RNA–Protein interactions for RNA: ENST00000621271.4

CLTCL1-211, Transcript of clathrin heavy chain like 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CLTCL1, Length 5,313 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-211ENST00000621271 PDZD4Q76G19 769 aaPredicted RBP10.8□□□□□ -0.68
CLTCL1-211ENST00000621271 RSRC2Q7L4I2 434 aaKnown RBP10.8□□□□□ -0.68
CLTCL1-211ENST00000621271 SRGAP1Q7Z6B7 1085 aa10.8□□□□□ -0.68
CLTCL1-211ENST00000621271 IGSF22Q8N9C0 903 aa10.8□□□□□ -0.68
CLTCL1-211ENST00000621271 MYO3BQ8WXR4 1341 aa10.79□□□□□ -0.68
CLTCL1-211ENST00000621271 SCG2P13521 617 aa10.79□□□□□ -0.68
CLTCL1-211ENST00000621271 POLR2BP30876 1174 aaKnown RBP10.79□□□□□ -0.68
CLTCL1-211ENST00000621271 TBC1D10BQ4KMP7 808 aaPredicted RBP10.79□□□□□ -0.68
CLTCL1-211ENST00000621271 MLKLQ8NB16 471 aa10.79□□□□□ -0.68
CLTCL1-211ENST00000621271 EDC3Q96F86 508 aaKnown RBP10.79□□□□□ -0.68
CLTCL1-211ENST00000621271 FTOQ9C0B1 505 aaKnown RBP eCLIP10.79□□□□□ -0.68
CLTCL1-211ENST00000621271 ERCC3P19447 782 aa10.79□□□□□ -0.68
CLTCL1-211ENST00000621271 CCND2P30279 289 aa10.79□□□□□ -0.68
CLTCL1-211ENST00000621271 ELF1P32519 619 aa10.79□□□□□ -0.68
CLTCL1-211ENST00000621271 TECP42680 631 aa10.79□□□□□ -0.68
CLTCL1-211ENST00000621271 STAT2P52630 851 aa10.79□□□□□ -0.68
CLTCL1-211ENST00000621271 EEPD1Q7L9B9 569 aa10.79□□□□□ -0.68
CLTCL1-211ENST00000621271 CCDC84Q86UT8 332 aaPredicted RBP10.79□□□□□ -0.68
CLTCL1-211ENST00000621271 KCNK9Q9NPC2 374 aa10.79□□□□□ -0.68
CLTCL1-211ENST00000621271 COL4A3BPQ9Y5P4 624 aa10.79□□□□□ -0.68
CLTCL1-211ENST00000621271 GRIN3BO60391 1043 aa10.79□□□□□ -0.68
CLTCL1-211ENST00000621271 CIAO1O76071 339 aa10.79□□□□□ -0.68
CLTCL1-211ENST00000621271 SLC12A2P55011 1212 aa10.79□□□□□ -0.68
CLTCL1-211ENST00000621271 EN1Q05925 392 aaPredicted RBP10.79□□□□□ -0.68
CLTCL1-211ENST00000621271 SLC27A3Q5K4L6 730 aa10.79□□□□□ -0.68
CLTCL1-211ENST00000621271 ODR4Q5SWX8 454 aa10.79□□□□□ -0.68
CLTCL1-211ENST00000621271 AFAP1L2Q8N4X5 818 aa10.79□□□□□ -0.68
CLTCL1-211ENST00000621271 XRCC5P13010 732 aaKnown RBP10.79□□□□□ -0.68
CLTCL1-211ENST00000621271 ADRA2BP18089 450 aa10.79□□□□□ -0.68
CLTCL1-211ENST00000621271 PPP2R5CQ13362 524 aa10.79□□□□□ -0.68
CLTCL1-211ENST00000621271 ARMCX5Q6P1M9 558 aa10.79□□□□□ -0.68
CLTCL1-211ENST00000621271 SCYL2Q6P3W7 929 aa10.79□□□□□ -0.68
CLTCL1-211ENST00000621271 CLEC4GQ6UXB4 293 aa10.79□□□□□ -0.68
CLTCL1-211ENST00000621271 GCNAQ96QF7 691 aa10.79□□□□□ -0.68
CLTCL1-211ENST00000621271 CLSTN2Q9H4D0 955 aa10.79□□□□□ -0.68
CLTCL1-211ENST00000621271 ACTN4O43707 911 aaKnown RBP10.78□□□□□ -0.68
CLTCL1-211ENST00000621271 N4BP1O75113 896 aaKnown RBP10.78□□□□□ -0.68
CLTCL1-211ENST00000621271 TUBBP07437 444 aa10.78□□□□□ -0.68
CLTCL1-211ENST00000621271 BEND3Q5T5X7 828 aa10.78□□□□□ -0.68
CLTCL1-211ENST00000621271 LRCH2Q5VUJ6 765 aa10.78□□□□□ -0.68
CLTCL1-211ENST00000621271 SPATA24Q86W54 205 aa10.78□□□□□ -0.68
CLTCL1-211ENST00000621271 GJD4Q96KN9 370 aaPredicted RBP10.78□□□□□ -0.68
CLTCL1-211ENST00000621271 TMEM106CQ9BVX2 250 aa10.78□□□□□ -0.68
CLTCL1-211ENST00000621271 USP44Q9H0E7 712 aa10.78□□□□□ -0.68
CLTCL1-211ENST00000621271 PTPRTO14522 1441 aa10.78□□□□□ -0.68
CLTCL1-211ENST00000621271 ESYT2A0FGR8 921 aa10.78□□□□□ -0.68
CLTCL1-211ENST00000621271 OR52Z1P0C646 297 aa10.78□□□□□ -0.68
CLTCL1-211ENST00000621271 DLATP10515 647 aaKnown RBP10.78□□□□□ -0.68
CLTCL1-211ENST00000621271 ITKQ08881 620 aa10.78□□□□□ -0.68
CLTCL1-211ENST00000621271 KLHL30Q0D2K2 578 aa10.78□□□□□ -0.68
CLTCL1-211ENST00000621271 SKIV2LQ15477 1246 aaKnown RBP10.78□□□□□ -0.68
CLTCL1-211ENST00000621271 NLRP7Q8WX94 980 aa10.78□□□□□ -0.68
CLTCL1-211ENST00000621271 GPKOWQ92917 476 aaPredicted RBP eCLIP10.78□□□□□ -0.68
CLTCL1-211ENST00000621271 ZNF577Q9BSK1 485 aa10.78□□□□□ -0.68
CLTCL1-211ENST00000621271 PALD1Q9ULE6 856 aa10.78□□□□□ -0.68
CLTCL1-211ENST00000621271 MUM1L1Q5H9M0 696 aa10.78□□□□□ -0.68
CLTCL1-211ENST00000621271 C4orf50Q6ZRC1 276 aa10.78□□□□□ -0.68
CLTCL1-211ENST00000621271 MYOCDQ8IZQ8 938 aa10.78□□□□□ -0.68
CLTCL1-211ENST00000621271 TMEM63CQ9P1W3 806 aa10.78□□□□□ -0.68
CLTCL1-211ENST00000621271 ASNSP08243 561 aa10.78□□□□□ -0.68
CLTCL1-211ENST00000621271 ARPP19P56211 112 aa10.78□□□□□ -0.68
CLTCL1-211ENST00000621271 LACTBP83111 547 aaPredicted RBP10.78□□□□□ -0.68
CLTCL1-211ENST00000621271 KRT81Q14533 505 aa10.78□□□□□ -0.68
CLTCL1-211ENST00000621271 TAOK1Q7L7X3 1001 aa10.78□□□□□ -0.68
CLTCL1-211ENST00000621271 NLRP10Q86W26 655 aa10.78□□□□□ -0.68
CLTCL1-211ENST00000621271 FOXP4Q8IVH2 680 aaPredicted RBP10.78□□□□□ -0.68
CLTCL1-211ENST00000621271 CMTR1Q8N1G2 835 aaKnown RBP10.78□□□□□ -0.68
CLTCL1-211ENST00000621271 EAF2Q96CJ1 260 aaPredicted RBP10.78□□□□□ -0.68
CLTCL1-211ENST00000621271 RABGAP1Q9Y3P9 1069 aa10.78□□□□□ -0.68
CLTCL1-211ENST00000621271 PLXNC1O60486 1568 aa10.78□□□□□ -0.68
CLTCL1-211ENST00000621271 SPATA31A3Q5VYP0 1347 aa10.78□□□□□ -0.68
CLTCL1-211ENST00000621271 UBXN2AP68543 259 aa10.77□□□□□ -0.68
CLTCL1-211ENST00000621271 KCTD1Q719H9 257 aa10.77□□□□□ -0.68
CLTCL1-211ENST00000621271 C17orf53Q8N3J3 647 aaPredicted RBP10.77□□□□□ -0.68
CLTCL1-211ENST00000621271 SLC17A8Q8NDX2 589 aa10.77□□□□□ -0.68
CLTCL1-211ENST00000621271 RASSF4Q9H2L5 321 aa10.77□□□□□ -0.68
CLTCL1-211ENST00000621271 HNRNPDLO14979 420 aaKnown RBP10.77□□□□□ -0.68
CLTCL1-211ENST00000621271 PFDN6O15212 129 aa10.77□□□□□ -0.68
CLTCL1-211ENST00000621271 CYP4A11Q02928 519 aa10.77□□□□□ -0.68
CLTCL1-211ENST00000621271 FAM160B2Q86V87 743 aa10.77□□□□□ -0.68
CLTCL1-211ENST00000621271 BAG1Q99933 345 aaPredicted RBP10.77□□□□□ -0.68
CLTCL1-211ENST00000621271 PUS3Q9BZE2 481 aaKnown RBP10.77□□□□□ -0.68
CLTCL1-211ENST00000621271 MYO1AQ9UBC5 1043 aa10.77□□□□□ -0.68
CLTCL1-211ENST00000621271 TPD52P55327 224 aaPredicted RBP10.77□□□□□ -0.69
CLTCL1-211ENST00000621271 SSH3Q8TE77 659 aa10.77□□□□□ -0.69
CLTCL1-211ENST00000621271 POMGNT1Q8WZA1 660 aa10.77□□□□□ -0.69
CLTCL1-211ENST00000621271 VPS18Q9P253 973 aa10.77□□□□□ -0.69
CLTCL1-211ENST00000621271 FAM184BQ9ULE4 1060 aa10.77□□□□□ -0.69
CLTCL1-211ENST00000621271 FAM135BQ49AJ0 1406 aa10.77□□□□□ -0.69
CLTCL1-211ENST00000621271 SPATA31E1Q6ZUB1 1445 aa10.77□□□□□ -0.69
CLTCL1-211ENST00000621271 CDC42BPAQ5VT25 1732 aa10.77□□□□□ -0.69
CLTCL1-211ENST00000621271 ATP2C2O75185 946 aa10.77□□□□□ -0.69
CLTCL1-211ENST00000621271 STAM2O75886 525 aa10.77□□□□□ -0.69
CLTCL1-211ENST00000621271 POSTNQ15063 836 aa10.77□□□□□ -0.69
CLTCL1-211ENST00000621271 AOC3Q16853 763 aa10.77□□□□□ -0.69
CLTCL1-211ENST00000621271 BSPRYQ5W0U4 402 aa10.77□□□□□ -0.69
CLTCL1-211ENST00000621271 C1orf228Q6PIY5 440 aa10.77□□□□□ -0.69
CLTCL1-211ENST00000621271 BBS5Q8N3I7 341 aa10.77□□□□□ -0.69
CLTCL1-211ENST00000621271 CCDC89Q8N998 374 aa10.77□□□□□ -0.69
CLTCL1-211ENST00000621271 NELFBQ8WX92 580 aa10.77□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms