RNA–Protein interactions for RNA: ENST00000564685.5

VAC14-206, Transcript of Vac14, PIKFYVE complex component, humanhuman

TSL 1 (best)

Gene VAC14, Length 892 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAC14-206ENST00000564685 RAPGEFL1Q9UHV5 662 aa17.46■□□□□ 0.39
VAC14-206ENST00000564685 ZBED9Q6R2W3 1325 aa17.46■□□□□ 0.38
VAC14-206ENST00000564685 MYH7P12883 1935 aa17.45■□□□□ 0.38
VAC14-206ENST00000564685 IL27Q8NEV9 243 aa17.45■□□□□ 0.38
VAC14-206ENST00000564685 HERVK_113Q902F9 699 aa17.45■□□□□ 0.38
VAC14-206ENST00000564685 HAUS7Q99871 368 aa17.45■□□□□ 0.38
VAC14-206ENST00000564685 MTIF3Q9H2K0 278 aaKnown RBP17.45■□□□□ 0.38
VAC14-206ENST00000564685 RAVER2Q9HCJ3 691 aaKnown RBP17.45■□□□□ 0.38
VAC14-206ENST00000564685 NYAP2Q9P242 653 aa17.45■□□□□ 0.38
VAC14-206ENST00000564685 CHD7Q9P2D1 2997 aa17.45■□□□□ 0.38
VAC14-206ENST00000564685 HMMRO75330 724 aa17.44■□□□□ 0.38
VAC14-206ENST00000564685 RASA1P20936 1047 aa17.44■□□□□ 0.38
VAC14-206ENST00000564685 DHX30Q7L2E3 1194 aaKnown RBP eCLIP17.44■□□□□ 0.38
VAC14-206ENST00000564685 ARMCX2Q7L311 632 aa17.44■□□□□ 0.38
VAC14-206ENST00000564685 KIFC2Q96AC6 838 aa17.44■□□□□ 0.38
VAC14-206ENST00000564685 FGD4Q96M96 766 aa17.44■□□□□ 0.38
VAC14-206ENST00000564685 UHRF1Q96T88 793 aaPredicted RBP17.44■□□□□ 0.38
VAC14-206ENST00000564685 NKX2-4Q9H2Z4 354 aa17.44■□□□□ 0.38
VAC14-206ENST00000564685 SLC28A3Q9HAS3 691 aa17.44■□□□□ 0.38
VAC14-206ENST00000564685 MKNK2Q9HBH9 465 aa17.44■□□□□ 0.38
VAC14-206ENST00000564685 CXXC1Q9P0U4 656 aaPredicted RBP17.44■□□□□ 0.38
VAC14-206ENST00000564685 ARPP21Q9UBL0 812 aaPredicted RBP17.44■□□□□ 0.38
VAC14-206ENST00000564685 FBXO40Q9UH90 709 aa17.44■□□□□ 0.38
VAC14-206ENST00000564685 GREB1LQ9C091 1923 aaPredicted RBP17.44■□□□□ 0.38
VAC14-206ENST00000564685 CTAGE5O15320 804 aa17.43■□□□□ 0.38
VAC14-206ENST00000564685 RAB11FIP3O75154 756 aa17.43■□□□□ 0.38
VAC14-206ENST00000564685 CD4P01730 458 aa17.43■□□□□ 0.38
VAC14-206ENST00000564685 FGBP02675 491 aa17.43■□□□□ 0.38
VAC14-206ENST00000564685 ZSCAN25Q6NSZ9 544 aa17.43■□□□□ 0.38
VAC14-206ENST00000564685 NOL8Q76FK4 1167 aaKnown RBP17.43■□□□□ 0.38
VAC14-206ENST00000564685 RPAP2Q8IXW5 612 aaPredicted RBP17.43■□□□□ 0.38
VAC14-206ENST00000564685 CCDC144CPQ8IYA2 1237 aa17.43■□□□□ 0.38
VAC14-206ENST00000564685 STK11IPQ8N1F8 1099 aa17.43■□□□□ 0.38
VAC14-206ENST00000564685 CHST13Q8NET6 341 aa17.43■□□□□ 0.38
VAC14-206ENST00000564685 PUS7LQ9H0K6 701 aaKnown RBP17.43■□□□□ 0.38
VAC14-206ENST00000564685 SLC38A10Q9HBR0 1119 aa17.43■□□□□ 0.38
VAC14-206ENST00000564685 CLIP2Q9UDT6 1046 aa17.43■□□□□ 0.38
VAC14-206ENST00000564685 GBF1Q92538 1859 aa17.42■□□□□ 0.38
VAC14-206ENST00000564685 BEX3Q00994 111 aa17.42■□□□□ 0.38
VAC14-206ENST00000564685 TSPYL2Q9H2G4 693 aaPredicted RBP17.42■□□□□ 0.38
VAC14-206ENST00000564685 HIPK3Q9H422 1215 aa17.42■□□□□ 0.38
VAC14-206ENST00000564685 FEM1BQ9UK73 627 aa17.42■□□□□ 0.38
VAC14-206ENST00000564685 YBX2Q9Y2T7 364 aaKnown RBP17.42■□□□□ 0.38
VAC14-206ENST00000564685 MYH4Q9Y623 1939 aa17.42■□□□□ 0.38
VAC14-206ENST00000564685 TCF20Q9UGU0 1960 aaKnown RBP17.42■□□□□ 0.38
VAC14-206ENST00000564685 MINDY4BA8MYZ0 360 aa17.41■□□□□ 0.38
VAC14-206ENST00000564685 NKX3-2P78367 333 aa17.41■□□□□ 0.38
VAC14-206ENST00000564685 TNFAIP2Q03169 654 aa17.41■□□□□ 0.38
VAC14-206ENST00000564685 SBK1Q52WX2 424 aa17.41■□□□□ 0.38
VAC14-206ENST00000564685 CXCL17Q6UXB2 119 aa17.41■□□□□ 0.38
VAC14-206ENST00000564685 OTOP2Q7RTS6 562 aa17.41■□□□□ 0.38
VAC14-206ENST00000564685 KATNBL1Q9H079 304 aa17.41■□□□□ 0.38
VAC14-206ENST00000564685 HOMER2Q9NSB8 354 aa17.41■□□□□ 0.38
VAC14-206ENST00000564685 CABYRO75952 493 aa17.4■□□□□ 0.38
VAC14-206ENST00000564685 OAZ1P54368 228 aa17.4■□□□□ 0.38
VAC14-206ENST00000564685 CNTN2Q02246 1040 aa17.4■□□□□ 0.38
VAC14-206ENST00000564685 SIRT2Q8IXJ6 389 aa17.4■□□□□ 0.38
VAC14-206ENST00000564685 SLC43A3Q8NBI5 491 aa17.4■□□□□ 0.38
VAC14-206ENST00000564685 STRBPQ96SI9 672 aaKnown RBP17.4■□□□□ 0.38
VAC14-206ENST00000564685 C11orf97A0A1B0GVM6 126 aaPredicted RBP17.39■□□□□ 0.37
VAC14-206ENST00000564685 CCL23P55773 120 aa17.39■□□□□ 0.37
VAC14-206ENST00000564685 ITGA7Q13683 1181 aa17.39■□□□□ 0.37
VAC14-206ENST00000564685 FSCN1Q16658 493 aaKnown RBP17.39■□□□□ 0.37
VAC14-206ENST00000564685 GIMAP6Q6P9H5 292 aa17.39■□□□□ 0.37
VAC14-206ENST00000564685 MKL1Q969V6 931 aa17.39■□□□□ 0.37
VAC14-206ENST00000564685 AP5M1Q9H0R1 490 aa17.39■□□□□ 0.37
VAC14-206ENST00000564685 SLC4A7Q9Y6M7 1214 aa17.39■□□□□ 0.37
VAC14-206ENST00000564685 ASTN1O14525 1302 aa17.39■□□□□ 0.37
VAC14-206ENST00000564685 UMODL1Q5DID0 1318 aa17.39■□□□□ 0.37
VAC14-206ENST00000564685 REV3LO60673 3130 aa17.38■□□□□ 0.37
VAC14-206ENST00000564685 PRRC2BQ5JSZ5 2229 aaKnown RBP17.38■□□□□ 0.37
VAC14-206ENST00000564685 IGKV6D-41A0A0C4DH26 115 aa17.38■□□□□ 0.37
VAC14-206ENST00000564685 GSG1L2A8MUP6 293 aa17.38■□□□□ 0.37
VAC14-206ENST00000564685 RABGGTBP53611 331 aa17.38■□□□□ 0.37
VAC14-206ENST00000564685 TLK2Q86UE8 772 aa17.38■□□□□ 0.37
VAC14-206ENST00000564685 RPUSD2Q8IZ73 545 aaKnown RBP17.38■□□□□ 0.37
VAC14-206ENST00000564685 ZNF444Q8N0Y2 327 aaPredicted RBP17.38■□□□□ 0.37
VAC14-206ENST00000564685 MICALL1Q8N3F8 863 aa17.38■□□□□ 0.37
VAC14-206ENST00000564685 FAM133AQ8N9E0 248 aa17.38■□□□□ 0.37
VAC14-206ENST00000564685 CEP95Q96GE4 821 aa17.38■□□□□ 0.37
VAC14-206ENST00000564685 NOC4LQ9BVI4 516 aaKnown RBP17.38■□□□□ 0.37
VAC14-206ENST00000564685 SEZ6LQ9BYH1 1024 aa17.38■□□□□ 0.37
VAC14-206ENST00000564685 TRPV6Q9H1D0 765 aa17.38■□□□□ 0.37
VAC14-206ENST00000564685 ACAD9Q9H845 621 aa17.38■□□□□ 0.37
VAC14-206ENST00000564685 GNEQ9Y223 722 aaKnown RBP17.38■□□□□ 0.37
VAC14-206ENST00000564685 XIRP2A4UGR9 3374 aa17.37■□□□□ 0.37
VAC14-206ENST00000564685 ASB14A6NK59 587 aa17.37■□□□□ 0.37
VAC14-206ENST00000564685 ZEB2O60315 1214 aa17.37■□□□□ 0.37
VAC14-206ENST00000564685 FDX1P10109 184 aa17.37■□□□□ 0.37
VAC14-206ENST00000564685 MS4A1P11836 297 aa17.37■□□□□ 0.37
VAC14-206ENST00000564685 PLA2G5P39877 138 aa17.37■□□□□ 0.37
VAC14-206ENST00000564685 PPP2R2DQ66LE6 453 aa17.37■□□□□ 0.37
VAC14-206ENST00000564685 LRRC47Q8N1G4 583 aaKnown RBP17.37■□□□□ 0.37
VAC14-206ENST00000564685 GMCL1P1Q8NEA9 526 aa17.37■□□□□ 0.37
VAC14-206ENST00000564685 FAM122AQ96E09 287 aa17.37■□□□□ 0.37
VAC14-206ENST00000564685 NECAB3Q96P71 396 aaPredicted RBP17.37■□□□□ 0.37
VAC14-206ENST00000564685 ZNF287Q9HBT7 754 aa17.37■□□□□ 0.37
VAC14-206ENST00000564685 MTMR4Q9NYA4 1195 aa17.37■□□□□ 0.37
VAC14-206ENST00000564685 ISY1Q9ULR0 285 aaKnown RBP17.37■□□□□ 0.37
VAC14-206ENST00000564685 SYNPO2Q9UMS6 1093 aa17.37■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 82.1 ms