RNA–Protein interactions for RNA: ENST00000569820.5

SPG7-222, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, human

TSL 5

Gene SPG7, Length 2,305 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SPG7-222	ENST00000569820	TSPY2	A6NKD2	308 aa		13.51	□□□□□ -0.25
SPG7-222	ENST00000569820	CUTA	O60888	179 aa		13.51	□□□□□ -0.25
SPG7-222	ENST00000569820	N4BP1	O75113	896 aa	Known RBP	13.51	□□□□□ -0.25
SPG7-222	ENST00000569820	PFKFB1	P16118	471 aa		13.51	□□□□□ -0.25
SPG7-222	ENST00000569820	FUT2	Q10981	343 aa		13.51	□□□□□ -0.25
SPG7-222	ENST00000569820	AMOTL1	Q8IY63	956 aa		13.51	□□□□□ -0.25
SPG7-222	ENST00000569820	PDILT	Q8N807	584 aa		13.51	□□□□□ -0.25
SPG7-222	ENST00000569820	WASF1	Q92558	559 aa		13.51	□□□□□ -0.25
SPG7-222	ENST00000569820	PDGFD	Q9GZP0	370 aa	Predicted RBP	13.51	□□□□□ -0.25
SPG7-222	ENST00000569820	TMX4	Q9H1E5	349 aa	Predicted RBP	13.51	□□□□□ -0.25
SPG7-222	ENST00000569820	SAP30BP	Q9UHR5	308 aa	Known RBP	13.51	□□□□□ -0.25
SPG7-222	ENST00000569820	RAB21	Q9UL25	225 aa		13.51	□□□□□ -0.25
SPG7-222	ENST00000569820	C10orf71	Q711Q0	1435 aa		13.5	□□□□□ -0.25
SPG7-222	ENST00000569820	KIF3C	O14782	793 aa		13.5	□□□□□ -0.25
SPG7-222	ENST00000569820	DEXI	O95424	95 aa		13.5	□□□□□ -0.25
SPG7-222	ENST00000569820	NT5C2	P49902	561 aa		13.5	□□□□□ -0.25
SPG7-222	ENST00000569820	KARS	Q15046	597 aa	Known RBP	13.5	□□□□□ -0.25
SPG7-222	ENST00000569820	LRCH2	Q5VUJ6	765 aa		13.5	□□□□□ -0.25
SPG7-222	ENST00000569820	SLC44A5	Q8NCS7	719 aa		13.5	□□□□□ -0.25
SPG7-222	ENST00000569820	EYA3	Q99504	573 aa		13.5	□□□□□ -0.25
SPG7-222	ENST00000569820	MXD3	Q9BW11	206 aa		13.5	□□□□□ -0.25
SPG7-222	ENST00000569820	MYH8	P13535	1937 aa		13.5	□□□□□ -0.25
SPG7-222	ENST00000569820	CALM1	P0DP23	149 aa		13.5	□□□□□ -0.25
SPG7-222	ENST00000569820	CALM2	P0DP24	149 aa		13.5	□□□□□ -0.25
SPG7-222	ENST00000569820	CALM3	P0DP25	149 aa		13.5	□□□□□ -0.25
SPG7-222	ENST00000569820	TRIM29	Q14134	588 aa		13.5	□□□□□ -0.25
SPG7-222	ENST00000569820	MMS22L	Q6ZRQ5	1243 aa		13.5	□□□□□ -0.25
SPG7-222	ENST00000569820	CCDC82	Q8N4S0	544 aa		13.5	□□□□□ -0.25
SPG7-222	ENST00000569820	CEP112	Q8N8E3	955 aa		13.5	□□□□□ -0.25
SPG7-222	ENST00000569820	MSANTD4	Q8NCY6	345 aa		13.5	□□□□□ -0.25
SPG7-222	ENST00000569820	FAM71B	Q8TC56	605 aa		13.5	□□□□□ -0.25
SPG7-222	ENST00000569820	CCDC102A	Q96A19	550 aa		13.5	□□□□□ -0.25
SPG7-222	ENST00000569820	RNF26	Q9BY78	433 aa	Predicted RBP	13.5	□□□□□ -0.25
SPG7-222	ENST00000569820	IL17RB	Q9NRM6	502 aa		13.5	□□□□□ -0.25
SPG7-222	ENST00000569820	PUF60	Q9UHX1	559 aa	Known RBP	13.5	□□□□□ -0.25
SPG7-222	ENST00000569820	TUBE1	Q9UJT0	475 aa		13.5	□□□□□ -0.25
SPG7-222	ENST00000569820	L1RE1	Q9UN81	338 aa		13.5	□□□□□ -0.25
SPG7-222	ENST00000569820	WDHD1	O75717	1129 aa	Predicted RBP	13.49	□□□□□ -0.25
SPG7-222	ENST00000569820	PLEKHA8P1	O95397	391 aa		13.49	□□□□□ -0.25
SPG7-222	ENST00000569820	CP	P00450	1065 aa		13.49	□□□□□ -0.25
SPG7-222	ENST00000569820	CMA1	P23946	247 aa		13.49	□□□□□ -0.25
SPG7-222	ENST00000569820	TFAP4	Q01664	338 aa		13.49	□□□□□ -0.25
SPG7-222	ENST00000569820	TBX2	Q13207	712 aa	Predicted RBP	13.49	□□□□□ -0.25
SPG7-222	ENST00000569820	LRRC31	Q6UY01	552 aa		13.49	□□□□□ -0.25
SPG7-222	ENST00000569820	PNKP	Q96T60	521 aa		13.49	□□□□□ -0.25
SPG7-222	ENST00000569820	FANCL	Q9NW38	375 aa		13.49	□□□□□ -0.25
SPG7-222	ENST00000569820	TAOK2	Q9UL54	1235 aa		13.49	□□□□□ -0.25
SPG7-222	ENST00000569820	PSME4	Q14997	1843 aa		13.49	□□□□□ -0.25
SPG7-222	ENST00000569820	KIF13B	Q9NQT8	1826 aa		13.49	□□□□□ -0.25
SPG7-222	ENST00000569820		F8W031	263 aa	Predicted RBP	13.48	□□□□□ -0.25
SPG7-222	ENST00000569820	MMP1	P03956	469 aa		13.48	□□□□□ -0.25
SPG7-222	ENST00000569820	RASA1	P20936	1047 aa		13.48	□□□□□ -0.25
SPG7-222	ENST00000569820	DEFB132	Q7Z7B7	95 aa		13.48	□□□□□ -0.25
SPG7-222	ENST00000569820	EFCAB13	Q8IY85	973 aa		13.48	□□□□□ -0.25
SPG7-222	ENST00000569820	CNNM3	Q8NE01	707 aa		13.48	□□□□□ -0.25
SPG7-222	ENST00000569820	C7orf43	Q8WVR3	580 aa		13.48	□□□□□ -0.25
SPG7-222	ENST00000569820	DESI2	Q9BSY9	194 aa		13.48	□□□□□ -0.25
SPG7-222	ENST00000569820	DBNDD1	Q9H9R9	158 aa		13.48	□□□□□ -0.25
SPG7-222	ENST00000569820	ABCB6	Q9NP58	842 aa		13.48	□□□□□ -0.25
SPG7-222	ENST00000569820	INTS13	Q9NVM9	706 aa		13.48	□□□□□ -0.25
SPG7-222	ENST00000569820	TTF2	Q9UNY4	1162 aa	Known RBP	13.48	□□□□□ -0.25
SPG7-222	ENST00000569820	CLSTN1	O94985	981 aa		13.48	□□□□□ -0.25
SPG7-222	ENST00000569820	BAG6	P46379	1132 aa		13.48	□□□□□ -0.25
SPG7-222	ENST00000569820	ADK	P55263	362 aa	Known RBP	13.48	□□□□□ -0.25
SPG7-222	ENST00000569820	TUBB4B	P68371	445 aa		13.48	□□□□□ -0.25
SPG7-222	ENST00000569820	SEMA3F	Q13275	785 aa		13.48	□□□□□ -0.25
SPG7-222	ENST00000569820	NBPF9	Q3BBW0	867 aa		13.48	□□□□□ -0.25
SPG7-222	ENST00000569820	C16orf86	Q6ZW13	317 aa		13.48	□□□□□ -0.25
SPG7-222	ENST00000569820	TMTC3	Q6ZXV5	915 aa		13.48	□□□□□ -0.25
SPG7-222	ENST00000569820	TC2N	Q8N9U0	490 aa		13.48	□□□□□ -0.25
SPG7-222	ENST00000569820	CNKSR1	Q969H4	720 aa		13.48	□□□□□ -0.25
SPG7-222	ENST00000569820	SHISA4	Q96DD7	197 aa		13.48	□□□□□ -0.25
SPG7-222	ENST00000569820	ACBD3	Q9H3P7	528 aa		13.48	□□□□□ -0.25
SPG7-222	ENST00000569820	SUGCT	Q9HAC7	445 aa		13.48	□□□□□ -0.25
SPG7-222	ENST00000569820	MKNK2	Q9HBH9	465 aa		13.48	□□□□□ -0.25
SPG7-222	ENST00000569820	CNTNAP5	Q8WYK1	1306 aa		13.48	□□□□□ -0.25
SPG7-222	ENST00000569820	ANKRD65	E5RJM6	399 aa		13.47	□□□□□ -0.25
SPG7-222	ENST00000569820	CCDC175	P0C221	793 aa		13.47	□□□□□ -0.25
SPG7-222	ENST00000569820	SYK	P43405	635 aa		13.47	□□□□□ -0.25
SPG7-222	ENST00000569820	CASP8	Q14790	479 aa		13.47	□□□□□ -0.25
SPG7-222	ENST00000569820	E2F4	Q16254	413 aa		13.47	□□□□□ -0.25
SPG7-222	ENST00000569820	PKN1	Q16512	942 aa		13.47	□□□□□ -0.25
SPG7-222	ENST00000569820	ANO1	Q5XXA6	986 aa		13.47	□□□□□ -0.25
SPG7-222	ENST00000569820	SPECC1L	Q69YQ0	1117 aa		13.47	□□□□□ -0.25
SPG7-222	ENST00000569820	WWC2	Q6AWC2	1192 aa		13.47	□□□□□ -0.25
SPG7-222	ENST00000569820	PODN	Q7Z5L7	613 aa		13.47	□□□□□ -0.25
SPG7-222	ENST00000569820	ANKS1A	Q92625	1134 aa		13.47	□□□□□ -0.25
SPG7-222	ENST00000569820	GNL3	Q9BVP2	549 aa	Known RBP eCLIP	13.47	□□□□□ -0.25
SPG7-222	ENST00000569820	GBP3	Q9H0R5	595 aa		13.47	□□□□□ -0.25
SPG7-222	ENST00000569820	KCNQ5	Q9NR82	932 aa		13.47	□□□□□ -0.25
SPG7-222	ENST00000569820	CDC23	Q9UJX2	597 aa		13.47	□□□□□ -0.25
SPG7-222	ENST00000569820	KCNJ14	Q9UNX9	436 aa		13.47	□□□□□ -0.25
SPG7-222	ENST00000569820	PHACTR2	O75167	634 aa		13.47	□□□□□ -0.25
SPG7-222	ENST00000569820	PPFIA4	O75335	1185 aa		13.47	□□□□□ -0.25
SPG7-222	ENST00000569820	DGKH	Q86XP1	1220 aa		13.47	□□□□□ -0.25
SPG7-222	ENST00000569820	IRX2	Q9BZI1	471 aa	Predicted RBP	13.47	□□□□□ -0.25
SPG7-222	ENST00000569820	MRPL44	Q9H9J2	332 aa	Known RBP	13.47	□□□□□ -0.25
SPG7-222	ENST00000569820	TCP11L1	Q9NUJ3	509 aa		13.47	□□□□□ -0.25
SPG7-222	ENST00000569820	ZNF219	Q9P2Y4	722 aa	Predicted RBP	13.47	□□□□□ -0.25
SPG7-222	ENST00000569820	USP17L3	A6NCW0	530 aa		13.46	□□□□□ -0.25

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