RNA–Protein interactions for RNA: ENST00000616247.4

LMO3-235, Transcript of LIM domain only 3, humanhuman

TSL 5 BASIC

Gene LMO3, Length 3,227 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-235ENST00000616247 PIH1D3Q9NQM4 214 aaKnown RBP7.42□□□□□ -1.22
LMO3-235ENST00000616247 HAUS2Q9NVX0 235 aa7.42□□□□□ -1.22
LMO3-235ENST00000616247 STIM2Q9P246 746 aa7.42□□□□□ -1.22
LMO3-235ENST00000616247 RIPOR2Q9Y4F9 1068 aa7.42□□□□□ -1.22
LMO3-235ENST00000616247 CAPN6Q9Y6Q1 641 aa7.42□□□□□ -1.22
LMO3-235ENST00000616247 TUBGCP6Q96RT7 1819 aa7.42□□□□□ -1.22
LMO3-235ENST00000616247 TARSL2A2RTX5 802 aaKnown RBP7.42□□□□□ -1.22
LMO3-235ENST00000616247 PDE6AP16499 860 aa7.42□□□□□ -1.22
LMO3-235ENST00000616247 PBX1P40424 430 aa7.42□□□□□ -1.22
LMO3-235ENST00000616247 RASSF7Q02833 373 aa7.42□□□□□ -1.22
LMO3-235ENST00000616247 TCIRG1Q13488 830 aa7.42□□□□□ -1.22
LMO3-235ENST00000616247 TMC4Q7Z404 712 aa7.42□□□□□ -1.22
LMO3-235ENST00000616247 NLRP14Q86W24 1093 aa7.42□□□□□ -1.22
LMO3-235ENST00000616247 CCDC13Q8IYE1 715 aa7.42□□□□□ -1.22
LMO3-235ENST00000616247 CRACR2BQ8N4Y2 399 aaPredicted RBP7.42□□□□□ -1.22
LMO3-235ENST00000616247 TUBGCP2Q9BSJ2 902 aa7.42□□□□□ -1.22
LMO3-235ENST00000616247 SLC40A1Q9NP59 571 aa7.42□□□□□ -1.22
LMO3-235ENST00000616247 NLRC4Q9NPP4 1024 aa7.42□□□□□ -1.22
LMO3-235ENST00000616247 LRP2BPQ9P2M1 347 aa7.42□□□□□ -1.22
LMO3-235ENST00000616247 AXIN2Q9Y2T1 843 aa7.42□□□□□ -1.22
LMO3-235ENST00000616247 TLDC2A0PJX2 215 aa7.42□□□□□ -1.22
LMO3-235ENST00000616247 WNT7AO00755 349 aa7.42□□□□□ -1.22
LMO3-235ENST00000616247 FTCDO95954 541 aa7.42□□□□□ -1.22
LMO3-235ENST00000616247 CLTAP09496 248 aa7.42□□□□□ -1.22
LMO3-235ENST00000616247 FAM153BP0C7A2 387 aa7.42□□□□□ -1.22
LMO3-235ENST00000616247 TMOD1P28289 359 aa7.42□□□□□ -1.22
LMO3-235ENST00000616247 PHKA1P46020 1223 aa7.42□□□□□ -1.22
LMO3-235ENST00000616247 PPP1R7Q15435 360 aa7.42□□□□□ -1.22
LMO3-235ENST00000616247 CHRNA2Q15822 529 aa7.42□□□□□ -1.22
LMO3-235ENST00000616247 FAM153CQ494X1 144 aa7.42□□□□□ -1.22
LMO3-235ENST00000616247 MSL1Q68DK7 614 aa7.42□□□□□ -1.22
LMO3-235ENST00000616247 RRAGAQ7L523 313 aa7.42□□□□□ -1.22
LMO3-235ENST00000616247 TAX1BP1Q86VP1 789 aa7.42□□□□□ -1.22
LMO3-235ENST00000616247 IFT20Q8IY31 132 aa7.42□□□□□ -1.22
LMO3-235ENST00000616247 IFNL3Q8IZI9 196 aa7.42□□□□□ -1.22
LMO3-235ENST00000616247 CNPY4Q8N129 248 aa7.42□□□□□ -1.22
LMO3-235ENST00000616247 MSL3Q8N5Y2 521 aaKnown RBP7.42□□□□□ -1.22
LMO3-235ENST00000616247 UBLCP1Q8WVY7 318 aaPredicted RBP7.42□□□□□ -1.22
LMO3-235ENST00000616247 TCP11Q8WWU5 503 aa7.42□□□□□ -1.22
LMO3-235ENST00000616247 CCDC47Q96A33 483 aaKnown RBP7.42□□□□□ -1.22
LMO3-235ENST00000616247 TACO1Q9BSH4 297 aaKnown RBP7.42□□□□□ -1.22
LMO3-235ENST00000616247 CCDC113Q9H0I3 377 aa7.42□□□□□ -1.22
LMO3-235ENST00000616247 RBM12Q9NTZ6 932 aaKnown RBP7.42□□□□□ -1.22
LMO3-235ENST00000616247 LIMA1Q9UHB6 759 aaKnown RBP7.42□□□□□ -1.22
LMO3-235ENST00000616247 FAM153AQ9UHL3 310 aa7.42□□□□□ -1.22
LMO3-235ENST00000616247 RWDD2AQ9UIY3 292 aa7.42□□□□□ -1.22
LMO3-235ENST00000616247 PACSIN2Q9UNF0 486 aaPredicted RBP7.42□□□□□ -1.22
LMO3-235ENST00000616247 WDR3Q9UNX4 943 aaKnown RBP eCLIP7.42□□□□□ -1.22
LMO3-235ENST00000616247 SSUH2Q9Y2M2 353 aa7.42□□□□□ -1.22
LMO3-235ENST00000616247 CPDO75976 1380 aa7.42□□□□□ -1.22
LMO3-235ENST00000616247 RFX7Q2KHR2 1363 aa7.42□□□□□ -1.22
LMO3-235ENST00000616247 TNRQ92752 1358 aa7.42□□□□□ -1.22
LMO3-235ENST00000616247 FAM237AA0A1B0GTK4 181 aa7.41□□□□□ -1.22
LMO3-235ENST00000616247 A0A1B0GUA9 196 aa7.41□□□□□ -1.22
LMO3-235ENST00000616247 PP2D1A8MPX8 630 aa7.41□□□□□ -1.22
LMO3-235ENST00000616247 PPP1R37O75864 691 aa7.41□□□□□ -1.22
LMO3-235ENST00000616247 ADD2P35612 726 aa7.41□□□□□ -1.22
LMO3-235ENST00000616247 GSCP56915 257 aaPredicted RBP7.41□□□□□ -1.22
LMO3-235ENST00000616247 AKNAD1Q5T1N1 836 aa7.41□□□□□ -1.22
LMO3-235ENST00000616247 NT5DC1Q5TFE4 455 aa7.41□□□□□ -1.22
LMO3-235ENST00000616247 PAPD7Q5XG87 772 aaKnown RBP7.41□□□□□ -1.22
LMO3-235ENST00000616247 PRPF38AQ8NAV1 312 aaKnown RBP7.41□□□□□ -1.22
LMO3-235ENST00000616247 TRIM58Q8NG06 486 aa7.41□□□□□ -1.22
LMO3-235ENST00000616247 ZNF622Q969S3 477 aaKnown RBP eCLIP7.41□□□□□ -1.22
LMO3-235ENST00000616247 OSBPL9Q96SU4 736 aa7.41□□□□□ -1.22
LMO3-235ENST00000616247 TRIM31Q9BZY9 425 aa7.41□□□□□ -1.22
LMO3-235ENST00000616247 RMND1Q9NWS8 449 aa7.41□□□□□ -1.22
LMO3-235ENST00000616247 AATFQ9NY61 560 aaKnown RBP eCLIP7.41□□□□□ -1.22
LMO3-235ENST00000616247 SNX12Q9UMY4 172 aa7.41□□□□□ -1.22
LMO3-235ENST00000616247 GRIN2DO15399 1336 aa7.41□□□□□ -1.22
LMO3-235ENST00000616247 TMEM2Q9UHN6 1383 aa7.41□□□□□ -1.22
LMO3-235ENST00000616247 ANKRD18BA2A2Z9 1011 aa7.41□□□□□ -1.22
LMO3-235ENST00000616247 H7C1D1 291 aa7.41□□□□□ -1.22
LMO3-235ENST00000616247 CHRM1P11229 460 aaPredicted RBP7.41□□□□□ -1.22
LMO3-235ENST00000616247 GCKP35557 465 aa7.41□□□□□ -1.22
LMO3-235ENST00000616247 EIF4A3P38919 411 aaKnown RBP7.41□□□□□ -1.22
LMO3-235ENST00000616247 PMS1P54277 932 aaKnown RBP7.41□□□□□ -1.22
LMO3-235ENST00000616247 ASIC1P78348 528 aa7.41□□□□□ -1.22
LMO3-235ENST00000616247 IFFO1Q0D2I5 559 aa7.41□□□□□ -1.22
LMO3-235ENST00000616247 MAP3K12Q12852 859 aa7.41□□□□□ -1.22
LMO3-235ENST00000616247 NAIF1Q69YI7 327 aaPredicted RBP7.41□□□□□ -1.22
LMO3-235ENST00000616247 HIBCHQ6NVY1 386 aaPredicted RBP7.41□□□□□ -1.22
LMO3-235ENST00000616247 ANKLE2Q86XL3 938 aa7.41□□□□□ -1.22
LMO3-235ENST00000616247 RASGRP4Q8TDF6 673 aa7.41□□□□□ -1.22
LMO3-235ENST00000616247 KRT23Q9C075 422 aa7.41□□□□□ -1.22
LMO3-235ENST00000616247 GOPCQ9HD26 462 aa7.41□□□□□ -1.22
LMO3-235ENST00000616247 EXOC1Q9NV70 894 aa7.41□□□□□ -1.22
LMO3-235ENST00000616247 HYOU1Q9Y4L1 999 aa7.41□□□□□ -1.22
LMO3-235ENST00000616247 XDHP47989 1333 aa7.41□□□□□ -1.22
LMO3-235ENST00000616247 FAM208AQ9UK61 1670 aaKnown RBP7.41□□□□□ -1.22
LMO3-235ENST00000616247 LGALS16A8MUM7 142 aa7.4□□□□□ -1.22
LMO3-235ENST00000616247 TMCO5BA8MYB1 307 aa7.4□□□□□ -1.22
LMO3-235ENST00000616247 H7C1W4 665 aa7.4□□□□□ -1.22
LMO3-235ENST00000616247 GTPBP6O43824 516 aaPredicted RBP7.4□□□□□ -1.22
LMO3-235ENST00000616247 BUB1BO60566 1050 aaPredicted RBP7.4□□□□□ -1.22
LMO3-235ENST00000616247 SHOX2O60902 331 aaPredicted RBP7.4□□□□□ -1.22
LMO3-235ENST00000616247 PLEKHA8P1O95397 391 aa7.4□□□□□ -1.22
LMO3-235ENST00000616247 CDC25CP30307 473 aa7.4□□□□□ -1.22
LMO3-235ENST00000616247 DNM2P50570 870 aa7.4□□□□□ -1.22
LMO3-235ENST00000616247 PAK2Q13177 524 aa7.4□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms