RNA–Protein interactions for RNA: ENST00000586555.2

CIRBP-209, Transcript of cold inducible RNA binding protein, humanhuman

TSL 2

Gene CIRBP, Length 716 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-209ENST00000586555 ZMYND8Q9ULU4 1186 aaPredicted RBP24.22■■□□□ 1.47
CIRBP-209ENST00000586555 CYBAP13498 195 aa24.21■■□□□ 1.47
CIRBP-209ENST00000586555 PTH1RQ03431 593 aa24.21■■□□□ 1.47
CIRBP-209ENST00000586555 ZSCAN10Q96SZ4 725 aaPredicted RBP24.21■■□□□ 1.47
CIRBP-209ENST00000586555 UBAC1Q9BSL1 405 aa24.21■■□□□ 1.47
CIRBP-209ENST00000586555 KAT14Q9H8E8 782 aa24.21■■□□□ 1.47
CIRBP-209ENST00000586555 RAVER2Q9HCJ3 691 aaKnown RBP24.21■■□□□ 1.47
CIRBP-209ENST00000586555 ZSWIM5Q9P217 1185 aa24.21■■□□□ 1.47
CIRBP-209ENST00000586555 SMCHD1A6NHR9 2005 aa24.2■■□□□ 1.47
CIRBP-209ENST00000586555 CHST13Q8NET6 341 aa24.2■■□□□ 1.46
CIRBP-209ENST00000586555 DDX11Q96FC9 970 aa24.2■■□□□ 1.46
CIRBP-209ENST00000586555 LRRC26Q2I0M4 334 aa24.19■■□□□ 1.46
CIRBP-209ENST00000586555 MAP4K1Q92918 833 aa24.19■■□□□ 1.46
CIRBP-209ENST00000586555 DIS3Q9Y2L1 958 aaKnown RBP24.19■■□□□ 1.46
CIRBP-209ENST00000586555 CYP21A2P08686 494 aa24.18■■□□□ 1.46
CIRBP-209ENST00000586555 SYN1P17600 705 aa24.18■■□□□ 1.46
CIRBP-209ENST00000586555 CNGA1P29973 690 aa24.18■■□□□ 1.46
CIRBP-209ENST00000586555 ERICH6BQ5W0A0 696 aa24.18■■□□□ 1.46
CIRBP-209ENST00000586555 RALYLQ86SE5 291 aaKnown RBP24.18■■□□□ 1.46
CIRBP-209ENST00000586555 ANKS1AQ92625 1134 aa24.18■■□□□ 1.46
CIRBP-209ENST00000586555 ESYT1Q9BSJ8 1104 aa24.18■■□□□ 1.46
CIRBP-209ENST00000586555 PRR12Q9ULL5 1215 aa24.18■■□□□ 1.46
CIRBP-209ENST00000586555 DNAH12Q6ZR08 3092 aa24.17■■□□□ 1.46
CIRBP-209ENST00000586555 PDHBP11177 359 aa24.17■■□□□ 1.46
CIRBP-209ENST00000586555 TKFCQ3LXA3 575 aa24.17■■□□□ 1.46
CIRBP-209ENST00000586555 GPATCH4Q5T3I0 446 aaKnown RBP24.17■■□□□ 1.46
CIRBP-209ENST00000586555 BTNL9Q6UXG8 535 aa24.17■■□□□ 1.46
CIRBP-209ENST00000586555 PNMA1Q8ND90 353 aa24.17■■□□□ 1.46
CIRBP-209ENST00000586555 GPCPD1Q9NPB8 672 aa24.17■■□□□ 1.46
CIRBP-209ENST00000586555 PNMA2Q9UL42 364 aa24.17■■□□□ 1.46
CIRBP-209ENST00000586555 RIPK3Q9Y572 518 aa24.17■■□□□ 1.46
CIRBP-209ENST00000586555 TNKSO95271 1327 aa24.16■■□□□ 1.46
CIRBP-209ENST00000586555 ERICH2A1L162 156 aa24.16■■□□□ 1.46
CIRBP-209ENST00000586555 SOX1O00570 391 aaPredicted RBP24.16■■□□□ 1.46
CIRBP-209ENST00000586555 ANKRD35Q8N283 1001 aa24.16■■□□□ 1.46
CIRBP-209ENST00000586555 NCOA7Q8NI08 942 aa24.16■■□□□ 1.46
CIRBP-209ENST00000586555 MAML3Q96JK9 1138 aa24.16■■□□□ 1.46
CIRBP-209ENST00000586555 FRMPD2Q68DX3 1309 aaPredicted RBP24.15■■□□□ 1.46
CIRBP-209ENST00000586555 DNM1LO00429 736 aa24.15■■□□□ 1.46
CIRBP-209ENST00000586555 PGK2P07205 417 aa24.15■■□□□ 1.46
CIRBP-209ENST00000586555 MAGEA10P43363 369 aaPredicted RBP24.15■■□□□ 1.46
CIRBP-209ENST00000586555 ZNF543Q08ER8 600 aa24.15■■□□□ 1.46
CIRBP-209ENST00000586555 IFIT1BQ5T764 474 aaKnown RBP24.15■■□□□ 1.46
CIRBP-209ENST00000586555 SYDE2Q5VT97 1194 aa24.15■■□□□ 1.46
CIRBP-209ENST00000586555 ENAHQ8N8S7 591 aaPredicted RBP24.15■■□□□ 1.46
CIRBP-209ENST00000586555 RBM8AQ9Y5S9 174 aaKnown RBP24.15■■□□□ 1.46
CIRBP-209ENST00000586555 PLXNA1Q9UIW2 1896 aa24.15■■□□□ 1.46
CIRBP-209ENST00000586555 SEPT4O43236 478 aa24.14■■□□□ 1.45
CIRBP-209ENST00000586555 SNHG28P0DPA3 235 aa24.14■■□□□ 1.45
CIRBP-209ENST00000586555 SART3Q15020 963 aaKnown RBP24.14■■□□□ 1.45
CIRBP-209ENST00000586555 ZNF792Q3KQV3 632 aa24.14■■□□□ 1.45
CIRBP-209ENST00000586555 TTBK2Q6IQ55 1244 aa24.14■■□□□ 1.45
CIRBP-209ENST00000586555 CCDC174Q6PII3 467 aa24.14■■□□□ 1.45
CIRBP-209ENST00000586555 DHX30Q7L2E3 1194 aaKnown RBP eCLIP24.14■■□□□ 1.45
CIRBP-209ENST00000586555 SKAP1Q86WV1 359 aa24.14■■□□□ 1.45
CIRBP-209ENST00000586555 SENP6Q9GZR1 1112 aaPredicted RBP24.14■■□□□ 1.45
CIRBP-209ENST00000586555 ACAD9Q9H845 621 aa24.14■■□□□ 1.45
CIRBP-209ENST00000586555 E7EWF7 191 aa24.13■■□□□ 1.45
CIRBP-209ENST00000586555 CDC45O75419 566 aa24.13■■□□□ 1.45
CIRBP-209ENST00000586555 SLC16A2P36021 539 aa24.13■■□□□ 1.45
CIRBP-209ENST00000586555 PRAMEF19Q5SWL8 479 aa24.13■■□□□ 1.45
CIRBP-209ENST00000586555 RASGRP2Q7LDG7 609 aa24.13■■□□□ 1.45
CIRBP-209ENST00000586555 MSL3Q8N5Y2 521 aaKnown RBP24.13■■□□□ 1.45
CIRBP-209ENST00000586555 AGBL1Q96MI9 1066 aa24.13■■□□□ 1.45
CIRBP-209ENST00000586555 TRERF1Q96PN7 1200 aa24.13■■□□□ 1.45
CIRBP-209ENST00000586555 ANO2Q9NQ90 1003 aa24.13■■□□□ 1.45
CIRBP-209ENST00000586555 HOMER2Q9NSB8 354 aa24.13■■□□□ 1.45
CIRBP-209ENST00000586555 NRBP1Q9UHY1 535 aa24.13■■□□□ 1.45
CIRBP-209ENST00000586555 ICAM1P05362 532 aa24.12■■□□□ 1.45
CIRBP-209ENST00000586555 ALAS1P13196 640 aa24.12■■□□□ 1.45
CIRBP-209ENST00000586555 ARRDC4Q8NCT1 418 aa24.12■■□□□ 1.45
CIRBP-209ENST00000586555 LRCH3Q96II8 777 aa24.12■■□□□ 1.45
CIRBP-209ENST00000586555 TINF2Q9BSI4 451 aa24.12■■□□□ 1.45
CIRBP-209ENST00000586555 LSG1Q9H089 658 aaKnown RBP24.12■■□□□ 1.45
CIRBP-209ENST00000586555 RANBP17Q9H2T7 1088 aaKnown RBP24.12■■□□□ 1.45
CIRBP-209ENST00000586555 RNF146Q9NTX7 359 aa24.12■■□□□ 1.45
CIRBP-209ENST00000586555 PPP4R2Q9NY27 417 aa24.12■■□□□ 1.45
CIRBP-209ENST00000586555 CCPG1Q9ULG6 757 aa24.12■■□□□ 1.45
CIRBP-209ENST00000586555 ZNF536O15090 1300 aa24.11■■□□□ 1.45
CIRBP-209ENST00000586555 ASPRV1Q53RT3 343 aa24.11■■□□□ 1.45
CIRBP-209ENST00000586555 GJC2Q5T442 439 aaPredicted RBP24.11■■□□□ 1.45
CIRBP-209ENST00000586555 DNAJC25-GNG10A0A024R161 153 aa24.1■■□□□ 1.45
CIRBP-209ENST00000586555 IFIT3O14879 490 aaKnown RBP24.1■■□□□ 1.45
CIRBP-209ENST00000586555 SNAP25P60880 206 aa24.1■■□□□ 1.45
CIRBP-209ENST00000586555 LRIT3Q3SXY7 679 aa24.1■■□□□ 1.45
CIRBP-209ENST00000586555 RNF20Q5VTR2 975 aa24.1■■□□□ 1.45
CIRBP-209ENST00000586555 CYB5R4Q7L1T6 521 aa24.1■■□□□ 1.45
CIRBP-209ENST00000586555 CNPY2Q9Y2B0 182 aa24.1■■□□□ 1.45
CIRBP-209ENST00000586555 PARP1P09874 1014 aaKnown RBP24.09■■□□□ 1.45
CIRBP-209ENST00000586555 ANO1Q5XXA6 986 aa24.09■■□□□ 1.45
CIRBP-209ENST00000586555 ZNF467Q7Z7K2 595 aaPredicted RBP24.09■■□□□ 1.45
CIRBP-209ENST00000586555 TDHQ8IZJ6 230 aa24.09■■□□□ 1.45
CIRBP-209ENST00000586555 POTEB2H3BUK9 544 aa24.08■■□□□ 1.45
CIRBP-209ENST00000586555 GOLGA8HP0CJ92 632 aa24.08■■□□□ 1.45
CIRBP-209ENST00000586555 SEC23AQ15436 765 aa24.08■■□□□ 1.45
CIRBP-209ENST00000586555 GPR153Q6NV75 609 aa24.08■■□□□ 1.45
CIRBP-209ENST00000586555 UBE2OQ9C0C9 1292 aaKnown RBP24.08■■□□□ 1.45
CIRBP-209ENST00000586555 SYNGAP1Q96PV0 1343 aa24.08■■□□□ 1.44
CIRBP-209ENST00000586555 ATN1P54259 1190 aaPredicted RBP24.07■■□□□ 1.44
CIRBP-209ENST00000586555 WTAPQ15007 396 aa24.07■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms