RNA–Protein interactions for RNA: ENST00000581160.5

CDK5RAP3-220, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 3

Gene CDK5RAP3, Length 490 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-220ENST00000581160 ATP2A1O14983 1001 aa10.58□□□□□ -0.72
CDK5RAP3-220ENST00000581160 PDCP20941 246 aa10.58□□□□□ -0.72
CDK5RAP3-220ENST00000581160 OAZ1P54368 228 aa10.58□□□□□ -0.72
CDK5RAP3-220ENST00000581160 SNAP25P60880 206 aa10.58□□□□□ -0.72
CDK5RAP3-220ENST00000581160 IRX3P78415 501 aaPredicted RBP10.58□□□□□ -0.72
CDK5RAP3-220ENST00000581160 SREBF2Q12772 1141 aa10.58□□□□□ -0.72
CDK5RAP3-220ENST00000581160 NOGQ13253 232 aa10.58□□□□□ -0.72
CDK5RAP3-220ENST00000581160 QRICH1Q2TAL8 776 aa10.58□□□□□ -0.72
CDK5RAP3-220ENST00000581160 LARP1BQ659C4 914 aaKnown RBP10.58□□□□□ -0.72
CDK5RAP3-220ENST00000581160 FBXO11Q86XK2 927 aa10.58□□□□□ -0.72
CDK5RAP3-220ENST00000581160 HOMER1Q86YM7 354 aa10.58□□□□□ -0.72
CDK5RAP3-220ENST00000581160 FAM177A1Q8N128 213 aaPredicted RBP10.58□□□□□ -0.72
CDK5RAP3-220ENST00000581160 FAM43AQ8N2R8 423 aa10.58□□□□□ -0.72
CDK5RAP3-220ENST00000581160 ZNF713Q8N859 430 aaPredicted RBP10.58□□□□□ -0.72
CDK5RAP3-220ENST00000581160 MB21D1Q8N884 522 aa10.58□□□□□ -0.72
CDK5RAP3-220ENST00000581160 REPS2Q8NFH8 660 aa10.58□□□□□ -0.72
CDK5RAP3-220ENST00000581160 GTF3C2Q8WUA4 911 aaPredicted RBP10.58□□□□□ -0.72
CDK5RAP3-220ENST00000581160 ATG4CQ96DT6 458 aa10.58□□□□□ -0.72
CDK5RAP3-220ENST00000581160 ALG1Q9BT22 464 aa10.58□□□□□ -0.72
CDK5RAP3-220ENST00000581160 AMNQ9BXJ7 453 aa10.58□□□□□ -0.72
CDK5RAP3-220ENST00000581160 SH3GLB2Q9NR46 395 aa10.58□□□□□ -0.72
CDK5RAP3-220ENST00000581160 CTDP1Q9Y5B0 961 aaPredicted RBP10.58□□□□□ -0.72
CDK5RAP3-220ENST00000581160 RLFQ13129 1914 aa10.57□□□□□ -0.72
CDK5RAP3-220ENST00000581160 IGF2BP3O00425 579 aaKnown RBP eCLIP10.57□□□□□ -0.72
CDK5RAP3-220ENST00000581160 PPP1R11O60927 126 aaPredicted RBP10.57□□□□□ -0.72
CDK5RAP3-220ENST00000581160 ICAM1P05362 532 aa10.57□□□□□ -0.72
CDK5RAP3-220ENST00000581160 XBP1P17861 261 aa10.57□□□□□ -0.72
CDK5RAP3-220ENST00000581160 MAP2K2P36507 400 aa10.57□□□□□ -0.72
CDK5RAP3-220ENST00000581160 C1QTNF8P60827 252 aa10.57□□□□□ -0.72
CDK5RAP3-220ENST00000581160 HERVK_113P62684 666 aa10.57□□□□□ -0.72
CDK5RAP3-220ENST00000581160 CCDC174Q6PII3 467 aa10.57□□□□□ -0.72
CDK5RAP3-220ENST00000581160 POTEEQ6S8J3 1075 aa10.57□□□□□ -0.72
CDK5RAP3-220ENST00000581160 SAMD1Q6SPF0 538 aaPredicted RBP10.57□□□□□ -0.72
CDK5RAP3-220ENST00000581160 IFNL1Q8IU54 200 aa10.57□□□□□ -0.72
CDK5RAP3-220ENST00000581160 AIFM3Q96NN9 605 aa10.57□□□□□ -0.72
CDK5RAP3-220ENST00000581160 ZIC5Q96T25 663 aa10.57□□□□□ -0.72
CDK5RAP3-220ENST00000581160 BARHL2Q9NY43 387 aa10.57□□□□□ -0.72
CDK5RAP3-220ENST00000581160 RBPJLQ9UBG7 517 aa10.57□□□□□ -0.72
CDK5RAP3-220ENST00000581160 ZNF536O15090 1300 aa10.57□□□□□ -0.72
CDK5RAP3-220ENST00000581160 WDR33Q9C0J8 1336 aaKnown RBP10.57□□□□□ -0.72
CDK5RAP3-220ENST00000581160 STXBP3O00186 592 aa10.56□□□□□ -0.72
CDK5RAP3-220ENST00000581160 AOC2O75106 756 aa10.56□□□□□ -0.72
CDK5RAP3-220ENST00000581160 CYP2C8P10632 490 aa10.56□□□□□ -0.72
CDK5RAP3-220ENST00000581160 HSPA6P17066 643 aa10.56□□□□□ -0.72
CDK5RAP3-220ENST00000581160 SYT1P21579 422 aa10.56□□□□□ -0.72
CDK5RAP3-220ENST00000581160 DDIT3P35638 169 aa10.56□□□□□ -0.72
CDK5RAP3-220ENST00000581160 GCLCP48506 637 aaPredicted RBP10.56□□□□□ -0.72
CDK5RAP3-220ENST00000581160 VEGFBP49765 207 aa10.56□□□□□ -0.72
CDK5RAP3-220ENST00000581160 GRM1Q13255 1194 aa10.56□□□□□ -0.72
CDK5RAP3-220ENST00000581160 TRIM29Q14134 588 aa10.56□□□□□ -0.72
CDK5RAP3-220ENST00000581160 TMEM132BQ14DG7 1078 aa10.56□□□□□ -0.72
CDK5RAP3-220ENST00000581160 TKFCQ3LXA3 575 aa10.56□□□□□ -0.72
CDK5RAP3-220ENST00000581160 WWC2Q6AWC2 1192 aa10.56□□□□□ -0.72
CDK5RAP3-220ENST00000581160 HEATR3Q7Z4Q2 680 aa10.56□□□□□ -0.72
CDK5RAP3-220ENST00000581160 FBXO18Q8NFZ0 1043 aa10.56□□□□□ -0.72
CDK5RAP3-220ENST00000581160 CCDC12Q8WUD4 166 aaPredicted RBP10.56□□□□□ -0.72
CDK5RAP3-220ENST00000581160 COA7Q96BR5 231 aa10.56□□□□□ -0.72
CDK5RAP3-220ENST00000581160 C8orf76Q96K31 380 aa10.56□□□□□ -0.72
CDK5RAP3-220ENST00000581160 AGBL1Q96MI9 1066 aa10.56□□□□□ -0.72
CDK5RAP3-220ENST00000581160 RAVER2Q9HCJ3 691 aaKnown RBP10.56□□□□□ -0.72
CDK5RAP3-220ENST00000581160 RABGAP1Q9Y3P9 1069 aa10.56□□□□□ -0.72
CDK5RAP3-220ENST00000581160 PCDHA1Q9Y5I3 950 aa10.56□□□□□ -0.72
CDK5RAP3-220ENST00000581160 ABCB11O95342 1321 aa10.56□□□□□ -0.72
CDK5RAP3-220ENST00000581160 MYH6P13533 1939 aa10.55□□□□□ -0.72
CDK5RAP3-220ENST00000581160 CNMDO75829 334 aa10.55□□□□□ -0.72
CDK5RAP3-220ENST00000581160 ALDH1A1P00352 501 aa10.55□□□□□ -0.72
CDK5RAP3-220ENST00000581160 STAT3P40763 770 aa10.55□□□□□ -0.72
CDK5RAP3-220ENST00000581160 HTRA3P83110 453 aa10.55□□□□□ -0.72
CDK5RAP3-220ENST00000581160 KRT40Q6A162 431 aa10.55□□□□□ -0.72
CDK5RAP3-220ENST00000581160 GALNT17Q6IS24 598 aa10.55□□□□□ -0.72
CDK5RAP3-220ENST00000581160 PPP1R18Q6NYC8 613 aa10.55□□□□□ -0.72
CDK5RAP3-220ENST00000581160 CPXCR1Q8N123 301 aa10.55□□□□□ -0.72
CDK5RAP3-220ENST00000581160 CCDC148Q8NFR7 591 aa10.55□□□□□ -0.72
CDK5RAP3-220ENST00000581160 GPKOWQ92917 476 aaPredicted RBP eCLIP10.55□□□□□ -0.72
CDK5RAP3-220ENST00000581160 SHISA4Q96DD7 197 aa10.55□□□□□ -0.72
CDK5RAP3-220ENST00000581160 PARK7Q99497 189 aaKnown RBP10.55□□□□□ -0.72
CDK5RAP3-220ENST00000581160 PHF20Q9BVI0 1012 aa10.55□□□□□ -0.72
CDK5RAP3-220ENST00000581160 VPS54Q9P1Q0 977 aa10.55□□□□□ -0.72
CDK5RAP3-220ENST00000581160 BTBD7Q9P203 1132 aa10.55□□□□□ -0.72
CDK5RAP3-220ENST00000581160 ZNF214Q9UL59 606 aaPredicted RBP10.55□□□□□ -0.72
CDK5RAP3-220ENST00000581160 MRPL11Q9Y3B7 192 aaKnown RBP10.55□□□□□ -0.72
CDK5RAP3-220ENST00000581160 PARP14Q460N5 1801 aa10.55□□□□□ -0.72
CDK5RAP3-220ENST00000581160 ESYT2A0FGR8 921 aa10.54□□□□□ -0.72
CDK5RAP3-220ENST00000581160 SMCO2A6NFE2 343 aa10.54□□□□□ -0.72
CDK5RAP3-220ENST00000581160 H3BQV1 296 aa10.54□□□□□ -0.72
CDK5RAP3-220ENST00000581160 STX6O43752 255 aa10.54□□□□□ -0.72
CDK5RAP3-220ENST00000581160 CALML3P27482 149 aa10.54□□□□□ -0.72
CDK5RAP3-220ENST00000581160 GNA11P29992 359 aa10.54□□□□□ -0.72
CDK5RAP3-220ENST00000581160 MRPL12P52815 198 aaKnown RBP10.54□□□□□ -0.72
CDK5RAP3-220ENST00000581160 NAPAP54920 295 aa10.54□□□□□ -0.72
CDK5RAP3-220ENST00000581160 NLRP5P59047 1200 aa10.54□□□□□ -0.72
CDK5RAP3-220ENST00000581160 TAF1CQ15572 869 aaPredicted RBP10.54□□□□□ -0.72
CDK5RAP3-220ENST00000581160 Q3C1V9 767 aa10.54□□□□□ -0.72
CDK5RAP3-220ENST00000581160 USH1GQ495M9 461 aa10.54□□□□□ -0.72
CDK5RAP3-220ENST00000581160 IFFO2Q5TF58 517 aa10.54□□□□□ -0.72
CDK5RAP3-220ENST00000581160 TYW1BQ6NUM6 668 aa10.54□□□□□ -0.72
CDK5RAP3-220ENST00000581160 TEX2Q8IWB9 1127 aa10.54□□□□□ -0.72
CDK5RAP3-220ENST00000581160 SAMD3Q8N6K7 520 aa10.54□□□□□ -0.72
CDK5RAP3-220ENST00000581160 GPRC5AQ8NFJ5 357 aa10.54□□□□□ -0.72
CDK5RAP3-220ENST00000581160 TEX13BQ9BXU2 312 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 83.3 ms