RNA–Protein interactions for RNA: ENST00000620511.1

TRIO-224, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

TSL 2 BASIC

Gene TRIO, Length 1,547 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-224ENST00000620511 SNX21Q969T3 373 aa11.18□□□□□ -0.62
TRIO-224ENST00000620511 ARHGAP39Q9C0H5 1083 aa11.18□□□□□ -0.62
TRIO-224ENST00000620511 PORCNQ9H237 461 aa11.18□□□□□ -0.62
TRIO-224ENST00000620511 RIPK3Q9Y572 518 aa11.18□□□□□ -0.62
TRIO-224ENST00000620511 BRCA2P51587 3418 aa11.17□□□□□ -0.62
TRIO-224ENST00000620511 GOLGA8BA8MQT2 603 aa11.17□□□□□ -0.62
TRIO-224ENST00000620511 ATP2A1O14983 1001 aa11.17□□□□□ -0.62
TRIO-224ENST00000620511 ME3Q16798 604 aa11.17□□□□□ -0.62
TRIO-224ENST00000620511 MB21D1Q8N884 522 aa11.17□□□□□ -0.62
TRIO-224ENST00000620511 GTF3C2Q8WUA4 911 aaPredicted RBP11.17□□□□□ -0.62
TRIO-224ENST00000620511 ZNF296Q8WUU4 475 aaPredicted RBP11.17□□□□□ -0.62
TRIO-224ENST00000620511 PAGR1Q9BTK6 254 aa11.17□□□□□ -0.62
TRIO-224ENST00000620511 SPZ1Q9BXG8 430 aa11.17□□□□□ -0.62
TRIO-224ENST00000620511 MOV10L1Q9BXT6 1211 aaKnown RBP11.17□□□□□ -0.62
TRIO-224ENST00000620511 NCOA5Q9HCD5 579 aaKnown RBP11.17□□□□□ -0.62
TRIO-224ENST00000620511 GOLGA8AA7E2F4 631 aa11.16□□□□□ -0.62
TRIO-224ENST00000620511 PFKFB2O60825 505 aa11.16□□□□□ -0.62
TRIO-224ENST00000620511 DTNBO60941 627 aa11.16□□□□□ -0.62
TRIO-224ENST00000620511 SMARCA1P28370 1054 aa11.16□□□□□ -0.62
TRIO-224ENST00000620511 KIF5BP33176 963 aa11.16□□□□□ -0.62
TRIO-224ENST00000620511 METAP2P50579 478 aaKnown RBP eCLIP11.16□□□□□ -0.62
TRIO-224ENST00000620511 CCT2P78371 535 aaKnown RBP11.16□□□□□ -0.62
TRIO-224ENST00000620511 SP3Q02447 781 aa11.16□□□□□ -0.62
TRIO-224ENST00000620511 SCRN1Q12765 414 aa11.16□□□□□ -0.62
TRIO-224ENST00000620511 RTN1Q16799 776 aa11.16□□□□□ -0.62
TRIO-224ENST00000620511 GPRC5AQ8NFJ5 357 aa11.16□□□□□ -0.62
TRIO-224ENST00000620511 CTCFLQ8NI51 663 aaPredicted RBP11.16□□□□□ -0.62
TRIO-224ENST00000620511 AGBL1Q96MI9 1066 aa11.16□□□□□ -0.62
TRIO-224ENST00000620511 BEGAINQ9BUH8 593 aa11.16□□□□□ -0.62
TRIO-224ENST00000620511 SPATC1LQ9H0A9 340 aa11.16□□□□□ -0.62
TRIO-224ENST00000620511 RAVER2Q9HCJ3 691 aaKnown RBP11.16□□□□□ -0.62
TRIO-224ENST00000620511 ISY1Q9ULR0 285 aaKnown RBP11.16□□□□□ -0.62
TRIO-224ENST00000620511 CTDNEP1O95476 244 aa11.15□□□□□ -0.62
TRIO-224ENST00000620511 FDX1P10109 184 aa11.15□□□□□ -0.62
TRIO-224ENST00000620511 LACTBP83111 547 aaPredicted RBP11.15□□□□□ -0.62
TRIO-224ENST00000620511 IKQ13123 557 aaPredicted RBP11.15□□□□□ -0.62
TRIO-224ENST00000620511 STK3Q13188 491 aa11.15□□□□□ -0.62
TRIO-224ENST00000620511 ANKRD1Q15327 319 aa11.15□□□□□ -0.62
TRIO-224ENST00000620511 QRICH1Q2TAL8 776 aa11.15□□□□□ -0.62
TRIO-224ENST00000620511 SYNE3Q6ZMZ3 975 aa11.15□□□□□ -0.62
TRIO-224ENST00000620511 NOL8Q76FK4 1167 aaKnown RBP11.15□□□□□ -0.62
TRIO-224ENST00000620511 RIOX2Q8IUF8 465 aa11.15□□□□□ -0.62
TRIO-224ENST00000620511 HSCBQ8IWL3 235 aa11.15□□□□□ -0.62
TRIO-224ENST00000620511 NECAB1Q8N987 351 aa11.15□□□□□ -0.62
TRIO-224ENST00000620511 PIGSQ96S52 555 aa11.15□□□□□ -0.62
TRIO-224ENST00000620511 EFCC1Q9HA90 598 aa11.15□□□□□ -0.62
TRIO-224ENST00000620511 VAT1LQ9HCJ6 419 aa11.15□□□□□ -0.62
TRIO-224ENST00000620511 LCTP09848 1927 aa11.15□□□□□ -0.62
TRIO-224ENST00000620511 CNTNAP5Q8WYK1 1306 aa11.15□□□□□ -0.62
TRIO-224ENST00000620511 hCG_1642624A0A1W2PR95 340 aa11.14□□□□□ -0.63
TRIO-224ENST00000620511 FKTNO75072 461 aa11.14□□□□□ -0.63
TRIO-224ENST00000620511 ZBED4O75132 1171 aa11.14□□□□□ -0.63
TRIO-224ENST00000620511 ICAM1P05362 532 aa11.14□□□□□ -0.63
TRIO-224ENST00000620511 STAT3P40763 770 aa11.14□□□□□ -0.63
TRIO-224ENST00000620511 LBX1P52954 281 aa11.14□□□□□ -0.63
TRIO-224ENST00000620511 OAZ1P54368 228 aa11.14□□□□□ -0.63
TRIO-224ENST00000620511 PPP2R5BQ15173 497 aa11.14□□□□□ -0.63
TRIO-224ENST00000620511 CDC37Q16543 378 aaPredicted RBP11.14□□□□□ -0.63
TRIO-224ENST00000620511 CCDC174Q6PII3 467 aa11.14□□□□□ -0.63
TRIO-224ENST00000620511 CPXCR1Q8N123 301 aa11.14□□□□□ -0.63
TRIO-224ENST00000620511 CCDC82Q8N4S0 544 aa11.14□□□□□ -0.63
TRIO-224ENST00000620511 CD99L2Q8TCZ2 262 aa11.14□□□□□ -0.63
TRIO-224ENST00000620511 TRIM47Q96LD4 638 aa11.14□□□□□ -0.63
TRIO-224ENST00000620511 RBM28Q9NW13 759 aaKnown RBP11.14□□□□□ -0.63
TRIO-224ENST00000620511 NAP1L2Q9ULW6 460 aaPredicted RBP11.14□□□□□ -0.63
TRIO-224ENST00000620511 LIMCH1Q9UPQ0 1083 aa11.14□□□□□ -0.63
TRIO-224ENST00000620511 OPLAHO14841 1288 aa11.14□□□□□ -0.63
TRIO-224ENST00000620511 ZBTB5O15062 677 aa11.14□□□□□ -0.63
TRIO-224ENST00000620511 PPFIA3O75145 1194 aa11.14□□□□□ -0.63
TRIO-224ENST00000620511 IFNAR1P17181 557 aa11.14□□□□□ -0.63
TRIO-224ENST00000620511 ERCC3P19447 782 aa11.14□□□□□ -0.63
TRIO-224ENST00000620511 CTCFP49711 727 aaPredicted RBP11.14□□□□□ -0.63
TRIO-224ENST00000620511 GNAQP50148 359 aa11.14□□□□□ -0.63
TRIO-224ENST00000620511 PKN1Q16512 942 aa11.14□□□□□ -0.63
TRIO-224ENST00000620511 MUM1L1Q5H9M0 696 aa11.14□□□□□ -0.63
TRIO-224ENST00000620511 SNRNP48Q6IEG0 339 aaKnown RBP11.14□□□□□ -0.63
TRIO-224ENST00000620511 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.14□□□□□ -0.63
TRIO-224ENST00000620511 SHCBP1Q8NEM2 672 aa11.14□□□□□ -0.63
TRIO-224ENST00000620511 CLEC4DQ8WXI8 215 aa11.14□□□□□ -0.63
TRIO-224ENST00000620511 GTF3C6Q969F1 213 aa11.14□□□□□ -0.63
TRIO-224ENST00000620511 SHISA4Q96DD7 197 aa11.14□□□□□ -0.63
TRIO-224ENST00000620511 LZTS2Q9BRK4 669 aa11.14□□□□□ -0.63
TRIO-224ENST00000620511 TEX13BQ9BXU2 312 aa11.14□□□□□ -0.63
TRIO-224ENST00000620511 GJD2Q9UKL4 321 aa11.14□□□□□ -0.63
TRIO-224ENST00000620511 PNMA6FA0A0J9YX94 578 aa11.13□□□□□ -0.63
TRIO-224ENST00000620511 ECM2O94769 699 aaPredicted RBP11.13□□□□□ -0.63
TRIO-224ENST00000620511 PLS1Q14651 629 aa11.13□□□□□ -0.63
TRIO-224ENST00000620511 TYW1BQ6NUM6 668 aa11.13□□□□□ -0.63
TRIO-224ENST00000620511 GPR142Q7Z601 462 aa11.13□□□□□ -0.63
TRIO-224ENST00000620511 HOMER1Q86YM7 354 aa11.13□□□□□ -0.63
TRIO-224ENST00000620511 IL27Q8NEV9 243 aa11.13□□□□□ -0.63
TRIO-224ENST00000620511 PIBF1Q8WXW3 757 aa11.13□□□□□ -0.63
TRIO-224ENST00000620511 USP6NLQ92738 828 aa11.13□□□□□ -0.63
TRIO-224ENST00000620511 PHKBQ93100 1093 aa11.13□□□□□ -0.63
TRIO-224ENST00000620511 V9GY48 417 aaPredicted RBP11.13□□□□□ -0.63
TRIO-224ENST00000620511 ZNF236Q9UL36 1845 aa11.13□□□□□ -0.63
TRIO-224ENST00000620511 PLXNA1Q9UIW2 1896 aa11.13□□□□□ -0.63
TRIO-224ENST00000620511 CCDC196A0A1B0GTZ2 297 aa11.12□□□□□ -0.63
TRIO-224ENST00000620511 MAPK4P31152 587 aa11.12□□□□□ -0.63
TRIO-224ENST00000620511 PSMC4P43686 418 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 72.5 ms