RNA–Protein interactions for RNA: ENST00000578049.3

SEC22B-201, Transcript of SEC22 homolog B, vesicle trafficking protein (gene/pseudogene), humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC22B, Length 6,922 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22B-201ENST00000578049 RFC1P35251 1148 aaPredicted RBP11.77□□□□□ -0.53
SEC22B-201ENST00000578049 MRPS9P82933 396 aaKnown RBP11.77□□□□□ -0.53
SEC22B-201ENST00000578049 RILPQ96NA2 401 aa11.77□□□□□ -0.53
SEC22B-201ENST00000578049 PLEKHF1Q96S99 279 aa11.77□□□□□ -0.53
SEC22B-201ENST00000578049 RABEP2Q9H5N1 569 aa11.77□□□□□ -0.53
SEC22B-201ENST00000578049 TRPC6Q9Y210 931 aa11.77□□□□□ -0.53
SEC22B-201ENST00000578049 ANO9A1A5B4 782 aa11.77□□□□□ -0.53
SEC22B-201ENST00000578049 PRDM1O75626 825 aa11.77□□□□□ -0.53
SEC22B-201ENST00000578049 P4HA1P13674 534 aa11.77□□□□□ -0.53
SEC22B-201ENST00000578049 TFAP4Q01664 338 aa11.77□□□□□ -0.53
SEC22B-201ENST00000578049 DPCR1Q3MIW9 517 aa11.77□□□□□ -0.53
SEC22B-201ENST00000578049 CCDC125Q86Z20 511 aa11.77□□□□□ -0.53
SEC22B-201ENST00000578049 PALM2Q8IXS6 379 aa11.77□□□□□ -0.53
SEC22B-201ENST00000578049 FBXO41Q8TF61 875 aa11.77□□□□□ -0.53
SEC22B-201ENST00000578049 KRT12Q99456 494 aa11.77□□□□□ -0.53
SEC22B-201ENST00000578049 TXLNGQ9NUQ3 528 aa11.77□□□□□ -0.53
SEC22B-201ENST00000578049 STK17AQ9UEE5 414 aa11.77□□□□□ -0.53
SEC22B-201ENST00000578049 ADD1P35611 737 aaKnown RBP11.77□□□□□ -0.53
SEC22B-201ENST00000578049 CUL1Q13616 776 aa11.77□□□□□ -0.53
SEC22B-201ENST00000578049 PLS1Q14651 629 aa11.77□□□□□ -0.53
SEC22B-201ENST00000578049 RPAINQ86UA6 219 aa11.77□□□□□ -0.53
SEC22B-201ENST00000578049 GADD45GIP1Q8TAE8 222 aaPredicted RBP11.77□□□□□ -0.53
SEC22B-201ENST00000578049 RBM17Q96I25 401 aaKnown RBP11.77□□□□□ -0.53
SEC22B-201ENST00000578049 BPIFA3Q9BQP9 254 aa11.77□□□□□ -0.53
SEC22B-201ENST00000578049 RWDD2AQ9UIY3 292 aa11.77□□□□□ -0.53
SEC22B-201ENST00000578049 TNKSO95271 1327 aa11.76□□□□□ -0.53
SEC22B-201ENST00000578049 ERVV-2B6SEH9 535 aa11.76□□□□□ -0.53
SEC22B-201ENST00000578049 FOSP01100 380 aaPredicted RBP11.76□□□□□ -0.53
SEC22B-201ENST00000578049 FGAP02671 866 aa11.76□□□□□ -0.53
SEC22B-201ENST00000578049 CLTAP09496 248 aa11.76□□□□□ -0.53
SEC22B-201ENST00000578049 ADCY8P40145 1251 aa11.76□□□□□ -0.53
SEC22B-201ENST00000578049 GEN1Q17RS7 908 aa11.76□□□□□ -0.53
SEC22B-201ENST00000578049 NELFCDQ8IXH7 590 aa11.76□□□□□ -0.53
SEC22B-201ENST00000578049 ATG3Q9NT62 314 aa11.76□□□□□ -0.53
SEC22B-201ENST00000578049 TXNDC9O14530 226 aa11.76□□□□□ -0.53
SEC22B-201ENST00000578049 HEXIM1O94992 359 aaKnown RBP11.76□□□□□ -0.53
SEC22B-201ENST00000578049 ADAMTS2O95450 1211 aa11.76□□□□□ -0.53
SEC22B-201ENST00000578049 POLR2BP30876 1174 aaKnown RBP11.76□□□□□ -0.53
SEC22B-201ENST00000578049 CTDSPL2Q05D32 466 aa11.76□□□□□ -0.53
SEC22B-201ENST00000578049 TTLL12Q14166 644 aaPredicted RBP11.76□□□□□ -0.53
SEC22B-201ENST00000578049 CASP8Q14790 479 aa11.76□□□□□ -0.53
SEC22B-201ENST00000578049 SEPT14Q6ZU15 432 aa11.76□□□□□ -0.53
SEC22B-201ENST00000578049 FAM212AQ96EL1 285 aa11.76□□□□□ -0.53
SEC22B-201ENST00000578049 CCDC188H7C350 402 aa11.76□□□□□ -0.53
SEC22B-201ENST00000578049 ATF2P15336 505 aa11.76□□□□□ -0.53
SEC22B-201ENST00000578049 STK38LQ9Y2H1 464 aa11.76□□□□□ -0.53
SEC22B-201ENST00000578049 DAAM1Q9Y4D1 1078 aa11.76□□□□□ -0.53
SEC22B-201ENST00000578049 KIF23Q02241 960 aaPredicted RBP11.76□□□□□ -0.53
SEC22B-201ENST00000578049 GPBP1Q86WP2 473 aa11.76□□□□□ -0.53
SEC22B-201ENST00000578049 HOOK2Q96ED9 719 aa11.76□□□□□ -0.53
SEC22B-201ENST00000578049 CALR3Q96L12 384 aaKnown RBP11.76□□□□□ -0.53
SEC22B-201ENST00000578049 NRBP1Q9UHY1 535 aa11.76□□□□□ -0.53
SEC22B-201ENST00000578049 IFNAR1P17181 557 aa11.76□□□□□ -0.53
SEC22B-201ENST00000578049 PDE6BP35913 854 aa11.76□□□□□ -0.53
SEC22B-201ENST00000578049 KCNJ6P48051 423 aa11.76□□□□□ -0.53
SEC22B-201ENST00000578049 HVCN1Q96D96 273 aa11.76□□□□□ -0.53
SEC22B-201ENST00000578049 EPB41L3Q9Y2J2 1087 aaPredicted RBP11.76□□□□□ -0.53
SEC22B-201ENST00000578049 SART1O43290 800 aaKnown RBP11.75□□□□□ -0.53
SEC22B-201ENST00000578049 GCFC2P16383 781 aaKnown RBP11.75□□□□□ -0.53
SEC22B-201ENST00000578049 FKBP3Q00688 224 aaKnown RBP11.75□□□□□ -0.53
SEC22B-201ENST00000578049 ZNF658Q5TYW1 1059 aaPredicted RBP11.75□□□□□ -0.53
SEC22B-201ENST00000578049 APOA5Q6Q788 366 aa11.75□□□□□ -0.53
SEC22B-201ENST00000578049 STAMQ92783 540 aa11.75□□□□□ -0.53
SEC22B-201ENST00000578049 CNOT6LQ96LI5 555 aaKnown RBP11.75□□□□□ -0.53
SEC22B-201ENST00000578049 OSBPL5Q9H0X9 879 aaPredicted RBP11.75□□□□□ -0.53
SEC22B-201ENST00000578049 THAP9Q9H5L6 903 aa11.75□□□□□ -0.53
SEC22B-201ENST00000578049 ARHGEF5Q12774 1597 aa11.75□□□□□ -0.53
SEC22B-201ENST00000578049 IFT88Q13099 833 aa11.75□□□□□ -0.53
SEC22B-201ENST00000578049 RASIP1Q5U651 963 aa11.75□□□□□ -0.53
SEC22B-201ENST00000578049 SYMPKQ92797 1274 aaKnown RBP11.75□□□□□ -0.53
SEC22B-201ENST00000578049 PFDN4Q9NQP4 134 aa11.75□□□□□ -0.53
SEC22B-201ENST00000578049 PTCH1Q13635 1447 aa11.75□□□□□ -0.53
SEC22B-201ENST00000578049 FMNL1O95466 1100 aaPredicted RBP11.75□□□□□ -0.53
SEC22B-201ENST00000578049 PCCAP05165 728 aaPredicted RBP11.75□□□□□ -0.53
SEC22B-201ENST00000578049 STMN1P16949 149 aa11.75□□□□□ -0.53
SEC22B-201ENST00000578049 FBXO38Q6PIJ6 1188 aa11.75□□□□□ -0.53
SEC22B-201ENST00000578049 C11orf57Q6ZUT1 292 aaPredicted RBP11.75□□□□□ -0.53
SEC22B-201ENST00000578049 RSAD2Q8WXG1 361 aa11.75□□□□□ -0.53
SEC22B-201ENST00000578049 P2RX5Q93086 422 aa11.75□□□□□ -0.53
SEC22B-201ENST00000578049 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.75□□□□□ -0.53
SEC22B-201ENST00000578049 PCDHA12Q9UN75 941 aa11.75□□□□□ -0.53
SEC22B-201ENST00000578049 F8W031 263 aaPredicted RBP11.75□□□□□ -0.53
SEC22B-201ENST00000578049 SKIP12755 728 aa11.75□□□□□ -0.53
SEC22B-201ENST00000578049 PTGDRQ13258 359 aa11.75□□□□□ -0.53
SEC22B-201ENST00000578049 ATP7AQ04656 1500 aa11.75□□□□□ -0.53
SEC22B-201ENST00000578049 CHUKO15111 745 aa11.75□□□□□ -0.53
SEC22B-201ENST00000578049 EXOC3L4Q17RC7 722 aa11.75□□□□□ -0.53
SEC22B-201ENST00000578049 ZNF496Q96IT1 587 aaPredicted RBP11.75□□□□□ -0.53
SEC22B-201ENST00000578049 HAUS8Q9BT25 410 aa11.75□□□□□ -0.53
SEC22B-201ENST00000578049 TRIM4Q9C037 500 aa11.75□□□□□ -0.53
SEC22B-201ENST00000578049 CLIC4Q9Y696 253 aa11.75□□□□□ -0.53
SEC22B-201ENST00000578049 CPSF1Q10570 1443 aaKnown RBP11.75□□□□□ -0.53
SEC22B-201ENST00000578049 POLR2FP61218 127 aaKnown RBP11.74□□□□□ -0.53
SEC22B-201ENST00000578049 ZBTB17Q13105 803 aa11.74□□□□□ -0.53
SEC22B-201ENST00000578049 RESTQ13127 1097 aa11.74□□□□□ -0.53
SEC22B-201ENST00000578049 CFAP61Q8NHU2 1237 aa11.74□□□□□ -0.53
SEC22B-201ENST00000578049 KLHL29Q96CT2 875 aa11.74□□□□□ -0.53
SEC22B-201ENST00000578049 SLC12A2P55011 1212 aa11.74□□□□□ -0.53
SEC22B-201ENST00000578049 ADAM9Q13443 819 aa11.74□□□□□ -0.53
SEC22B-201ENST00000578049 DBN1Q16643 649 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms