RNA–Protein interactions for RNA: ENST00000611733.4

CLK4-215, Transcript of CDC like kinase 4, humanhuman

TSL 5 BASIC

Gene CLK4, Length 2,182 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-215ENST00000611733 R3HDMLQ9H3Y0 253 aa13.96□□□□□ -0.17
CLK4-215ENST00000611733 SLC38A10Q9HBR0 1119 aa13.96□□□□□ -0.17
CLK4-215ENST00000611733 RAVER2Q9HCJ3 691 aaKnown RBP13.96□□□□□ -0.17
CLK4-215ENST00000611733 RBPJLQ9UBG7 517 aa13.96□□□□□ -0.17
CLK4-215ENST00000611733 CNMDO75829 334 aa13.96□□□□□ -0.18
CLK4-215ENST00000611733 INHBEP58166 350 aa13.96□□□□□ -0.18
CLK4-215ENST00000611733 TMEM132BQ14DG7 1078 aa13.96□□□□□ -0.18
CLK4-215ENST00000611733 Q3C1V9 767 aa13.96□□□□□ -0.18
CLK4-215ENST00000611733 OTUD7BQ6GQQ9 843 aa13.96□□□□□ -0.18
CLK4-215ENST00000611733 TYW1BQ6NUM6 668 aa13.96□□□□□ -0.18
CLK4-215ENST00000611733 SMC3Q9UQE7 1217 aa13.96□□□□□ -0.18
CLK4-215ENST00000611733 PNMA6FA0A0J9YX94 578 aa13.95□□□□□ -0.18
CLK4-215ENST00000611733 ZBTB5O15062 677 aa13.95□□□□□ -0.18
CLK4-215ENST00000611733 CDKL5O76039 1030 aa13.95□□□□□ -0.18
CLK4-215ENST00000611733 HSP90AA1P07900 732 aaKnown RBP13.95□□□□□ -0.18
CLK4-215ENST00000611733 SREBF2Q12772 1141 aa13.95□□□□□ -0.18
CLK4-215ENST00000611733 PABPC4Q13310 644 aaKnown RBP eCLIP13.95□□□□□ -0.18
CLK4-215ENST00000611733 INTS4Q96HW7 963 aaKnown RBP13.95□□□□□ -0.18
CLK4-215ENST00000611733 PAGR1Q9BTK6 254 aa13.95□□□□□ -0.18
CLK4-215ENST00000611733 SLC45A1Q9Y2W3 748 aa13.95□□□□□ -0.18
CLK4-215ENST00000611733 RIPK3Q9Y572 518 aa13.95□□□□□ -0.18
CLK4-215ENST00000611733 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.95□□□□□ -0.18
CLK4-215ENST00000611733 ADAMTS3O15072 1205 aa13.95□□□□□ -0.18
CLK4-215ENST00000611733 PFKFB3Q16875 520 aaPredicted RBP13.95□□□□□ -0.18
CLK4-215ENST00000611733 USH1GQ495M9 461 aa13.95□□□□□ -0.18
CLK4-215ENST00000611733 WWC2Q6AWC2 1192 aa13.95□□□□□ -0.18
CLK4-215ENST00000611733 LBX2Q6XYB7 198 aa13.95□□□□□ -0.18
CLK4-215ENST00000611733 TRIM22Q8IYM9 498 aa13.95□□□□□ -0.18
CLK4-215ENST00000611733 ZBED4O75132 1171 aa13.94□□□□□ -0.18
CLK4-215ENST00000611733 DEXIO95424 95 aa13.94□□□□□ -0.18
CLK4-215ENST00000611733 SCG2P13521 617 aa13.94□□□□□ -0.18
CLK4-215ENST00000611733 AKAP17AQ02040 695 aaKnown RBP13.94□□□□□ -0.18
CLK4-215ENST00000611733 HEATR3Q7Z4Q2 680 aa13.94□□□□□ -0.18
CLK4-215ENST00000611733 IPO9Q96P70 1041 aaKnown RBP13.94□□□□□ -0.18
CLK4-215ENST00000611733 VPS54Q9P1Q0 977 aa13.94□□□□□ -0.18
CLK4-215ENST00000611733 ZNF214Q9UL59 606 aaPredicted RBP13.94□□□□□ -0.18
CLK4-215ENST00000611733 PARP14Q460N5 1801 aa13.94□□□□□ -0.18
CLK4-215ENST00000611733 PLS1Q14651 629 aa13.93□□□□□ -0.18
CLK4-215ENST00000611733 TAF1CQ15572 869 aaPredicted RBP13.93□□□□□ -0.18
CLK4-215ENST00000611733 ANKRD13CQ8N6S4 541 aa13.93□□□□□ -0.18
CLK4-215ENST00000611733 SMCR8Q8TEV9 937 aaPredicted RBP13.93□□□□□ -0.18
CLK4-215ENST00000611733 ALG1Q9BT22 464 aa13.93□□□□□ -0.18
CLK4-215ENST00000611733 SEC63Q9UGP8 760 aaKnown RBP13.93□□□□□ -0.18
CLK4-215ENST00000611733 CPA4Q9UI42 421 aa13.93□□□□□ -0.18
CLK4-215ENST00000611733 MYPNQ86TC9 1320 aa13.93□□□□□ -0.18
CLK4-215ENST00000611733 STK36Q9NRP7 1315 aa13.93□□□□□ -0.18
CLK4-215ENST00000611733 MAP2K2P36507 400 aa13.93□□□□□ -0.18
CLK4-215ENST00000611733 GUCY1B3Q02153 619 aa13.93□□□□□ -0.18
CLK4-215ENST00000611733 CRHR2Q13324 411 aa13.93□□□□□ -0.18
CLK4-215ENST00000611733 FBXO11Q86XK2 927 aa13.93□□□□□ -0.18
CLK4-215ENST00000611733 DNAJC5GQ8N7S2 189 aa13.93□□□□□ -0.18
CLK4-215ENST00000611733 PNMA3Q9UL41 463 aa13.93□□□□□ -0.18
CLK4-215ENST00000611733 KCNJ14Q9UNX9 436 aa13.93□□□□□ -0.18
CLK4-215ENST00000611733 PCDHA1Q9Y5I3 950 aa13.93□□□□□ -0.18
CLK4-215ENST00000611733 STXBP3O00186 592 aa13.92□□□□□ -0.18
CLK4-215ENST00000611733 ECM2O94769 699 aaPredicted RBP13.92□□□□□ -0.18
CLK4-215ENST00000611733 ICAM1P05362 532 aa13.92□□□□□ -0.18
CLK4-215ENST00000611733 HMGN5P82970 282 aaKnown RBP13.92□□□□□ -0.18
CLK4-215ENST00000611733 FAM184AQ8NB25 1140 aa13.92□□□□□ -0.18
CLK4-215ENST00000611733 TBC1D5Q92609 795 aa13.92□□□□□ -0.18
CLK4-215ENST00000611733 PARK7Q99497 189 aaKnown RBP13.92□□□□□ -0.18
CLK4-215ENST00000611733 HOMER2Q9NSB8 354 aa13.92□□□□□ -0.18
CLK4-215ENST00000611733 CCPG1Q9ULG6 757 aa13.92□□□□□ -0.18
CLK4-215ENST00000611733 CTDP1Q9Y5B0 961 aaPredicted RBP13.92□□□□□ -0.18
CLK4-215ENST00000611733 PCNTO95613 3336 aa13.92□□□□□ -0.18
CLK4-215ENST00000611733 SMCHD1A6NHR9 2005 aa13.92□□□□□ -0.18
CLK4-215ENST00000611733 STAT3P40763 770 aa13.92□□□□□ -0.18
CLK4-215ENST00000611733 MUM1L1Q5H9M0 696 aa13.92□□□□□ -0.18
CLK4-215ENST00000611733 SNRNP48Q6IEG0 339 aaKnown RBP13.92□□□□□ -0.18
CLK4-215ENST00000611733 AMNQ9BXJ7 453 aa13.92□□□□□ -0.18
CLK4-215ENST00000611733 ADGRA2Q96PE1 1338 aa13.92□□□□□ -0.18
CLK4-215ENST00000611733 OPLAHO14841 1288 aa13.91□□□□□ -0.18
CLK4-215ENST00000611733 TRPA1O75762 1119 aa13.91□□□□□ -0.18
CLK4-215ENST00000611733 TBC1D8O95759 1140 aa13.91□□□□□ -0.18
CLK4-215ENST00000611733 ALAS1P13196 640 aa13.91□□□□□ -0.18
CLK4-215ENST00000611733 SPATC1LQ9H0A9 340 aa13.91□□□□□ -0.18
CLK4-215ENST00000611733 ZCCHC17Q9NP64 241 aaKnown RBP13.91□□□□□ -0.18
CLK4-215ENST00000611733 RNF186Q9NXI6 227 aa13.91□□□□□ -0.18
CLK4-215ENST00000611733 BARHL2Q9NY43 387 aa13.91□□□□□ -0.18
CLK4-215ENST00000611733 RABGAP1Q9Y3P9 1069 aa13.91□□□□□ -0.18
CLK4-215ENST00000611733 PKP1Q13835 747 aa13.9□□□□□ -0.18
CLK4-215ENST00000611733 LARP1BQ659C4 914 aaKnown RBP13.9□□□□□ -0.18
CLK4-215ENST00000611733 MOV10L1Q9BXT6 1211 aaKnown RBP13.9□□□□□ -0.18
CLK4-215ENST00000611733 PORCNQ9H237 461 aa13.9□□□□□ -0.18
CLK4-215ENST00000611733 COL11A1P12107 1806 aaPredicted RBP13.9□□□□□ -0.18
CLK4-215ENST00000611733 ATP2A1O14983 1001 aa13.9□□□□□ -0.18
CLK4-215ENST00000611733 CA12O43570 354 aa13.9□□□□□ -0.18
CLK4-215ENST00000611733 TLR2O60603 784 aa13.9□□□□□ -0.18
CLK4-215ENST00000611733 FDX1P10109 184 aa13.9□□□□□ -0.18
CLK4-215ENST00000611733 NAPAP54920 295 aa13.9□□□□□ -0.18
CLK4-215ENST00000611733 ERVK-9P63128 1117 aa13.9□□□□□ -0.18
CLK4-215ENST00000611733 ERVK-24P63145 666 aa13.9□□□□□ -0.18
CLK4-215ENST00000611733 KRT40Q6A162 431 aa13.9□□□□□ -0.18
CLK4-215ENST00000611733 C17orf99Q6UX52 265 aa13.9□□□□□ -0.18
CLK4-215ENST00000611733 MB21D1Q8N884 522 aa13.9□□□□□ -0.18
CLK4-215ENST00000611733 CLEC4DQ8WXI8 215 aa13.9□□□□□ -0.18
CLK4-215ENST00000611733 ZFYVE28Q9HCC9 887 aa13.9□□□□□ -0.18
CLK4-215ENST00000611733 RBM27Q9P2N5 1060 aaKnown RBP13.9□□□□□ -0.18
CLK4-215ENST00000611733 DAXXQ9UER7 740 aaPredicted RBP13.9□□□□□ -0.18
CLK4-215ENST00000611733 CEP350Q5VT06 3117 aa13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms