RNA–Protein interactions for RNA: ENST00000601801.2

NEAT1-203, nuclear paraspeckle assembly transcript 1, humanhuman

TSL 4 BASIC

Gene NEAT1, Length 487 nt, Biotype lincRNA, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEAT1-203ENST00000601801 FOXP2O15409 715 aa16.9■□□□□ 0.3
NEAT1-203ENST00000601801 ZNF865P0CJ78 1059 aaPredicted RBP16.9■□□□□ 0.3
NEAT1-203ENST00000601801 AKR1A1P14550 325 aa16.9■□□□□ 0.3
NEAT1-203ENST00000601801 TAL1P17542 331 aaPredicted RBP16.9■□□□□ 0.3
NEAT1-203ENST00000601801 SLC1A4P43007 532 aa16.9■□□□□ 0.3
NEAT1-203ENST00000601801 STAT2P52630 851 aa16.9■□□□□ 0.3
NEAT1-203ENST00000601801 IKQ13123 557 aaPredicted RBP16.9■□□□□ 0.3
NEAT1-203ENST00000601801 TICAM2Q86XR7 235 aa16.9■□□□□ 0.3
NEAT1-203ENST00000601801 ANKRD35Q8N283 1001 aa16.9■□□□□ 0.3
NEAT1-203ENST00000601801 CHST13Q8NET6 341 aa16.9■□□□□ 0.3
NEAT1-203ENST00000601801 CHURC1Q8WUH1 139 aa16.9■□□□□ 0.3
NEAT1-203ENST00000601801 SYMPKQ92797 1274 aaKnown RBP16.9■□□□□ 0.3
NEAT1-203ENST00000601801 BADQ92934 168 aa16.9■□□□□ 0.3
NEAT1-203ENST00000601801 FERMT2Q96AC1 680 aa16.9■□□□□ 0.3
NEAT1-203ENST00000601801 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.9■□□□□ 0.31e-323■□□□□ 10.2
NEAT1-203ENST00000601801 SYNGAP1Q96PV0 1343 aa16.9■□□□□ 0.3
NEAT1-203ENST00000601801 IGHDP01880 384 aa16.89■□□□□ 0.29
NEAT1-203ENST00000601801 VPS53Q5VIR6 699 aa16.89■□□□□ 0.29
NEAT1-203ENST00000601801 MAMDC4Q6UXC1 1216 aa16.89■□□□□ 0.29
NEAT1-203ENST00000601801 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.89■□□□□ 0.291e-323■□□□□ 8.4
NEAT1-203ENST00000601801 ZNF467Q7Z7K2 595 aaPredicted RBP16.89■□□□□ 0.29
NEAT1-203ENST00000601801 FAM160B2Q86V87 743 aa16.89■□□□□ 0.29
NEAT1-203ENST00000601801 PRDM5Q9NQX1 630 aaPredicted RBP16.89■□□□□ 0.29
NEAT1-203ENST00000601801 PDLIM7Q9NR12 457 aa16.89■□□□□ 0.29
NEAT1-203ENST00000601801 ANAPC4Q9UJX5 808 aa16.89■□□□□ 0.29
NEAT1-203ENST00000601801 RANBP6O60518 1105 aaKnown RBP16.88■□□□□ 0.29
NEAT1-203ENST00000601801 PGK1P00558 417 aa16.88■□□□□ 0.29
NEAT1-203ENST00000601801 FOSL2P15408 326 aa16.88■□□□□ 0.29
NEAT1-203ENST00000601801 MCCP23508 829 aa16.88■□□□□ 0.29
NEAT1-203ENST00000601801 ALX1Q15699 326 aa16.88■□□□□ 0.29
NEAT1-203ENST00000601801 TRIM60Q495X7 471 aa16.88■□□□□ 0.29
NEAT1-203ENST00000601801 MCMDC2Q4G0Z9 681 aa16.88■□□□□ 0.29
NEAT1-203ENST00000601801 C1orf53Q5VUE5 145 aa16.88■□□□□ 0.29
NEAT1-203ENST00000601801 STAG1Q8WVM7 1258 aa16.88■□□□□ 0.29
NEAT1-203ENST00000601801 LNPKQ9C0E8 428 aa16.88■□□□□ 0.29
NEAT1-203ENST00000601801 INCENPQ9NQS7 918 aa16.88■□□□□ 0.29
NEAT1-203ENST00000601801 IL17RBQ9NRM6 502 aa16.88■□□□□ 0.29
NEAT1-203ENST00000601801 HOMER2Q9NSB8 354 aa16.88■□□□□ 0.29
NEAT1-203ENST00000601801 ZHX1Q9UKY1 873 aaPredicted RBP16.88■□□□□ 0.29
NEAT1-203ENST00000601801 FAM184BQ9ULE4 1060 aa16.88■□□□□ 0.29
NEAT1-203ENST00000601801 PHF24Q9UPV7 400 aa16.88■□□□□ 0.29
NEAT1-203ENST00000601801 TTC28Q96AY4 2481 aa16.87■□□□□ 0.29
NEAT1-203ENST00000601801 TMEM265A0A087WTH1 108 aa16.87■□□□□ 0.29
NEAT1-203ENST00000601801 TRIM43BA6NCK2 446 aa16.87■□□□□ 0.29
NEAT1-203ENST00000601801 TRIM6-TRIM34B2RNG4 842 aa16.87■□□□□ 0.29
NEAT1-203ENST00000601801 NMT2O60551 498 aa16.87■□□□□ 0.29
NEAT1-203ENST00000601801 PLA2G6O60733 806 aa16.87■□□□□ 0.29
NEAT1-203ENST00000601801 SNAI1O95863 264 aaPredicted RBP16.87■□□□□ 0.29
NEAT1-203ENST00000601801 RCSD1Q6JBY9 416 aa16.87■□□□□ 0.29
NEAT1-203ENST00000601801 TRIM43Q96BQ3 446 aaPredicted RBP16.87■□□□□ 0.29
NEAT1-203ENST00000601801 CHMP4CQ96CF2 233 aa16.87■□□□□ 0.29
NEAT1-203ENST00000601801 FAM227BQ96M60 508 aa16.87■□□□□ 0.29
NEAT1-203ENST00000601801 TOMM22Q9NS69 142 aa16.87■□□□□ 0.29
NEAT1-203ENST00000601801 A0A0D9SFI3 127 aa16.86■□□□□ 0.29
NEAT1-203ENST00000601801 ORC4O43929 436 aa16.86■□□□□ 0.29
NEAT1-203ENST00000601801 FGAP02671 866 aa16.86■□□□□ 0.29
NEAT1-203ENST00000601801 KCTD1Q719H9 257 aa16.86■□□□□ 0.29
NEAT1-203ENST00000601801 SH3RF1Q7Z6J0 888 aa16.86■□□□□ 0.29
NEAT1-203ENST00000601801 RILPL2Q969X0 211 aa16.86■□□□□ 0.29
NEAT1-203ENST00000601801 LENG1Q96BZ8 264 aaPredicted RBP16.86■□□□□ 0.29
NEAT1-203ENST00000601801 ACAD9Q9H845 621 aa16.86■□□□□ 0.29
NEAT1-203ENST00000601801 CDKN2AIPQ9NXV6 580 aaPredicted RBP16.86■□□□□ 0.29
NEAT1-203ENST00000601801 A0A1W2PQ45 241 aaPredicted RBP16.85■□□□□ 0.29
NEAT1-203ENST00000601801 A0A1W2PQY0 241 aa16.85■□□□□ 0.29
NEAT1-203ENST00000601801 ADAMTS4O75173 837 aa16.85■□□□□ 0.29
NEAT1-203ENST00000601801 FGRP09769 529 aa16.85■□□□□ 0.29
NEAT1-203ENST00000601801 ACVR2BQ13705 512 aa16.85■□□□□ 0.29
NEAT1-203ENST00000601801 TKFCQ3LXA3 575 aa16.85■□□□□ 0.29
NEAT1-203ENST00000601801 RRP12Q5JTH9 1297 aaKnown RBP16.85■□□□□ 0.29
NEAT1-203ENST00000601801 SMC5Q8IY18 1101 aa16.85■□□□□ 0.29
NEAT1-203ENST00000601801 AGBL1Q96MI9 1066 aa16.85■□□□□ 0.29
NEAT1-203ENST00000601801 TSEN34Q9BSV6 310 aaKnown RBP16.85■□□□□ 0.29
NEAT1-203ENST00000601801 ABHD16BQ9H3Z7 469 aa16.85■□□□□ 0.29
NEAT1-203ENST00000601801 MTMR7Q9Y216 660 aa16.85■□□□□ 0.29
NEAT1-203ENST00000601801 DUSP11O75319 330 aaKnown RBP16.84■□□□□ 0.29
NEAT1-203ENST00000601801 HSPD1P10809 573 aaKnown RBP16.84■□□□□ 0.29
NEAT1-203ENST00000601801 MFAP1P55081 439 aaKnown RBP16.84■□□□□ 0.29
NEAT1-203ENST00000601801 TLE2Q04725 743 aa16.84■□□□□ 0.29
NEAT1-203ENST00000601801 NMIQ13287 307 aaPredicted RBP16.84■□□□□ 0.29
NEAT1-203ENST00000601801 ARMCX2Q7L311 632 aa16.84■□□□□ 0.29
NEAT1-203ENST00000601801 NUP133Q8WUM0 1156 aa16.84■□□□□ 0.29
NEAT1-203ENST00000601801 TRERF1Q96PN7 1200 aa16.84■□□□□ 0.29
NEAT1-203ENST00000601801 RNF146Q9NTX7 359 aa16.84■□□□□ 0.29
NEAT1-203ENST00000601801 PRR12Q9ULL5 1215 aa16.84■□□□□ 0.29
NEAT1-203ENST00000601801 TACC3Q9Y6A5 838 aa16.84■□□□□ 0.29
NEAT1-203ENST00000601801 ZNF536O15090 1300 aa16.84■□□□□ 0.29
NEAT1-203ENST00000601801 ZMYM6O95789 1325 aa16.84■□□□□ 0.29
NEAT1-203ENST00000601801 SYNRGQ9UMZ2 1314 aa16.84■□□□□ 0.29
NEAT1-203ENST00000601801 MCM3APO60318 1980 aa16.84■□□□□ 0.29
NEAT1-203ENST00000601801 ALAS1P13196 640 aa16.83■□□□□ 0.28
NEAT1-203ENST00000601801 NOVP48745 357 aa16.83■□□□□ 0.28
NEAT1-203ENST00000601801 ACLYP53396 1101 aa16.83■□□□□ 0.28
NEAT1-203ENST00000601801 CNTN2Q02246 1040 aa16.83■□□□□ 0.28
NEAT1-203ENST00000601801 MUC3AQ02505 3323 aa16.83■□□□□ 0.28
NEAT1-203ENST00000601801 CCDC96Q2M329 555 aa16.83■□□□□ 0.28
NEAT1-203ENST00000601801 CCDC174Q6PII3 467 aa16.83■□□□□ 0.28
NEAT1-203ENST00000601801 CCDC171Q6TFL3 1326 aa16.83■□□□□ 0.28
NEAT1-203ENST00000601801 ZNF589Q86UQ0 364 aaPredicted RBP16.83■□□□□ 0.28
NEAT1-203ENST00000601801 CHD1LQ86WJ1 897 aa16.83■□□□□ 0.28
NEAT1-203ENST00000601801 CCDC144CPQ8IYA2 1237 aa16.83■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 135.5 ms