RNA–Protein interactions for RNA: ENST00000601065.5

SNRNP70-209, Transcript of small nuclear ribonucleoprotein U1 subunit 70, humanhuman

TSL 3

Gene SNRNP70, Length 1,757 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP70-209ENST00000601065 HOXA7P31268 230 aaPredicted RBP25.41■■□□□ 1.66
SNRNP70-209ENST00000601065 RGMBQ6NW40 437 aa25.41■■□□□ 1.66
SNRNP70-209ENST00000601065 RASAL3Q86YV0 1011 aa25.41■■□□□ 1.66
SNRNP70-209ENST00000601065 PHF20Q9BVI0 1012 aa25.41■■□□□ 1.66
SNRNP70-209ENST00000601065 MMP1P03956 469 aa25.41■■□□□ 1.66
SNRNP70-209ENST00000601065 COG2Q14746 738 aa25.41■■□□□ 1.66
SNRNP70-209ENST00000601065 FAM177A1Q8N128 213 aaPredicted RBP25.4■■□□□ 1.66
SNRNP70-209ENST00000601065 COA7Q96BR5 231 aa25.4■■□□□ 1.66
SNRNP70-209ENST00000601065 ABT1Q9ULW3 272 aaKnown RBP25.4■■□□□ 1.66
SNRNP70-209ENST00000601065 CETPP11597 493 aa25.39■■□□□ 1.66
SNRNP70-209ENST00000601065 DSG3P32926 999 aa25.39■■□□□ 1.66
SNRNP70-209ENST00000601065 NAPAP54920 295 aa25.39■■□□□ 1.66
SNRNP70-209ENST00000601065 GPAT2Q6NUI2 795 aa25.39■■□□□ 1.66
SNRNP70-209ENST00000601065 FERMT3Q86UX7 667 aa25.39■■□□□ 1.66
SNRNP70-209ENST00000601065 CCDC148Q8NFR7 591 aa25.39■■□□□ 1.66
SNRNP70-209ENST00000601065 AMNQ9BXJ7 453 aa25.39■■□□□ 1.66
SNRNP70-209ENST00000601065 SLC38A10Q9HBR0 1119 aa25.39■■□□□ 1.66
SNRNP70-209ENST00000601065 ADAMTS5Q9UNA0 930 aa25.39■■□□□ 1.66
SNRNP70-209ENST00000601065 MYPNQ86TC9 1320 aa25.39■■□□□ 1.65
SNRNP70-209ENST00000601065 NFKBIBQ15653 356 aa25.39■■□□□ 1.65
SNRNP70-209ENST00000601065 FBXO11Q86XK2 927 aa25.39■■□□□ 1.65
SNRNP70-209ENST00000601065 CCDC12Q8WUD4 166 aaPredicted RBP25.39■■□□□ 1.65
SNRNP70-209ENST00000601065 ATG4CQ96DT6 458 aa25.39■■□□□ 1.65
SNRNP70-209ENST00000601065 HOXC10Q9NYD6 342 aa25.39■■□□□ 1.65
SNRNP70-209ENST00000601065 VWA5AO00534 786 aa25.38■■□□□ 1.65
SNRNP70-209ENST00000601065 FDX1P10109 184 aa25.38■■□□□ 1.65
SNRNP70-209ENST00000601065 NPY5RQ15761 445 aa25.38■■□□□ 1.65
SNRNP70-209ENST00000601065 MCTP1Q6DN14 999 aa25.38■■□□□ 1.65
SNRNP70-209ENST00000601065 CCDC174Q6PII3 467 aa25.38■■□□□ 1.65
SNRNP70-209ENST00000601065 GBP4Q96PP9 640 aa25.38■■□□□ 1.65
SNRNP70-209ENST00000601065 PCDHA1Q9Y5I3 950 aa25.38■■□□□ 1.65
SNRNP70-209ENST00000601065 CCL15-CCL14A0A0B4J2E2 113 aa25.37■■□□□ 1.65
SNRNP70-209ENST00000601065 SPDYE16A6NNV3 312 aaPredicted RBP25.37■■□□□ 1.65
SNRNP70-209ENST00000601065 BAG4O95429 457 aaKnown RBP25.37■■□□□ 1.65
SNRNP70-209ENST00000601065 NLRP5P59047 1200 aa25.37■■□□□ 1.65
SNRNP70-209ENST00000601065 KIF23Q02241 960 aaPredicted RBP25.37■■□□□ 1.65
SNRNP70-209ENST00000601065 CCL15Q16663 113 aa25.37■■□□□ 1.65
SNRNP70-209ENST00000601065 FOXD4L6Q3SYB3 417 aaPredicted RBP25.37■■□□□ 1.65
SNRNP70-209ENST00000601065 PPP1R18Q6NYC8 613 aa25.37■■□□□ 1.65
SNRNP70-209ENST00000601065 FOXD4L3Q6VB84 417 aaPredicted RBP25.37■■□□□ 1.65
SNRNP70-209ENST00000601065 CLEC17AQ6ZS10 378 aa25.37■■□□□ 1.65
SNRNP70-209ENST00000601065 HHIPL1Q96JK4 782 aa25.37■■□□□ 1.65
SNRNP70-209ENST00000601065 ZMYND12Q9H0C1 365 aa25.37■■□□□ 1.65
SNRNP70-209ENST00000601065 ZNF536O15090 1300 aa25.37■■□□□ 1.65
SNRNP70-209ENST00000601065 SLC10A3P09131 477 aa25.36■■□□□ 1.65
SNRNP70-209ENST00000601065 SAFBQ15424 915 aaKnown RBP eCLIP25.36■■□□□ 1.65
SNRNP70-209ENST00000601065 DIS3L2Q8IYB7 885 aaKnown RBP25.36■■□□□ 1.65
SNRNP70-209ENST00000601065 BRI3BPQ8WY22 251 aa25.36■■□□□ 1.65
SNRNP70-209ENST00000601065 CHAMP1Q96JM3 812 aa25.36■■□□□ 1.65
SNRNP70-209ENST00000601065 CALML3P27482 149 aa25.36■■□□□ 1.65
SNRNP70-209ENST00000601065 IRX3P78415 501 aaPredicted RBP25.36■■□□□ 1.65
SNRNP70-209ENST00000601065 RESTQ13127 1097 aa25.36■■□□□ 1.65
SNRNP70-209ENST00000601065 PABPC4Q13310 644 aaKnown RBP eCLIP25.36■■□□□ 1.654e-9■■■□□ 19.1
SNRNP70-209ENST00000601065 USH1GQ495M9 461 aa25.36■■□□□ 1.65
SNRNP70-209ENST00000601065 ASCC2Q9H1I8 757 aaPredicted RBP25.36■■□□□ 1.65
SNRNP70-209ENST00000601065 COL11A1P12107 1806 aaPredicted RBP25.35■■□□□ 1.65
SNRNP70-209ENST00000601065 SMCHD1A6NHR9 2005 aa25.35■■□□□ 1.65
SNRNP70-209ENST00000601065 ESYT2A0FGR8 921 aa25.35■■□□□ 1.65
SNRNP70-209ENST00000601065 BTBD18B2RXH4 712 aa25.35■■□□□ 1.65
SNRNP70-209ENST00000601065 KIF28PB7ZC32 967 aa25.35■■□□□ 1.65
SNRNP70-209ENST00000601065 ZBED4O75132 1171 aa25.35■■□□□ 1.65
SNRNP70-209ENST00000601065 ICAM1P05362 532 aa25.35■■□□□ 1.65
SNRNP70-209ENST00000601065 ZSCAN16Q9H4T2 348 aaPredicted RBP25.35■■□□□ 1.65
SNRNP70-209ENST00000601065 SMCO2A6NFE2 343 aa25.34■■□□□ 1.65
SNRNP70-209ENST00000601065 U2AF2P26368 475 aaKnown RBP eCLIP25.34■■□□□ 1.65
SNRNP70-209ENST00000601065 KRT2P35908 639 aa25.34■■□□□ 1.65
SNRNP70-209ENST00000601065 TRAF1Q13077 416 aa25.34■■□□□ 1.65
SNRNP70-209ENST00000601065 GALNT17Q6IS24 598 aa25.34■■□□□ 1.65
SNRNP70-209ENST00000601065 REPS2Q8NFH8 660 aa25.34■■□□□ 1.65
SNRNP70-209ENST00000601065 OXER1Q8TDS5 423 aa25.34■■□□□ 1.65
SNRNP70-209ENST00000601065 PCDHA4Q9UN74 947 aa25.34■■□□□ 1.65
SNRNP70-209ENST00000601065 ATP6V1DQ9Y5K8 247 aa25.34■■□□□ 1.65
SNRNP70-209ENST00000601065 FAM155AB1AL88 458 aaPredicted RBP25.33■■□□□ 1.65
SNRNP70-209ENST00000601065 BTBD19C9JJ37 291 aa25.33■■□□□ 1.65
SNRNP70-209ENST00000601065 TAL1P17542 331 aaPredicted RBP25.33■■□□□ 1.65
SNRNP70-209ENST00000601065 DAGLBQ8NCG7 672 aa25.33■■□□□ 1.65
SNRNP70-209ENST00000601065 CCDC102AQ96A19 550 aa25.33■■□□□ 1.65
SNRNP70-209ENST00000601065 P2RX7Q99572 595 aaKnown RBP25.33■■□□□ 1.65
SNRNP70-209ENST00000601065 FOXP1Q9H334 677 aaPredicted RBP25.33■■□□□ 1.65
SNRNP70-209ENST00000601065 BRMS1Q9HCU9 246 aa25.33■■□□□ 1.65
SNRNP70-209ENST00000601065 C6orf50Q9HD87 102 aa25.33■■□□□ 1.65
SNRNP70-209ENST00000601065 CTDP1Q9Y5B0 961 aaPredicted RBP25.33■■□□□ 1.65
SNRNP70-209ENST00000601065 TCHHQ07283 1943 aa25.33■■□□□ 1.65
SNRNP70-209ENST00000601065 A0A0G2JMZ2 1700 aa25.33■■□□□ 1.65
SNRNP70-209ENST00000601065 TESPA1A2RU30 521 aaPredicted RBP25.33■■□□□ 1.65
SNRNP70-209ENST00000601065 OSBPP22059 807 aa25.33■■□□□ 1.65
SNRNP70-209ENST00000601065 GNA11P29992 359 aa25.33■■□□□ 1.65
SNRNP70-209ENST00000601065 MCM4P33991 863 aa25.33■■□□□ 1.65
SNRNP70-209ENST00000601065 NR5A1Q13285 461 aa25.33■■□□□ 1.65
SNRNP70-209ENST00000601065 ANKRD23Q86SG2 305 aa25.33■■□□□ 1.65
SNRNP70-209ENST00000601065 CPXCR1Q8N123 301 aa25.33■■□□□ 1.65
SNRNP70-209ENST00000601065 AGBL1Q96MI9 1066 aa25.33■■□□□ 1.65
SNRNP70-209ENST00000601065 RAVER2Q9HCJ3 691 aaKnown RBP25.33■■□□□ 1.65
SNRNP70-209ENST00000601065 SLC45A1Q9Y2W3 748 aa25.33■■□□□ 1.65
SNRNP70-209ENST00000601065 ADAMTS3O15072 1205 aa25.32■■□□□ 1.64
SNRNP70-209ENST00000601065 APLP1P51693 650 aa25.32■■□□□ 1.64
SNRNP70-209ENST00000601065 GNL2Q13823 731 aaKnown RBP25.32■■□□□ 1.64
SNRNP70-209ENST00000601065 POTEEQ6S8J3 1075 aa25.32■■□□□ 1.64
SNRNP70-209ENST00000601065 LBX2Q6XYB7 198 aa25.32■■□□□ 1.64
SNRNP70-209ENST00000601065 BLIDQ8IZY5 108 aa25.32■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms