-210ENST00000621325 VSTM4Q8IW00 320 aa24.05■■□□□ 1.44
LIME1-210ENST00000621325 ZNF713Q8N859 430 aaPredicted RBP24.05■■□□□ 1.44
LIME1-210ENST00000621325 RASSF8Q8NHQ8 419 aa24.05■■□□□ 1.44
LIME1-210ENST00000621325 JAG1P78504 1218 aa24.04■■□□□ 1.44
LIME1-210ENST00000621325 UBE2SQ16763 222 aa24.04■■□□□ 1.44
LIME1-210ENST00000621325 GPATCH4Q5T3I0 446 aaKnown RBP24.04■■□□□ 1.44
LIME1-210ENST00000621325 TATDN1Q6P1N9 297 aa24.04■■□□□ 1.44
LIME1-210ENST00000621325 POTEDQ86YR6 584 aa24.04■■□□□ 1.44
LIME1-210ENST00000621325 SUPT20HQ8NEM7 779 aa24.04■■□□□ 1.44
LIME1-210ENST00000621325 DYNC1I1O14576 645 aa24.04■■□□□ 1.44
LIME1-210ENST00000621325 SFPQP23246 707 aaKnown RBP eCLIP24.04■■□□□ 1.44
LIME1-210ENST00000621325 GOLGA8FQ08AF8 430 aa24.04■■□□□ 1.44
LIME1-210ENST00000621325 GOLGA8DPQ0D2H9 430 aa24.04■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 112.4 ms