RNA–Protein interactions for RNA: ENST00000601912.5

VRK3-225, Transcript of vaccinia related kinase 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VRK3, Length 1,668 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-225ENST00000601912 ADCY7P51828 1080 aa20.61■□□□□ 0.89
VRK3-225ENST00000601912 PIK3AP1Q6ZUJ8 805 aa20.61■□□□□ 0.89
VRK3-225ENST00000601912 FBXO11Q86XK2 927 aa20.61■□□□□ 0.89
VRK3-225ENST00000601912 KIFC2Q96AC6 838 aa20.61■□□□□ 0.89
VRK3-225ENST00000601912 GLT8D2Q9H1C3 349 aa20.61■□□□□ 0.89
VRK3-225ENST00000601912 CEP131Q9UPN4 1083 aa20.61■□□□□ 0.89
VRK3-225ENST00000601912 PCDHA1Q9Y5I3 950 aa20.61■□□□□ 0.89
VRK3-225ENST00000601912 SPTLC2O15270 562 aa20.61■□□□□ 0.89
VRK3-225ENST00000601912 ME1P48163 572 aa20.61■□□□□ 0.89
VRK3-225ENST00000601912 TRAPPC10P48553 1259 aa20.61■□□□□ 0.89
VRK3-225ENST00000601912 TOB1P50616 345 aaPredicted RBP20.61■□□□□ 0.89
VRK3-225ENST00000601912 SLC39A14Q15043 492 aa20.61■□□□□ 0.89
VRK3-225ENST00000601912 ARMC9Q7Z3E5 817 aa20.61■□□□□ 0.89
VRK3-225ENST00000601912 ANKRD13AQ8IZ07 590 aa20.61■□□□□ 0.89
VRK3-225ENST00000601912 JMYQ8N9B5 988 aa20.61■□□□□ 0.89
VRK3-225ENST00000601912 EMILIN3Q9NT22 766 aa20.61■□□□□ 0.89
VRK3-225ENST00000601912 PCDHA6Q9UN73 950 aa20.61■□□□□ 0.89
VRK3-225ENST00000601912 PCDHA8Q9Y5H6 950 aa20.61■□□□□ 0.89
VRK3-225ENST00000601912 M0R2N6 131 aa20.6■□□□□ 0.89
VRK3-225ENST00000601912 MRPL12P52815 198 aaKnown RBP20.6■□□□□ 0.89
VRK3-225ENST00000601912 TPRNQ4KMQ1 711 aa20.6■□□□□ 0.89
VRK3-225ENST00000601912 RBM46Q8TBY0 533 aaKnown RBP20.6■□□□□ 0.89
VRK3-225ENST00000601912 SNCAIPQ9Y6H5 919 aa20.6■□□□□ 0.89
VRK3-225ENST00000601912 VCAM1P19320 739 aa20.59■□□□□ 0.89
VRK3-225ENST00000601912 ATP2B1P20020 1258 aa20.59■□□□□ 0.89
VRK3-225ENST00000601912 MAP3K11Q16584 847 aa20.59■□□□□ 0.89
VRK3-225ENST00000601912 EARS2Q5JPH6 523 aaKnown RBP20.59■□□□□ 0.89
VRK3-225ENST00000601912 KRT25Q7Z3Z0 450 aa20.59■□□□□ 0.89
VRK3-225ENST00000601912 REXO1Q8N1G1 1221 aaKnown RBP20.59■□□□□ 0.89
VRK3-225ENST00000601912 PRPF38AQ8NAV1 312 aaKnown RBP20.59■□□□□ 0.89
VRK3-225ENST00000601912 CUL5Q93034 780 aa20.59■□□□□ 0.89
VRK3-225ENST00000601912 TANGO6Q9C0B7 1094 aa20.59■□□□□ 0.89
VRK3-225ENST00000601912 RIC8AQ9NPQ8 531 aa20.59■□□□□ 0.89
VRK3-225ENST00000601912 TMOD4Q9NZQ9 345 aa20.59■□□□□ 0.89
VRK3-225ENST00000601912 AFG3L2Q9Y4W6 797 aa20.59■□□□□ 0.89
VRK3-225ENST00000601912 SNAP25P60880 206 aa20.58■□□□□ 0.89
VRK3-225ENST00000601912 MAP1SQ66K74 1059 aaPredicted RBP20.58■□□□□ 0.89
VRK3-225ENST00000601912 LDHDQ86WU2 507 aa20.58■□□□□ 0.89
VRK3-225ENST00000601912 RASGRP4Q8TDF6 673 aa20.58■□□□□ 0.89
VRK3-225ENST00000601912 C12orf42Q96LP6 360 aa20.58■□□□□ 0.89
VRK3-225ENST00000601912 SLF1Q9BQI6 1058 aa20.58■□□□□ 0.89
VRK3-225ENST00000601912 RANBP17Q9H2T7 1088 aaKnown RBP20.58■□□□□ 0.89
VRK3-225ENST00000601912 PSTPIP2Q9H939 334 aa20.58■□□□□ 0.89
VRK3-225ENST00000601912 FAM205CA6NFA0 338 aa20.58■□□□□ 0.88
VRK3-225ENST00000601912 PPP6R2O75170 966 aa20.58■□□□□ 0.88
VRK3-225ENST00000601912 BMP15O95972 392 aa20.58■□□□□ 0.88
VRK3-225ENST00000601912 POTEIP0CG38 1075 aa20.58■□□□□ 0.88
VRK3-225ENST00000601912 POTEJP0CG39 1038 aa20.58■□□□□ 0.88
VRK3-225ENST00000601912 HMGCS2P54868 508 aa20.58■□□□□ 0.88
VRK3-225ENST00000601912 SAMD1Q6SPF0 538 aaPredicted RBP20.58■□□□□ 0.88
VRK3-225ENST00000601912 SYAP1Q96A49 352 aaPredicted RBP20.58■□□□□ 0.88
VRK3-225ENST00000601912 PGBD1Q96JS3 809 aa20.58■□□□□ 0.88
VRK3-225ENST00000601912 RPAP3Q9H6T3 665 aaPredicted RBP20.58■□□□□ 0.88
VRK3-225ENST00000601912 ADAMTS3O15072 1205 aa20.57■□□□□ 0.88
VRK3-225ENST00000601912 PTPAQ15257 358 aa20.57■□□□□ 0.88
VRK3-225ENST00000601912 TTC38Q5R3I4 469 aa20.57■□□□□ 0.88
VRK3-225ENST00000601912 CAVIN1Q6NZI2 390 aaKnown RBP20.57■□□□□ 0.88
VRK3-225ENST00000601912 EIF4ENIF1Q9NRA8 985 aaKnown RBP20.57■□□□□ 0.88
VRK3-225ENST00000601912 FBXO28Q9NVF7 368 aa20.57■□□□□ 0.88
VRK3-225ENST00000601912 ZBTB4Q9P1Z0 1013 aaPredicted RBP20.57■□□□□ 0.88
VRK3-225ENST00000601912 PCDHB6Q9Y5E3 794 aa20.57■□□□□ 0.88
VRK3-225ENST00000601912 FLOT1O75955 427 aa20.56■□□□□ 0.88
VRK3-225ENST00000601912 PPATQ06203 517 aa20.56■□□□□ 0.88
VRK3-225ENST00000601912 DGKZQ13574 1117 aa20.56■□□□□ 0.88
VRK3-225ENST00000601912 NONOQ15233 471 aaKnown RBP eCLIP20.56■□□□□ 0.88
VRK3-225ENST00000601912 USH1GQ495M9 461 aa20.56■□□□□ 0.88
VRK3-225ENST00000601912 NOM1Q5C9Z4 860 aaKnown RBP20.56■□□□□ 0.88
VRK3-225ENST00000601912 ADALQ6DHV7 355 aa20.56■□□□□ 0.88
VRK3-225ENST00000601912 ERO1BQ86YB8 467 aa20.56■□□□□ 0.88
VRK3-225ENST00000601912 GZF1Q9H116 711 aaPredicted RBP20.56■□□□□ 0.88
VRK3-225ENST00000601912 BIN2Q9UBW5 565 aaPredicted RBP20.56■□□□□ 0.88
VRK3-225ENST00000601912 PCDHA7Q9UN72 937 aa20.56■□□□□ 0.88
VRK3-225ENST00000601912 CCDC174Q6PII3 467 aa20.55■□□□□ 0.88
VRK3-225ENST00000601912 ELP3Q9H9T3 547 aa20.55■□□□□ 0.88
VRK3-225ENST00000601912 PHIPQ8WWQ0 1821 aa20.55■□□□□ 0.88
VRK3-225ENST00000601912 FDX1P10109 184 aa20.54■□□□□ 0.88
VRK3-225ENST00000601912 MARCKSP29966 332 aaPredicted RBP20.54■□□□□ 0.88
VRK3-225ENST00000601912 SH3D19Q5HYK7 790 aa20.54■□□□□ 0.88
VRK3-225ENST00000601912 JAKMIP3Q5VZ66 844 aa20.54■□□□□ 0.88
VRK3-225ENST00000601912 MCTP2Q6DN12 878 aa20.54■□□□□ 0.88
VRK3-225ENST00000601912 MOB2Q70IA6 237 aa20.54■□□□□ 0.88
VRK3-225ENST00000601912 PPP1R9AQ9ULJ8 1098 aa20.54■□□□□ 0.88
VRK3-225ENST00000601912 CTDP1Q9Y5B0 961 aaPredicted RBP20.54■□□□□ 0.88
VRK3-225ENST00000601912 A0A1W2PQ27 194 aa20.54■□□□□ 0.88
VRK3-225ENST00000601912 A0A1W2PQ64 194 aa20.54■□□□□ 0.88
VRK3-225ENST00000601912 A0A1W2PQD8 194 aa20.54■□□□□ 0.88
VRK3-225ENST00000601912 UNCXA6NJT0 531 aa20.54■□□□□ 0.88
VRK3-225ENST00000601912 INF2Q27J81 1249 aa20.54■□□□□ 0.88
VRK3-225ENST00000601912 TEX2Q8IWB9 1127 aa20.54■□□□□ 0.88
VRK3-225ENST00000601912 ZNF408Q9H9D4 720 aa20.54■□□□□ 0.88
VRK3-225ENST00000601912 PNMA2Q9UL42 364 aa20.54■□□□□ 0.88
VRK3-225ENST00000601912 MORC2Q9Y6X9 1032 aaPredicted RBP20.54■□□□□ 0.88
VRK3-225ENST00000601912 PAPPA2Q9BXP8 1791 aa20.53■□□□□ 0.88
VRK3-225ENST00000601912 SPDYE5A6NIY4 337 aa20.53■□□□□ 0.88
VRK3-225ENST00000601912 TRAF5O00463 557 aa20.53■□□□□ 0.88
VRK3-225ENST00000601912 ZNF174Q15697 407 aa20.53■□□□□ 0.88
VRK3-225ENST00000601912 CCAR1Q8IX12 1150 aaKnown RBP20.53■□□□□ 0.88
VRK3-225ENST00000601912 KRI1Q8N9T8 703 aaKnown RBP20.53■□□□□ 0.88
VRK3-225ENST00000601912 NMRK2Q9NPI5 230 aa20.53■□□□□ 0.88
VRK3-225ENST00000601912 MRPL11Q9Y3B7 192 aaKnown RBP20.53■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms