RNA–Protein interactions for RNA: ENST00000577393.1

PPP4R1-204, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 4

Gene PPP4R1, Length 531 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-204ENST00000577393 DIS3Q9Y2L1 958 aaKnown RBP30.97■■■□□ 2.55
PPP4R1-204ENST00000577393 E7EWF7 191 aa30.96■■■□□ 2.55
PPP4R1-204ENST00000577393 DHX30Q7L2E3 1194 aaKnown RBP eCLIP30.96■■■□□ 2.55
PPP4R1-204ENST00000577393 TRPV1Q8NER1 839 aa30.96■■■□□ 2.55
PPP4R1-204ENST00000577393 DDX11Q96FC9 970 aa30.96■■■□□ 2.55
PPP4R1-204ENST00000577393 STOX1Q6ZVD7 989 aa30.95■■■□□ 2.55
PPP4R1-204ENST00000577393 RANBP17Q9H2T7 1088 aaKnown RBP30.95■■■□□ 2.55
PPP4R1-204ENST00000577393 OGDHLQ9ULD0 1010 aa30.95■■■□□ 2.55
PPP4R1-204ENST00000577393 CYBAP13498 195 aa30.94■■■□□ 2.54
PPP4R1-204ENST00000577393 SEC23AQ15436 765 aa30.94■■■□□ 2.54
PPP4R1-204ENST00000577393 TKFCQ3LXA3 575 aa30.94■■■□□ 2.54
PPP4R1-204ENST00000577393 LHX8Q68G74 356 aa30.94■■■□□ 2.54
PPP4R1-204ENST00000577393 ANKRD35Q8N283 1001 aa30.94■■■□□ 2.54
PPP4R1-204ENST00000577393 NCOA7Q8NI08 942 aa30.94■■■□□ 2.54
PPP4R1-204ENST00000577393 DNAJC25-GNG10A0A024R161 153 aa30.93■■■□□ 2.54
PPP4R1-204ENST00000577393 GOLGA8HP0CJ92 632 aa30.93■■■□□ 2.54
PPP4R1-204ENST00000577393 ALAS1P13196 640 aa30.93■■■□□ 2.54
PPP4R1-204ENST00000577393 CNGA1P29973 690 aa30.93■■■□□ 2.54
PPP4R1-204ENST00000577393 GPATCH4Q5T3I0 446 aaKnown RBP30.93■■■□□ 2.54
PPP4R1-204ENST00000577393 IFIT1BQ5T764 474 aaKnown RBP30.93■■■□□ 2.54
PPP4R1-204ENST00000577393 RALYLQ86SE5 291 aaKnown RBP30.93■■■□□ 2.54
PPP4R1-204ENST00000577393 ACAD9Q9H845 621 aa30.93■■■□□ 2.54
PPP4R1-204ENST00000577393 ANO2Q9NQ90 1003 aa30.93■■■□□ 2.54
PPP4R1-204ENST00000577393 RNF146Q9NTX7 359 aa30.93■■■□□ 2.54
PPP4R1-204ENST00000577393 CDC45O75419 566 aa30.92■■■□□ 2.54
PPP4R1-204ENST00000577393 PRAMEF19Q5SWL8 479 aa30.92■■■□□ 2.54
PPP4R1-204ENST00000577393 ANKLE1Q8NAG6 615 aa30.92■■■□□ 2.54
PPP4R1-204ENST00000577393 TRERF1Q96PN7 1200 aa30.92■■■□□ 2.54
PPP4R1-204ENST00000577393 CCPG1Q9ULG6 757 aa30.92■■■□□ 2.54
PPP4R1-204ENST00000577393 PLXNA1Q9UIW2 1896 aa30.92■■■□□ 2.54
PPP4R1-204ENST00000577393 ICAM1P05362 532 aa30.91■■■□□ 2.54
PPP4R1-204ENST00000577393 CASC1Q6TDU7 716 aa30.91■■■□□ 2.54
PPP4R1-204ENST00000577393 TINF2Q9BSI4 451 aa30.91■■■□□ 2.54
PPP4R1-204ENST00000577393 DDX20Q9UHI6 824 aaKnown RBP30.91■■■□□ 2.54
PPP4R1-204ENST00000577393 TAL1P17542 331 aaPredicted RBP30.9■■■□□ 2.54
PPP4R1-204ENST00000577393 ERICH6BQ5W0A0 696 aa30.9■■■□□ 2.54
PPP4R1-204ENST00000577393 DIS3LQ8TF46 1054 aaKnown RBP30.9■■■□□ 2.54
PPP4R1-204ENST00000577393 PAWRQ96IZ0 340 aaKnown RBP30.9■■■□□ 2.54
PPP4R1-204ENST00000577393 UBA5Q9GZZ9 404 aa30.9■■■□□ 2.54
PPP4R1-204ENST00000577393 PPP4R2Q9NY27 417 aa30.9■■■□□ 2.54
PPP4R1-204ENST00000577393 IFIT3O14879 490 aaKnown RBP30.89■■■□□ 2.54
PPP4R1-204ENST00000577393 SLC27A2O14975 620 aa30.89■■■□□ 2.54
PPP4R1-204ENST00000577393 MNX1P50219 401 aaPredicted RBP30.89■■■□□ 2.54
PPP4R1-204ENST00000577393 CPVLQ9H3G5 476 aa30.89■■■□□ 2.54
PPP4R1-204ENST00000577393 MSCO60682 206 aa30.88■■■□□ 2.53
PPP4R1-204ENST00000577393 NECTIN1Q15223 517 aa30.88■■■□□ 2.53
PPP4R1-204ENST00000577393 MUM1L1Q5H9M0 696 aa30.88■■■□□ 2.53
PPP4R1-204ENST00000577393 CHST3Q7LGC8 479 aa30.88■■■□□ 2.53
PPP4R1-204ENST00000577393 MB21D2Q8IYB1 491 aaPredicted RBP30.88■■■□□ 2.53
PPP4R1-204ENST00000577393 A1CFQ9NQ94 594 aaKnown RBP30.88■■■□□ 2.53
PPP4R1-204ENST00000577393 SMCHD1A6NHR9 2005 aa30.88■■■□□ 2.53
PPP4R1-204ENST00000577393 PARP1P09874 1014 aaKnown RBP30.87■■■□□ 2.53
PPP4R1-204ENST00000577393 ASPRV1Q53RT3 343 aa30.87■■■□□ 2.53
PPP4R1-204ENST00000577393 CREB3L3Q68CJ9 461 aa30.87■■■□□ 2.53
PPP4R1-204ENST00000577393 NECAB2Q7Z6G3 386 aa30.87■■■□□ 2.53
PPP4R1-204ENST00000577393 NRBP1Q9UHY1 535 aa30.87■■■□□ 2.53
PPP4R1-204ENST00000577393 ERICH2A1L162 156 aa30.86■■■□□ 2.53
PPP4R1-204ENST00000577393 SEPT4O43236 478 aa30.86■■■□□ 2.53
PPP4R1-204ENST00000577393 ANTXR2P58335 489 aa30.86■■■□□ 2.53
PPP4R1-204ENST00000577393 PRPF38BQ5VTL8 546 aaKnown RBP30.86■■■□□ 2.53
PPP4R1-204ENST00000577393 ZNF467Q7Z7K2 595 aaPredicted RBP30.86■■■□□ 2.53
PPP4R1-204ENST00000577393 MSL3Q8N5Y2 521 aaKnown RBP30.86■■■□□ 2.53
PPP4R1-204ENST00000577393 FGD4Q96M96 766 aa30.86■■■□□ 2.53
PPP4R1-204ENST00000577393 HTATIP2Q9BUP3 242 aa30.86■■■□□ 2.53
PPP4R1-204ENST00000577393 POTEB2H3BUK9 544 aa30.85■■■□□ 2.53
PPP4R1-204ENST00000577393 CNTN2Q02246 1040 aa30.85■■■□□ 2.53
PPP4R1-204ENST00000577393 SART3Q15020 963 aaKnown RBP30.85■■■□□ 2.53
PPP4R1-204ENST00000577393 MAMDC4Q6UXC1 1216 aa30.85■■■□□ 2.53
PPP4R1-204ENST00000577393 SENP2Q9HC62 589 aa30.85■■■□□ 2.53
PPP4R1-204ENST00000577393 PFASO15067 1338 aa30.84■■■□□ 2.53
PPP4R1-204ENST00000577393 SYNGAP1Q96PV0 1343 aa30.84■■■□□ 2.53
PPP4R1-204ENST00000577393 WTAPQ15007 396 aa30.84■■■□□ 2.53
PPP4R1-204ENST00000577393 ANO1Q5XXA6 986 aa30.84■■■□□ 2.53
PPP4R1-204ENST00000577393 FAM133AQ8N9E0 248 aa30.84■■■□□ 2.53
PPP4R1-204ENST00000577393 DPF3Q92784 378 aa30.84■■■□□ 2.53
PPP4R1-204ENST00000577393 PNMA2Q9UL42 364 aa30.84■■■□□ 2.53
PPP4R1-204ENST00000577393 SNAI1O95863 264 aaPredicted RBP30.83■■■□□ 2.53
PPP4R1-204ENST00000577393 TMEM67Q5HYA8 995 aa30.83■■■□□ 2.53
PPP4R1-204ENST00000577393 ADGRF4Q8IZF3 695 aa30.83■■■□□ 2.53
PPP4R1-204ENST00000577393 IGDCC4Q8TDY8 1250 aa30.83■■■□□ 2.53
PPP4R1-204ENST00000577393 CYP39A1Q9NYL5 469 aa30.83■■■□□ 2.53
PPP4R1-204ENST00000577393 CNPY2Q9Y2B0 182 aa30.83■■■□□ 2.53
PPP4R1-204ENST00000577393 WDR19Q8NEZ3 1342 aa30.82■■■□□ 2.52
PPP4R1-204ENST00000577393 ZNF865P0CJ78 1059 aaPredicted RBP30.82■■■□□ 2.52
PPP4R1-204ENST00000577393 NSMFQ6X4W1 530 aa30.82■■■□□ 2.52
PPP4R1-204ENST00000577393 STAG2Q8N3U4 1231 aa30.82■■■□□ 2.52
PPP4R1-204ENST00000577393 C11orf49Q9H6J7 331 aa30.82■■■□□ 2.52
PPP4R1-204ENST00000577393 FRMPD3Q5JV73 1810 aa30.82■■■□□ 2.52
PPP4R1-204ENST00000577393 CDC37Q16543 378 aaPredicted RBP30.81■■■□□ 2.52
PPP4R1-204ENST00000577393 SOWAHBA6NEL2 793 aa30.8■■■□□ 2.52
PPP4R1-204ENST00000577393 NFIBO00712 420 aa30.8■■■□□ 2.52
PPP4R1-204ENST00000577393 CLEC4DQ8WXI8 215 aa30.8■■■□□ 2.52
PPP4R1-204ENST00000577393 VAT1LQ9HCJ6 419 aa30.8■■■□□ 2.52
PPP4R1-204ENST00000577393 CDKN2AIPQ9NXV6 580 aaPredicted RBP30.8■■■□□ 2.52
PPP4R1-204ENST00000577393 MAD2L2Q9UI95 211 aa30.8■■■□□ 2.52
PPP4R1-204ENST00000577393 PRC1O43663 620 aa30.79■■■□□ 2.52
PPP4R1-204ENST00000577393 DHX16O60231 1041 aaKnown RBP30.79■■■□□ 2.52
PPP4R1-204ENST00000577393 COL9A3Q14050 684 aaPredicted RBP30.79■■■□□ 2.52
PPP4R1-204ENST00000577393 RNF20Q5VTR2 975 aa30.79■■■□□ 2.52
PPP4R1-204ENST00000577393 ARMCX2Q7L311 632 aa30.79■■■□□ 2.52
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms