RNA–Protein interactions for RNA: ENST00000589788.1

SDF2-208, Transcript of stromal cell derived factor 2, humanhuman

TSL 2

Gene SDF2, Length 1,342 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-208ENST00000589788 CCNA1P78396 465 aa12.25□□□□□ -0.45
SDF2-208ENST00000589788 PRKCZQ05513 592 aa12.25□□□□□ -0.45
SDF2-208ENST00000589788 AKNAD1Q5T1N1 836 aa12.25□□□□□ -0.45
SDF2-208ENST00000589788 PPP2R2DQ66LE6 453 aa12.25□□□□□ -0.45
SDF2-208ENST00000589788 MFSD6Q6ZSS7 791 aa12.25□□□□□ -0.45
SDF2-208ENST00000589788 HS3ST6Q96QI5 342 aa12.25□□□□□ -0.45
SDF2-208ENST00000589788 RNF41Q9H4P4 317 aaPredicted RBP12.25□□□□□ -0.45
SDF2-208ENST00000589788 LAMA4Q16363 1823 aa12.24□□□□□ -0.45
SDF2-208ENST00000589788 F5H6K3 240 aa12.24□□□□□ -0.45
SDF2-208ENST00000589788 NDUFV2P19404 249 aa12.24□□□□□ -0.45
SDF2-208ENST00000589788 MAPK4P31152 587 aa12.24□□□□□ -0.45
SDF2-208ENST00000589788 GCGRP47871 477 aa12.24□□□□□ -0.45
SDF2-208ENST00000589788 KLRC3Q07444 240 aa12.24□□□□□ -0.45
SDF2-208ENST00000589788 IMMTQ16891 758 aaKnown RBP12.24□□□□□ -0.45
SDF2-208ENST00000589788 LBX2Q6XYB7 198 aa12.24□□□□□ -0.45
SDF2-208ENST00000589788 ARMC5Q96C12 935 aa12.24□□□□□ -0.45
SDF2-208ENST00000589788 SYNPO2Q9UMS6 1093 aa12.24□□□□□ -0.45
SDF2-208ENST00000589788 GABRQQ9UN88 632 aa12.24□□□□□ -0.45
SDF2-208ENST00000589788 STX8Q9UNK0 236 aa12.24□□□□□ -0.45
SDF2-208ENST00000589788 DOCK3Q8IZD9 2030 aa12.24□□□□□ -0.45
SDF2-208ENST00000589788 BHMG1C9JSJ3 638 aaPredicted RBP12.23□□□□□ -0.45
SDF2-208ENST00000589788 NDUFB10O96000 172 aa12.23□□□□□ -0.45
SDF2-208ENST00000589788 FGRP09769 529 aa12.23□□□□□ -0.45
SDF2-208ENST00000589788 GRK4P32298 578 aa12.23□□□□□ -0.45
SDF2-208ENST00000589788 FLT3LGP49771 235 aa12.23□□□□□ -0.45
SDF2-208ENST00000589788 SOX10P56693 466 aa12.23□□□□□ -0.45
SDF2-208ENST00000589788 Q3C1V9 767 aa12.23□□□□□ -0.45
SDF2-208ENST00000589788 FAM83BQ5T0W9 1011 aa12.23□□□□□ -0.45
SDF2-208ENST00000589788 WDR78Q5VTH9 848 aa12.23□□□□□ -0.45
SDF2-208ENST00000589788 SKAP1Q86WV1 359 aa12.23□□□□□ -0.45
SDF2-208ENST00000589788 LRRC47Q8N1G4 583 aaKnown RBP12.23□□□□□ -0.45
SDF2-208ENST00000589788 MB21D1Q8N884 522 aa12.23□□□□□ -0.45
SDF2-208ENST00000589788 SH3TC2Q8TF17 1288 aa12.23□□□□□ -0.45
SDF2-208ENST00000589788 STAG1Q8WVM7 1258 aa12.23□□□□□ -0.45
SDF2-208ENST00000589788 MKL1Q969V6 931 aa12.23□□□□□ -0.45
SDF2-208ENST00000589788 NUP88Q99567 741 aaPredicted RBP12.23□□□□□ -0.45
SDF2-208ENST00000589788 IL25Q9H293 177 aa12.23□□□□□ -0.45
SDF2-208ENST00000589788 BIN2Q9UBW5 565 aaPredicted RBP12.23□□□□□ -0.45
SDF2-208ENST00000589788 ISY1Q9ULR0 285 aaKnown RBP12.23□□□□□ -0.45
SDF2-208ENST00000589788 TACC3Q9Y6A5 838 aa12.23□□□□□ -0.45
SDF2-208ENST00000589788 PARP14Q460N5 1801 aa12.22□□□□□ -0.45
SDF2-208ENST00000589788 ADCY3O60266 1144 aa12.22□□□□□ -0.45
SDF2-208ENST00000589788 NMT2O60551 498 aa12.22□□□□□ -0.45
SDF2-208ENST00000589788 KDM4AO75164 1064 aa12.22□□□□□ -0.45
SDF2-208ENST00000589788 CNMDO75829 334 aa12.22□□□□□ -0.45
SDF2-208ENST00000589788 IRF5Q13568 498 aa12.22□□□□□ -0.45
SDF2-208ENST00000589788 PLS1Q14651 629 aa12.22□□□□□ -0.45
SDF2-208ENST00000589788 QPCTQ16769 361 aa12.22□□□□□ -0.45
SDF2-208ENST00000589788 PLEKHH3Q7Z736 793 aa12.22□□□□□ -0.45
SDF2-208ENST00000589788 TBC1D10CQ8IV04 446 aa12.22□□□□□ -0.45
SDF2-208ENST00000589788 GMCL1P1Q8NEA9 526 aa12.22□□□□□ -0.45
SDF2-208ENST00000589788 ESR2Q92731 530 aa12.22□□□□□ -0.45
SDF2-208ENST00000589788 ATG4CQ96DT6 458 aa12.22□□□□□ -0.45
SDF2-208ENST00000589788 NBPF3Q9H094 633 aa12.22□□□□□ -0.45
SDF2-208ENST00000589788 PORCNQ9H237 461 aa12.22□□□□□ -0.45
SDF2-208ENST00000589788 FBXO28Q9NVF7 368 aa12.22□□□□□ -0.45
SDF2-208ENST00000589788 BTBD7Q9P203 1132 aa12.22□□□□□ -0.45
SDF2-208ENST00000589788 IVNS1ABPQ9Y6Y0 642 aa12.22□□□□□ -0.45
SDF2-208ENST00000589788 RLFQ13129 1914 aa12.22□□□□□ -0.45
SDF2-208ENST00000589788 SGSM2O43147 1006 aa12.21□□□□□ -0.45
SDF2-208ENST00000589788 HOXA2O43364 376 aa12.21□□□□□ -0.45
SDF2-208ENST00000589788 MYCP01106 439 aaPredicted RBP12.21□□□□□ -0.45
SDF2-208ENST00000589788 BMP2KLQ5H9B9 411 aa12.21□□□□□ -0.45
SDF2-208ENST00000589788 SLFN13Q68D06 897 aa12.21□□□□□ -0.45
SDF2-208ENST00000589788 KIAA1211Q6ZU35 1233 aa12.21□□□□□ -0.45
SDF2-208ENST00000589788 GPR142Q7Z601 462 aa12.21□□□□□ -0.45
SDF2-208ENST00000589788 SOCS4Q8WXH5 440 aa12.21□□□□□ -0.45
SDF2-208ENST00000589788 ZNF333Q96JL9 665 aa12.21□□□□□ -0.45
SDF2-208ENST00000589788 NUDT12Q9BQG2 462 aa12.21□□□□□ -0.45
SDF2-208ENST00000589788 SLF1Q9BQI6 1058 aa12.21□□□□□ -0.45
SDF2-208ENST00000589788 IL17RBQ9NRM6 502 aa12.21□□□□□ -0.45
SDF2-208ENST00000589788 PPP1R9AQ9ULJ8 1098 aa12.21□□□□□ -0.45
SDF2-208ENST00000589788 CTDP1Q9Y5B0 961 aaPredicted RBP12.21□□□□□ -0.45
SDF2-208ENST00000589788 A0A0G2JMZ2 1700 aa12.2□□□□□ -0.46
SDF2-208ENST00000589788 NEDD4P46934 1319 aa12.2□□□□□ -0.46
SDF2-208ENST00000589788 COL11A1P12107 1806 aaPredicted RBP12.2□□□□□ -0.46
SDF2-208ENST00000589788 BMP3P12645 472 aa12.2□□□□□ -0.46
SDF2-208ENST00000589788 ELNP15502 786 aa12.2□□□□□ -0.46
SDF2-208ENST00000589788 NT5C2P49902 561 aa12.2□□□□□ -0.46
SDF2-208ENST00000589788 UBXN2AP68543 259 aa12.2□□□□□ -0.46
SDF2-208ENST00000589788 CASC1Q6TDU7 716 aa12.2□□□□□ -0.46
SDF2-208ENST00000589788 LAPTM4BQ86VI4 370 aa12.2□□□□□ -0.46
SDF2-208ENST00000589788 PRPF38AQ8NAV1 312 aaKnown RBP12.2□□□□□ -0.46
SDF2-208ENST00000589788 CHMP4CQ96CF2 233 aa12.2□□□□□ -0.46
SDF2-208ENST00000589788 SPATC1LQ9H0A9 340 aa12.2□□□□□ -0.46
SDF2-208ENST00000589788 CNNM2Q9H8M5 875 aa12.2□□□□□ -0.46
SDF2-208ENST00000589788 GJD2Q9UKL4 321 aa12.2□□□□□ -0.46
SDF2-208ENST00000589788 B4E1Z4 1266 aa12.19□□□□□ -0.46
SDF2-208ENST00000589788 TK2O00142 265 aa12.19□□□□□ -0.46
SDF2-208ENST00000589788 VWA5AO00534 786 aa12.19□□□□□ -0.46
SDF2-208ENST00000589788 LILRB3O75022 631 aa12.19□□□□□ -0.46
SDF2-208ENST00000589788 TOP1P11387 765 aaKnown RBP12.19□□□□□ -0.46
SDF2-208ENST00000589788 CYP2B6P20813 491 aa12.19□□□□□ -0.46
SDF2-208ENST00000589788 MCCP23508 829 aa12.19□□□□□ -0.46
SDF2-208ENST00000589788 SLC1A4P43007 532 aa12.19□□□□□ -0.46
SDF2-208ENST00000589788 PTH1RQ03431 593 aa12.19□□□□□ -0.46
SDF2-208ENST00000589788 IKQ13123 557 aaPredicted RBP12.19□□□□□ -0.46
SDF2-208ENST00000589788 IQCA1Q86XH1 822 aa12.19□□□□□ -0.46
SDF2-208ENST00000589788 GMCL1Q96IK5 515 aa12.19□□□□□ -0.46
SDF2-208ENST00000589788 MOV10L1Q9BXT6 1211 aaKnown RBP12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms