RNA–Protein interactions for RNA: ENST00000580888.5

EIF4A1-216, Transcript of eukaryotic translation initiation factor 4A1, humanhuman

TSL 2

Gene EIF4A1, Length 710 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EIF4A1-216ENST00000580888 PRPF3O43395 683 aaKnown RBP20.57■□□□□ 0.88
EIF4A1-216ENST00000580888 ECM2O94769 699 aaPredicted RBP20.57■□□□□ 0.88
EIF4A1-216ENST00000580888 DEXIO95424 95 aa20.57■□□□□ 0.88
EIF4A1-216ENST00000580888 GCLCP48506 637 aaPredicted RBP20.57■□□□□ 0.88
EIF4A1-216ENST00000580888 BACE1P56817 501 aa20.57■□□□□ 0.88
EIF4A1-216ENST00000580888 IRF5Q13568 498 aa20.57■□□□□ 0.88
EIF4A1-216ENST00000580888 KRT40Q6A162 431 aa20.57■□□□□ 0.88
EIF4A1-216ENST00000580888 TATDN1Q6P1N9 297 aa20.57■□□□□ 0.88
EIF4A1-216ENST00000580888 GAS2L3Q86XJ1 694 aa20.57■□□□□ 0.88
EIF4A1-216ENST00000580888 ZNF444Q8N0Y2 327 aaPredicted RBP20.57■□□□□ 0.88
EIF4A1-216ENST00000580888 SLAIN1Q8ND83 568 aa20.57■□□□□ 0.88
EIF4A1-216ENST00000580888 AIFM3Q96NN9 605 aa20.57■□□□□ 0.88
EIF4A1-216ENST00000580888 SLC26A6Q9BXS9 759 aa20.57■□□□□ 0.88
EIF4A1-216ENST00000580888 MKNK2Q9HBH9 465 aa20.57■□□□□ 0.88
EIF4A1-216ENST00000580888 TFIP11Q9UBB9 837 aaKnown RBP20.57■□□□□ 0.88
EIF4A1-216ENST00000580888 ZBTB21Q9ULJ3 1066 aa20.57■□□□□ 0.88
EIF4A1-216ENST00000580888 PLXNB2O15031 1838 aa20.57■□□□□ 0.88
EIF4A1-216ENST00000580888 GOLGA6L3A6NEY3 463 aa20.56■□□□□ 0.88
EIF4A1-216ENST00000580888 C19orf81C9J6K1 198 aa20.56■□□□□ 0.88
EIF4A1-216ENST00000580888 NMT2O60551 498 aa20.56■□□□□ 0.88
EIF4A1-216ENST00000580888 U2AF2P26368 475 aaKnown RBP eCLIP20.56■□□□□ 0.883e-13■■■■□ 19.4
EIF4A1-216ENST00000580888 GUCY1B3Q02153 619 aa20.56■□□□□ 0.88
EIF4A1-216ENST00000580888 L1TD1Q5T7N2 865 aaKnown RBP20.56■□□□□ 0.88
EIF4A1-216ENST00000580888 TMTC3Q6ZXV5 915 aa20.56■□□□□ 0.88
EIF4A1-216ENST00000580888 TRIM22Q8IYM9 498 aa20.56■□□□□ 0.88
EIF4A1-216ENST00000580888 NUP133Q8WUM0 1156 aa20.56■□□□□ 0.88
EIF4A1-216ENST00000580888 SYAP1Q96A49 352 aaPredicted RBP20.56■□□□□ 0.88
EIF4A1-216ENST00000580888 SPATA32Q96LK8 384 aa20.56■□□□□ 0.88
EIF4A1-216ENST00000580888 TRIM34Q9BYJ4 488 aa20.56■□□□□ 0.88
EIF4A1-216ENST00000580888 RTEL1Q9NZ71 1219 aa20.56■□□□□ 0.88
EIF4A1-216ENST00000580888 GABRQQ9UN88 632 aa20.56■□□□□ 0.88
EIF4A1-216ENST00000580888 MYH8P13535 1937 aa20.56■□□□□ 0.88
EIF4A1-216ENST00000580888 KIF28PB7ZC32 967 aa20.55■□□□□ 0.88
EIF4A1-216ENST00000580888 HOXA7P31268 230 aaPredicted RBP20.55■□□□□ 0.88
EIF4A1-216ENST00000580888 FOSBP53539 338 aa20.55■□□□□ 0.88
EIF4A1-216ENST00000580888 MTFR1Q15390 333 aa20.55■□□□□ 0.88
EIF4A1-216ENST00000580888 ANKRD13CQ8N6S4 541 aa20.55■□□□□ 0.88
EIF4A1-216ENST00000580888 SLC44A5Q8NCS7 719 aa20.55■□□□□ 0.88
EIF4A1-216ENST00000580888 PXYLP1Q8TE99 480 aa20.55■□□□□ 0.88
EIF4A1-216ENST00000580888 ASCC2Q9H1I8 757 aaPredicted RBP20.55■□□□□ 0.88
EIF4A1-216ENST00000580888 GJB4Q9NTQ9 266 aa20.55■□□□□ 0.88
EIF4A1-216ENST00000580888 TNPO2O14787 897 aaKnown RBP20.54■□□□□ 0.88
EIF4A1-216ENST00000580888 GDF11O95390 407 aa20.54■□□□□ 0.88
EIF4A1-216ENST00000580888 GUCY1A2P33402 732 aa20.54■□□□□ 0.88
EIF4A1-216ENST00000580888 FLT3LGP49771 235 aa20.54■□□□□ 0.88
EIF4A1-216ENST00000580888 MTMR2Q13614 643 aa20.54■□□□□ 0.88
EIF4A1-216ENST00000580888 PKN1Q16512 942 aa20.54■□□□□ 0.88
EIF4A1-216ENST00000580888 PGBD1Q96JS3 809 aa20.54■□□□□ 0.88
EIF4A1-216ENST00000580888 USP28Q96RU2 1077 aa20.54■□□□□ 0.88
EIF4A1-216ENST00000580888 MORF4L1Q9UBU8 362 aa20.54■□□□□ 0.88
EIF4A1-216ENST00000580888 SERPINB13Q9UIV8 391 aa20.54■□□□□ 0.88
EIF4A1-216ENST00000580888 IGKV6D-41A0A0C4DH26 115 aa20.53■□□□□ 0.88
EIF4A1-216ENST00000580888 USP17L10C9JJH3 530 aa20.53■□□□□ 0.88
EIF4A1-216ENST00000580888 GJB1P08034 283 aa20.53■□□□□ 0.88
EIF4A1-216ENST00000580888 TSPY3P0CV98 308 aa20.53■□□□□ 0.88
EIF4A1-216ENST00000580888 TSPY8P0CW00 308 aa20.53■□□□□ 0.88
EIF4A1-216ENST00000580888 NASPP49321 788 aaPredicted RBP20.53■□□□□ 0.88
EIF4A1-216ENST00000580888 UBXN2AP68543 259 aa20.53■□□□□ 0.88
EIF4A1-216ENST00000580888 SHROOM1Q2M3G4 852 aaPredicted RBP20.53■□□□□ 0.88
EIF4A1-216ENST00000580888 MYSM1Q5VVJ2 828 aa20.53■□□□□ 0.88
EIF4A1-216ENST00000580888 SHISA4Q96DD7 197 aa20.53■□□□□ 0.88
EIF4A1-216ENST00000580888 POLR3EQ9NVU0 708 aa20.53■□□□□ 0.88
EIF4A1-216ENST00000580888 TMOD4Q9NZQ9 345 aa20.53■□□□□ 0.88
EIF4A1-216ENST00000580888 SWAP70Q9UH65 585 aa20.53■□□□□ 0.88
EIF4A1-216ENST00000580888 CNTNAP5Q8WYK1 1306 aa20.53■□□□□ 0.88
EIF4A1-216ENST00000580888 ADCY3O60266 1144 aa20.52■□□□□ 0.88
EIF4A1-216ENST00000580888 YEATS4O95619 227 aa20.52■□□□□ 0.88
EIF4A1-216ENST00000580888 CCL5P13501 91 aa20.52■□□□□ 0.88
EIF4A1-216ENST00000580888 MRE11P49959 708 aa20.52■□□□□ 0.88
EIF4A1-216ENST00000580888 GRM4Q14833 912 aa20.52■□□□□ 0.88
EIF4A1-216ENST00000580888 CCDC183Q5T5S1 534 aa20.52■□□□□ 0.88
EIF4A1-216ENST00000580888 LRSAM1Q6UWE0 723 aa20.52■□□□□ 0.88
EIF4A1-216ENST00000580888 COA7Q96BR5 231 aa20.52■□□□□ 0.88
EIF4A1-216ENST00000580888 GNL3Q9BVP2 549 aaKnown RBP eCLIP20.52■□□□□ 0.88
EIF4A1-216ENST00000580888 KAT14Q9H8E8 782 aa20.52■□□□□ 0.88
EIF4A1-216ENST00000580888 LETM1O95202 739 aaPredicted RBP20.51■□□□□ 0.87
EIF4A1-216ENST00000580888 PLEKHA8P1O95397 391 aa20.51■□□□□ 0.87
EIF4A1-216ENST00000580888 MYCP01106 439 aaPredicted RBP20.51■□□□□ 0.87
EIF4A1-216ENST00000580888 MMP1P03956 469 aa20.51■□□□□ 0.87
EIF4A1-216ENST00000580888 CAPN2P17655 700 aa20.51■□□□□ 0.87
EIF4A1-216ENST00000580888 GJA8P48165 433 aa20.51■□□□□ 0.87
EIF4A1-216ENST00000580888 SRBD1Q8N5C6 995 aaKnown RBP20.51■□□□□ 0.87
EIF4A1-216ENST00000580888 PNMA1Q8ND90 353 aa20.51■□□□□ 0.87
EIF4A1-216ENST00000580888 CTCFLQ8NI51 663 aaPredicted RBP20.51■□□□□ 0.87
EIF4A1-216ENST00000580888 GREB1LQ9C091 1923 aaPredicted RBP20.51■□□□□ 0.87
EIF4A1-216ENST00000580888 GH2P01242 217 aa20.5■□□□□ 0.87
EIF4A1-216ENST00000580888 KIF5BP33176 963 aa20.5■□□□□ 0.87
EIF4A1-216ENST00000580888 TRIM29Q14134 588 aa20.5■□□□□ 0.87
EIF4A1-216ENST00000580888 LINC00301Q8NCQ3 95 aa20.5■□□□□ 0.87
EIF4A1-216ENST00000580888 C12orf42Q96LP6 360 aa20.5■□□□□ 0.87
EIF4A1-216ENST00000580888 TMEM47Q9BQJ4 181 aa20.5■□□□□ 0.87
EIF4A1-216ENST00000580888 FOXP1Q9H334 677 aaPredicted RBP20.5■□□□□ 0.87
EIF4A1-216ENST00000580888 EMILIN3Q9NT22 766 aa20.5■□□□□ 0.87
EIF4A1-216ENST00000580888 GNAQP50148 359 aa20.49■□□□□ 0.87
EIF4A1-216ENST00000580888 IRX3P78415 501 aaPredicted RBP20.49■□□□□ 0.87
EIF4A1-216ENST00000580888 USP17L2Q6R6M4 530 aa20.49■□□□□ 0.87
EIF4A1-216ENST00000580888 UBE2Q1Q7Z7E8 422 aa20.49■□□□□ 0.87
EIF4A1-216ENST00000580888 CMTR1Q8N1G2 835 aaKnown RBP20.49■□□□□ 0.87
EIF4A1-216ENST00000580888 P2RX7Q99572 595 aaKnown RBP20.49■□□□□ 0.87
EIF4A1-216ENST00000580888 GRPEL1Q9HAV7 217 aa20.49■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 70.6 ms