RNA–Protein interactions for RNA: ENST00000609574.1

HDDC2-210, Transcript of HD domain containing 2, humanhuman

TSL 2

Gene HDDC2, Length 607 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC2-210ENST00000609574 IKQ13123 557 aaPredicted RBP18.85■□□□□ 0.61
HDDC2-210ENST00000609574 ATXN2LQ8WWM7 1075 aaKnown RBP18.85■□□□□ 0.61
HDDC2-210ENST00000609574 SEZ6LQ9BYH1 1024 aa18.85■□□□□ 0.61
HDDC2-210ENST00000609574 NACAP1Q9BZK3 213 aa18.85■□□□□ 0.61
HDDC2-210ENST00000609574 PPP1R12CQ9BZL4 782 aa18.85■□□□□ 0.61
HDDC2-210ENST00000609574 AP5M1Q9H0R1 490 aa18.85■□□□□ 0.61
HDDC2-210ENST00000609574 UPF3AQ9H1J1 476 aaKnown RBP18.85■□□□□ 0.61
HDDC2-210ENST00000609574 TSPYL2Q9H2G4 693 aaPredicted RBP18.85■□□□□ 0.61
HDDC2-210ENST00000609574 SLC38A10Q9HBR0 1119 aa18.85■□□□□ 0.61
HDDC2-210ENST00000609574 MYADML2A6NDP7 307 aa18.84■□□□□ 0.61
HDDC2-210ENST00000609574 TTLL1O95922 423 aa18.84■□□□□ 0.61
HDDC2-210ENST00000609574 FGBP02675 491 aa18.84■□□□□ 0.61
HDDC2-210ENST00000609574 TNFAIP2Q03169 654 aa18.84■□□□□ 0.61
HDDC2-210ENST00000609574 PPP4R3BQ5MIZ7 849 aa18.84■□□□□ 0.61
HDDC2-210ENST00000609574 AKNAD1Q5T1N1 836 aa18.84■□□□□ 0.61
HDDC2-210ENST00000609574 ZNF365Q70YC5 407 aa18.84■□□□□ 0.61
HDDC2-210ENST00000609574 ARMCX2Q7L311 632 aa18.84■□□□□ 0.61
HDDC2-210ENST00000609574 SIRT2Q8IXJ6 389 aa18.84■□□□□ 0.61
HDDC2-210ENST00000609574 CHURC1Q8WUH1 139 aa18.84■□□□□ 0.61
HDDC2-210ENST00000609574 MKL1Q969V6 931 aa18.84■□□□□ 0.61
HDDC2-210ENST00000609574 PBX4Q9BYU1 374 aa18.84■□□□□ 0.61
HDDC2-210ENST00000609574 ECHDC1Q9NTX5 307 aa18.84■□□□□ 0.61
HDDC2-210ENST00000609574 ZNFX1Q9P2E3 1918 aaKnown RBP18.84■□□□□ 0.61
HDDC2-210ENST00000609574 TTC28Q96AY4 2481 aa18.83■□□□□ 0.61
HDDC2-210ENST00000609574 VCANP13611 3396 aa18.83■□□□□ 0.61
HDDC2-210ENST00000609574 ASB14A6NK59 587 aa18.83■□□□□ 0.6
HDDC2-210ENST00000609574 GSG1L2A8MUP6 293 aa18.83■□□□□ 0.6
HDDC2-210ENST00000609574 ZFYP08048 801 aaPredicted RBP18.83■□□□□ 0.6
HDDC2-210ENST00000609574 TSPY3P0CV98 308 aa18.83■□□□□ 0.6
HDDC2-210ENST00000609574 TSPY8P0CW00 308 aa18.83■□□□□ 0.6
HDDC2-210ENST00000609574 ACRP10323 421 aa18.83■□□□□ 0.6
HDDC2-210ENST00000609574 BMP3P12645 472 aa18.83■□□□□ 0.6
HDDC2-210ENST00000609574 IGFBP4P22692 258 aa18.83■□□□□ 0.6
HDDC2-210ENST00000609574 PDE4BQ07343 736 aa18.83■□□□□ 0.6
HDDC2-210ENST00000609574 SLFN13Q68D06 897 aa18.83■□□□□ 0.6
HDDC2-210ENST00000609574 DHX30Q7L2E3 1194 aaKnown RBP eCLIP18.83■□□□□ 0.6
HDDC2-210ENST00000609574 CCDC144CPQ8IYA2 1237 aa18.83■□□□□ 0.6
HDDC2-210ENST00000609574 ACAD9Q9H845 621 aa18.83■□□□□ 0.6
HDDC2-210ENST00000609574 IL23AQ9NPF7 189 aa18.83■□□□□ 0.6
HDDC2-210ENST00000609574 HOMER2Q9NSB8 354 aa18.83■□□□□ 0.6
HDDC2-210ENST00000609574 RNF113AO15541 343 aaKnown RBP18.82■□□□□ 0.6
HDDC2-210ENST00000609574 CHGBP05060 677 aa18.82■□□□□ 0.6
HDDC2-210ENST00000609574 FAM160B2Q86V87 743 aa18.82■□□□□ 0.6
HDDC2-210ENST00000609574 RPUSD2Q8IZ73 545 aaKnown RBP18.82■□□□□ 0.6
HDDC2-210ENST00000609574 KBTBD3Q8NAB2 608 aa18.82■□□□□ 0.6
HDDC2-210ENST00000609574 GMCL1P1Q8NEA9 526 aa18.82■□□□□ 0.6
HDDC2-210ENST00000609574 APPBP2Q92624 585 aa18.82■□□□□ 0.6
HDDC2-210ENST00000609574 PRDM12Q9H4Q4 367 aa18.82■□□□□ 0.6
HDDC2-210ENST00000609574 SLC28A3Q9HAS3 691 aa18.82■□□□□ 0.6
HDDC2-210ENST00000609574 MTMR4Q9NYA4 1195 aa18.82■□□□□ 0.6
HDDC2-210ENST00000609574 THEGQ9P2T0 379 aa18.82■□□□□ 0.6
HDDC2-210ENST00000609574 MYH8P13535 1937 aa18.82■□□□□ 0.6
HDDC2-210ENST00000609574 GRXCR1A8MXD5 290 aa18.81■□□□□ 0.6
HDDC2-210ENST00000609574 TMEM232C9JQI7 657 aa18.81■□□□□ 0.6
HDDC2-210ENST00000609574 STAT2P52630 851 aa18.81■□□□□ 0.6
HDDC2-210ENST00000609574 MRPS5P82675 430 aaKnown RBP18.81■□□□□ 0.6
HDDC2-210ENST00000609574 TKFCQ3LXA3 575 aa18.81■□□□□ 0.6
HDDC2-210ENST00000609574 C16orf59Q7L2K0 433 aa18.81■□□□□ 0.6
HDDC2-210ENST00000609574 FAM126BQ8IXS8 530 aa18.81■□□□□ 0.6
HDDC2-210ENST00000609574 USP38Q8NB14 1042 aa18.81■□□□□ 0.6
HDDC2-210ENST00000609574 HERVK_113Q902F9 699 aa18.81■□□□□ 0.6
HDDC2-210ENST00000609574 CEP95Q96GE4 821 aa18.81■□□□□ 0.6
HDDC2-210ENST00000609574 HIPK3Q9H422 1215 aa18.81■□□□□ 0.6
HDDC2-210ENST00000609574 PRDM1O75626 825 aa18.8■□□□□ 0.6
HDDC2-210ENST00000609574 CYP2C18P33260 490 aa18.8■□□□□ 0.6
HDDC2-210ENST00000609574 PBX2P40425 430 aa18.8■□□□□ 0.6
HDDC2-210ENST00000609574 RASIP1Q5U651 963 aa18.8■□□□□ 0.6
HDDC2-210ENST00000609574 LRRC47Q8N1G4 583 aaKnown RBP18.8■□□□□ 0.6
HDDC2-210ENST00000609574 BAZ2AQ9UIF9 1905 aaKnown RBP18.79■□□□□ 0.6
HDDC2-210ENST00000609574 IGKV6D-41A0A0C4DH26 115 aa18.79■□□□□ 0.6
HDDC2-210ENST00000609574 PATL2C9JE40 543 aaKnown RBP18.79■□□□□ 0.6
HDDC2-210ENST00000609574 GPAA1O43292 621 aa18.79■□□□□ 0.6
HDDC2-210ENST00000609574 SMARCA5O60264 1052 aaPredicted RBP18.79■□□□□ 0.6
HDDC2-210ENST00000609574 SLC1A4P43007 532 aa18.79■□□□□ 0.6
HDDC2-210ENST00000609574 BEX3Q00994 111 aa18.79■□□□□ 0.6
HDDC2-210ENST00000609574 ITGA7Q13683 1181 aa18.79■□□□□ 0.6
HDDC2-210ENST00000609574 CCDC85BQ15834 202 aaPredicted RBP18.79■□□□□ 0.6
HDDC2-210ENST00000609574 FSCN1Q16658 493 aaKnown RBP18.79■□□□□ 0.6
HDDC2-210ENST00000609574 CXCL17Q6UXB2 119 aa18.79■□□□□ 0.6
HDDC2-210ENST00000609574 OSBP2Q969R2 916 aa18.79■□□□□ 0.6
HDDC2-210ENST00000609574 ASB2Q96Q27 587 aa18.79■□□□□ 0.6
HDDC2-210ENST00000609574 RNF146Q9NTX7 359 aa18.79■□□□□ 0.6
HDDC2-210ENST00000609574 DYNC1LI2O43237 492 aaPredicted RBP18.78■□□□□ 0.6
HDDC2-210ENST00000609574 CD4P01730 458 aa18.78■□□□□ 0.6
HDDC2-210ENST00000609574 NKX3-2P78367 333 aa18.78■□□□□ 0.6
HDDC2-210ENST00000609574 IRX5P78411 483 aaPredicted RBP18.78■□□□□ 0.6
HDDC2-210ENST00000609574 CNTN2Q02246 1040 aa18.78■□□□□ 0.6
HDDC2-210ENST00000609574 IQSEC1Q6DN90 963 aa18.78■□□□□ 0.6
HDDC2-210ENST00000609574 TLK2Q86UE8 772 aa18.78■□□□□ 0.6
HDDC2-210ENST00000609574 NEDD1Q8NHV4 660 aa18.78■□□□□ 0.6
HDDC2-210ENST00000609574 STAG1Q8WVM7 1258 aa18.78■□□□□ 0.6
HDDC2-210ENST00000609574 TRERF1Q96PN7 1200 aa18.78■□□□□ 0.6
HDDC2-210ENST00000609574 PLXNA1Q9UIW2 1896 aa18.77■□□□□ 0.6
HDDC2-210ENST00000609574 COL11A1P12107 1806 aaPredicted RBP18.77■□□□□ 0.6
HDDC2-210ENST00000609574 ALAS1P13196 640 aa18.77■□□□□ 0.6
HDDC2-210ENST00000609574 COL9A1P20849 921 aa18.77■□□□□ 0.6
HDDC2-210ENST00000609574 TFAP4Q01664 338 aa18.77■□□□□ 0.6
HDDC2-210ENST00000609574 OTOP2Q7RTS6 562 aa18.77■□□□□ 0.6
HDDC2-210ENST00000609574 IFNL3Q8IZI9 196 aa18.77■□□□□ 0.6
HDDC2-210ENST00000609574 FAM133AQ8N9E0 248 aa18.77■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 179.3 ms