RNA–Protein interactions for RNA: ENST00000562610.5

COMMD4-206, Transcript of COMM domain containing 4, humanhuman

TSL 3

Gene COMMD4, Length 850 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-206ENST00000562610 CCND3P30281 292 aaPredicted RBP18.9■□□□□ 0.62
COMMD4-206ENST00000562610 CYP2C19P33261 490 aa18.9■□□□□ 0.62
COMMD4-206ENST00000562610 GPATCH4Q5T3I0 446 aaKnown RBP18.9■□□□□ 0.62
COMMD4-206ENST00000562610 DDX11Q96FC9 970 aa18.9■□□□□ 0.62
COMMD4-206ENST00000562610 MAML3Q96JK9 1138 aa18.9■□□□□ 0.62
COMMD4-206ENST00000562610 AGBL1Q96MI9 1066 aa18.9■□□□□ 0.62
COMMD4-206ENST00000562610 FBXO40Q9UH90 709 aa18.9■□□□□ 0.62
COMMD4-206ENST00000562610 LRRC37A2A6NM11 1700 aa18.89■□□□□ 0.61
COMMD4-206ENST00000562610 IFIT3O14879 490 aaKnown RBP18.89■□□□□ 0.61
COMMD4-206ENST00000562610 SLC27A2O14975 620 aa18.89■□□□□ 0.61
COMMD4-206ENST00000562610 TFRCP02786 760 aaKnown RBP18.89■□□□□ 0.61
COMMD4-206ENST00000562610 ALAS1P13196 640 aa18.89■□□□□ 0.61
COMMD4-206ENST00000562610 SART3Q15020 963 aaKnown RBP18.89■□□□□ 0.61
COMMD4-206ENST00000562610 OLFML2BQ68BL8 750 aa18.89■□□□□ 0.61
COMMD4-206ENST00000562610 BTNL9Q6UXG8 535 aa18.89■□□□□ 0.61
COMMD4-206ENST00000562610 CHST3Q7LGC8 479 aa18.89■□□□□ 0.61
COMMD4-206ENST00000562610 ANKRD35Q8N283 1001 aa18.89■□□□□ 0.61
COMMD4-206ENST00000562610 CHST13Q8NET6 341 aa18.89■□□□□ 0.61
COMMD4-206ENST00000562610 ANKS1AQ92625 1134 aa18.89■□□□□ 0.61
COMMD4-206ENST00000562610 ACAD9Q9H845 621 aa18.89■□□□□ 0.61
COMMD4-206ENST00000562610 RNF146Q9NTX7 359 aa18.89■□□□□ 0.61
COMMD4-206ENST00000562610 CCPG1Q9ULG6 757 aa18.89■□□□□ 0.61
COMMD4-206ENST00000562610 ALPK3Q96L96 1907 aa18.89■□□□□ 0.61
COMMD4-206ENST00000562610 ZNF536O15090 1300 aa18.89■□□□□ 0.61
COMMD4-206ENST00000562610 CNGA1P29973 690 aa18.88■□□□□ 0.61
COMMD4-206ENST00000562610 SEC23AQ15436 765 aa18.88■□□□□ 0.61
COMMD4-206ENST00000562610 CREB3L3Q68CJ9 461 aa18.88■□□□□ 0.61
COMMD4-206ENST00000562610 RANBP17Q9H2T7 1088 aaKnown RBP18.88■□□□□ 0.61
COMMD4-206ENST00000562610 FARP2O94887 1054 aaPredicted RBP18.87■□□□□ 0.61
COMMD4-206ENST00000562610 ICAM1P05362 532 aa18.87■□□□□ 0.61
COMMD4-206ENST00000562610 PARP1P09874 1014 aaKnown RBP18.87■□□□□ 0.61
COMMD4-206ENST00000562610 TAL1P17542 331 aaPredicted RBP18.87■□□□□ 0.61
COMMD4-206ENST00000562610 MKI67P46013 3256 aaKnown RBP18.87■□□□□ 0.61
COMMD4-206ENST00000562610 WTAPQ15007 396 aa18.87■□□□□ 0.61
COMMD4-206ENST00000562610 ASPRV1Q53RT3 343 aa18.87■□□□□ 0.61
COMMD4-206ENST00000562610 TRERF1Q96PN7 1200 aa18.87■□□□□ 0.61
COMMD4-206ENST00000562610 CPVLQ9H3G5 476 aa18.87■□□□□ 0.61
COMMD4-206ENST00000562610 DHX16O60231 1041 aaKnown RBP18.86■□□□□ 0.61
COMMD4-206ENST00000562610 CYBAP13498 195 aa18.86■□□□□ 0.61
COMMD4-206ENST00000562610 ZNF792Q3KQV3 632 aa18.86■□□□□ 0.61
COMMD4-206ENST00000562610 TKFCQ3LXA3 575 aa18.86■□□□□ 0.61
COMMD4-206ENST00000562610 TMEM67Q5HYA8 995 aa18.86■□□□□ 0.61
COMMD4-206ENST00000562610 RNF20Q5VTR2 975 aa18.86■□□□□ 0.61
COMMD4-206ENST00000562610 MB21D2Q8IYB1 491 aaPredicted RBP18.86■□□□□ 0.61
COMMD4-206ENST00000562610 ANTXR2P58335 489 aa18.85■□□□□ 0.61
COMMD4-206ENST00000562610 NECTIN1Q15223 517 aa18.85■□□□□ 0.61
COMMD4-206ENST00000562610 UBA5Q9GZZ9 404 aa18.85■□□□□ 0.61
COMMD4-206ENST00000562610 CRISPLD2Q9H0B8 497 aa18.85■□□□□ 0.61
COMMD4-206ENST00000562610 BAZ2BQ9UIF8 2168 aaKnown RBP18.85■□□□□ 0.61
COMMD4-206ENST00000562610 PRC1O43663 620 aa18.84■□□□□ 0.61
COMMD4-206ENST00000562610 MUM1L1Q5H9M0 696 aa18.84■□□□□ 0.61
COMMD4-206ENST00000562610 DHX30Q7L2E3 1194 aaKnown RBP eCLIP18.84■□□□□ 0.61
COMMD4-206ENST00000562610 TRPV1Q8NER1 839 aa18.84■□□□□ 0.61
COMMD4-206ENST00000562610 TINF2Q9BSI4 451 aa18.84■□□□□ 0.61
COMMD4-206ENST00000562610 A1CFQ9NQ94 594 aaKnown RBP18.84■□□□□ 0.61
COMMD4-206ENST00000562610 DIS3Q9Y2L1 958 aaKnown RBP18.84■□□□□ 0.61
COMMD4-206ENST00000562610 PFASO15067 1338 aa18.83■□□□□ 0.61
COMMD4-206ENST00000562610 DNAJC25-GNG10A0A024R161 153 aa18.83■□□□□ 0.6
COMMD4-206ENST00000562610 IGHA2P01877 340 aa18.83■□□□□ 0.6
COMMD4-206ENST00000562610 CAPN2P17655 700 aa18.83■□□□□ 0.6
COMMD4-206ENST00000562610 MCM5P33992 734 aa18.83■□□□□ 0.6
COMMD4-206ENST00000562610 CDC37Q16543 378 aaPredicted RBP18.83■□□□□ 0.6
COMMD4-206ENST00000562610 PRAMEF19Q5SWL8 479 aa18.83■□□□□ 0.6
COMMD4-206ENST00000562610 NSMFQ6X4W1 530 aa18.83■□□□□ 0.6
COMMD4-206ENST00000562610 SENP2Q9HC62 589 aa18.83■□□□□ 0.6
COMMD4-206ENST00000562610 DDX20Q9UHI6 824 aaKnown RBP18.83■□□□□ 0.6
COMMD4-206ENST00000562610 WDR19Q8NEZ3 1342 aa18.82■□□□□ 0.6
COMMD4-206ENST00000562610 POTEB2H3BUK9 544 aa18.82■□□□□ 0.6
COMMD4-206ENST00000562610 MSCO60682 206 aa18.82■□□□□ 0.6
COMMD4-206ENST00000562610 USH1GQ495M9 461 aa18.82■□□□□ 0.6
COMMD4-206ENST00000562610 ADGRF4Q8IZF3 695 aa18.82■□□□□ 0.6
COMMD4-206ENST00000562610 STAG2Q8N3U4 1231 aa18.82■□□□□ 0.6
COMMD4-206ENST00000562610 ANKLE1Q8NAG6 615 aa18.82■□□□□ 0.6
COMMD4-206ENST00000562610 DIS3LQ8TF46 1054 aaKnown RBP18.82■□□□□ 0.6
COMMD4-206ENST00000562610 OGDHLQ9ULD0 1010 aa18.82■□□□□ 0.6
COMMD4-206ENST00000562610 CNPY2Q9Y2B0 182 aa18.82■□□□□ 0.6
COMMD4-206ENST00000562610 CNTN2Q02246 1040 aa18.81■□□□□ 0.6
COMMD4-206ENST00000562610 ANO1Q5XXA6 986 aa18.81■□□□□ 0.6
COMMD4-206ENST00000562610 LHX8Q68G74 356 aa18.81■□□□□ 0.6
COMMD4-206ENST00000562610 NFXL1Q6ZNB6 911 aa18.81■□□□□ 0.6
COMMD4-206ENST00000562610 CATIPQ7Z7H3 387 aa18.81■□□□□ 0.6
COMMD4-206ENST00000562610 PAWRQ96IZ0 340 aaKnown RBP18.81■□□□□ 0.6
COMMD4-206ENST00000562610 LY9Q9HBG7 655 aa18.81■□□□□ 0.6
COMMD4-206ENST00000562610 VAT1LQ9HCJ6 419 aa18.81■□□□□ 0.6
COMMD4-206ENST00000562610 PNMA2Q9UL42 364 aa18.81■□□□□ 0.6
COMMD4-206ENST00000562610 SYNGAP1Q96PV0 1343 aa18.8■□□□□ 0.6
COMMD4-206ENST00000562610 KLRF2D3W0D1 207 aa18.8■□□□□ 0.6
COMMD4-206ENST00000562610 NFIBO00712 420 aa18.8■□□□□ 0.6
COMMD4-206ENST00000562610 SEPT4O43236 478 aa18.8■□□□□ 0.6
COMMD4-206ENST00000562610 REC8O95072 547 aa18.8■□□□□ 0.6
COMMD4-206ENST00000562610 COL9A3Q14050 684 aaPredicted RBP18.8■□□□□ 0.6
COMMD4-206ENST00000562610 GRM4Q14833 912 aa18.8■□□□□ 0.6
COMMD4-206ENST00000562610 UBE2Q1Q7Z7E8 422 aa18.8■□□□□ 0.6
COMMD4-206ENST00000562610 ZNF467Q7Z7K2 595 aaPredicted RBP18.8■□□□□ 0.6
COMMD4-206ENST00000562610 MSL3Q8N5Y2 521 aaKnown RBP18.8■□□□□ 0.6
COMMD4-206ENST00000562610 IGDCC4Q8TDY8 1250 aa18.8■□□□□ 0.6
COMMD4-206ENST00000562610 NUP133Q8WUM0 1156 aa18.8■□□□□ 0.6
COMMD4-206ENST00000562610 TMEM87BQ96K49 555 aa18.8■□□□□ 0.6
COMMD4-206ENST00000562610 HTATIP2Q9BUP3 242 aa18.8■□□□□ 0.6
COMMD4-206ENST00000562610 GPHNQ9NQX3 736 aaPredicted RBP18.8■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms