RNA–Protein interactions for RNA: ENST00000561400.1

HERC1-214, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 2,215 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-214ENST00000561400 USP17L13C9JLJ4 530 aa13.47□□□□□ -0.25
HERC1-214ENST00000561400 USP17L11C9JVI0 530 aa13.47□□□□□ -0.25
HERC1-214ENST00000561400 USP17L18D6R9N7 530 aa13.47□□□□□ -0.25
HERC1-214ENST00000561400 USP17L22D6RA61 530 aa13.47□□□□□ -0.25
HERC1-214ENST00000561400 USP17L17D6RBQ6 530 aa13.47□□□□□ -0.25
HERC1-214ENST00000561400 USP17L19D6RCP7 530 aa13.47□□□□□ -0.25
HERC1-214ENST00000561400 USP17L20D6RJB6 530 aa13.47□□□□□ -0.25
HERC1-214ENST00000561400 IGF2BP3O00425 579 aaKnown RBP eCLIP13.47□□□□□ -0.25
HERC1-214ENST00000561400 USP17L24Q0WX57 530 aa13.47□□□□□ -0.25
HERC1-214ENST00000561400 FUT2Q10981 343 aa13.47□□□□□ -0.25
HERC1-214ENST00000561400 PPP2R5BQ15173 497 aa13.47□□□□□ -0.25
HERC1-214ENST00000561400 BTNL9Q6UXG8 535 aa13.47□□□□□ -0.25
HERC1-214ENST00000561400 TMTC3Q6ZXV5 915 aa13.47□□□□□ -0.25
HERC1-214ENST00000561400 CCDC83Q8IWF9 413 aa13.47□□□□□ -0.25
HERC1-214ENST00000561400 BANK1Q8NDB2 785 aa13.47□□□□□ -0.25
HERC1-214ENST00000561400 RBM28Q9NW13 759 aaKnown RBP13.47□□□□□ -0.25
HERC1-214ENST00000561400 WDR33Q9C0J8 1336 aaKnown RBP13.47□□□□□ -0.25
HERC1-214ENST00000561400 PPFIA3O75145 1194 aa13.47□□□□□ -0.25
HERC1-214ENST00000561400 FLOT1O75955 427 aa13.47□□□□□ -0.25
HERC1-214ENST00000561400 CTDNEP1O95476 244 aa13.47□□□□□ -0.25
HERC1-214ENST00000561400 FEM1BQ9UK73 627 aa13.47□□□□□ -0.25
HERC1-214ENST00000561400 CCDC196A0A1B0GTZ2 297 aa13.46□□□□□ -0.25
HERC1-214ENST00000561400 PDHXO00330 501 aa13.46□□□□□ -0.25
HERC1-214ENST00000561400 PLA2G6O60733 806 aa13.46□□□□□ -0.25
HERC1-214ENST00000561400 TM4SF4P48230 202 aa13.46□□□□□ -0.25
HERC1-214ENST00000561400 INHBEP58166 350 aa13.46□□□□□ -0.25
HERC1-214ENST00000561400 IKQ13123 557 aaPredicted RBP13.46□□□□□ -0.25
HERC1-214ENST00000561400 ANKRD23Q86SG2 305 aa13.46□□□□□ -0.25
HERC1-214ENST00000561400 HSCBQ8IWL3 235 aa13.46□□□□□ -0.25
HERC1-214ENST00000561400 ADGRF4Q8IZF3 695 aa13.46□□□□□ -0.25
HERC1-214ENST00000561400 CHURC1Q8WUH1 139 aa13.46□□□□□ -0.25
HERC1-214ENST00000561400 KIFC2Q96AC6 838 aa13.46□□□□□ -0.25
HERC1-214ENST00000561400 ASCC2Q9H1I8 757 aaPredicted RBP13.46□□□□□ -0.25
HERC1-214ENST00000561400 PRR12Q9ULL5 1215 aa13.46□□□□□ -0.25
HERC1-214ENST00000561400 OFD1O75665 1012 aa13.45□□□□□ -0.26
HERC1-214ENST00000561400 GNAQP50148 359 aa13.45□□□□□ -0.26
HERC1-214ENST00000561400 COG2Q14746 738 aa13.45□□□□□ -0.26
HERC1-214ENST00000561400 POTEEQ6S8J3 1075 aa13.45□□□□□ -0.26
HERC1-214ENST00000561400 PRPF38AQ8NAV1 312 aaKnown RBP13.45□□□□□ -0.26
HERC1-214ENST00000561400 PHKBQ93100 1093 aa13.45□□□□□ -0.26
HERC1-214ENST00000561400 SLF1Q9BQI6 1058 aa13.45□□□□□ -0.26
HERC1-214ENST00000561400 RIOX1Q9H6W3 641 aa13.45□□□□□ -0.26
HERC1-214ENST00000561400 VAT1LQ9HCJ6 419 aa13.45□□□□□ -0.26
HERC1-214ENST00000561400 CPLX1O14810 134 aa13.45□□□□□ -0.26
HERC1-214ENST00000561400 IFNAR1P17181 557 aa13.45□□□□□ -0.26
HERC1-214ENST00000561400 SREBF2Q12772 1141 aa13.45□□□□□ -0.26
HERC1-214ENST00000561400 SYDE2Q5VT97 1194 aa13.45□□□□□ -0.26
HERC1-214ENST00000561400 FAM160B2Q86V87 743 aa13.45□□□□□ -0.26
HERC1-214ENST00000561400 IFNL1Q8IU54 200 aa13.45□□□□□ -0.26
HERC1-214ENST00000561400 ATG4CQ96DT6 458 aa13.45□□□□□ -0.26
HERC1-214ENST00000561400 P2RX7Q99572 595 aaKnown RBP13.45□□□□□ -0.26
HERC1-214ENST00000561400 SPZ1Q9BXG8 430 aa13.45□□□□□ -0.26
HERC1-214ENST00000561400 JMJD4Q9H9V9 463 aa13.45□□□□□ -0.26
HERC1-214ENST00000561400 PPP1R9AQ9ULJ8 1098 aa13.45□□□□□ -0.26
HERC1-214ENST00000561400 CNTNAP5Q8WYK1 1306 aa13.45□□□□□ -0.26
HERC1-214ENST00000561400 hCG_1642624A0A1W2PR95 340 aa13.44□□□□□ -0.26
HERC1-214ENST00000561400 FSD2A1L4K1 749 aa13.44□□□□□ -0.26
HERC1-214ENST00000561400 SPDYE16A6NNV3 312 aaPredicted RBP13.44□□□□□ -0.26
HERC1-214ENST00000561400 CYP2C8P10632 490 aa13.44□□□□□ -0.26
HERC1-214ENST00000561400 SMARCA1P28370 1054 aa13.44□□□□□ -0.26
HERC1-214ENST00000561400 DSG3P32926 999 aa13.44□□□□□ -0.26
HERC1-214ENST00000561400 SNAP25P60880 206 aa13.44□□□□□ -0.26
HERC1-214ENST00000561400 PABPC4Q13310 644 aaKnown RBP eCLIP13.44□□□□□ -0.26
HERC1-214ENST00000561400 CUL4AQ13619 759 aa13.44□□□□□ -0.26
HERC1-214ENST00000561400 NSUN7Q8NE18 718 aaKnown RBP13.44□□□□□ -0.26
HERC1-214ENST00000561400 PIBF1Q8WXW3 757 aa13.44□□□□□ -0.26
HERC1-214ENST00000561400 LZTS2Q9BRK4 669 aa13.44□□□□□ -0.26
HERC1-214ENST00000561400 THSD7BQ9C0I4 1608 aa13.44□□□□□ -0.26
HERC1-214ENST00000561400 SLC45A1Q9Y2W3 748 aa13.44□□□□□ -0.26
HERC1-214ENST00000561400 A0A0G2JMZ2 1700 aa13.44□□□□□ -0.26
HERC1-214ENST00000561400 DHX16O60231 1041 aaKnown RBP13.44□□□□□ -0.26
HERC1-214ENST00000561400 JAK2O60674 1132 aa13.44□□□□□ -0.26
HERC1-214ENST00000561400 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.44□□□□□ -0.26
HERC1-214ENST00000561400 ADAMTS5Q9UNA0 930 aa13.44□□□□□ -0.26
HERC1-214ENST00000561400 PEX10O60683 326 aa13.43□□□□□ -0.26
HERC1-214ENST00000561400 MAP2K2P36507 400 aa13.43□□□□□ -0.26
HERC1-214ENST00000561400 HERVK_113P62684 666 aa13.43□□□□□ -0.26
HERC1-214ENST00000561400 MTMR8Q96EF0 704 aa13.43□□□□□ -0.26
HERC1-214ENST00000561400 PIGSQ96S52 555 aa13.43□□□□□ -0.26
HERC1-214ENST00000561400 HOXC10Q9NYD6 342 aa13.43□□□□□ -0.26
HERC1-214ENST00000561400 V9GY48 417 aaPredicted RBP13.43□□□□□ -0.26
HERC1-214ENST00000561400 MYPNQ86TC9 1320 aa13.43□□□□□ -0.26
HERC1-214ENST00000561400 VWA5AO00534 786 aa13.43□□□□□ -0.26
HERC1-214ENST00000561400 OSBPP22059 807 aa13.43□□□□□ -0.26
HERC1-214ENST00000561400 CPLX2Q6PUV4 134 aaKnown RBP13.43□□□□□ -0.26
HERC1-214ENST00000561400 EP400NLQ6ZTU2 488 aa13.43□□□□□ -0.26
HERC1-214ENST00000561400 HOMER1Q86YM7 354 aa13.43□□□□□ -0.26
HERC1-214ENST00000561400 SLC26A6Q9BXS9 759 aa13.43□□□□□ -0.26
HERC1-214ENST00000561400 PNMA3Q9UL41 463 aa13.43□□□□□ -0.26
HERC1-214ENST00000561400 PTPDC1A2A3K4 754 aa13.42□□□□□ -0.26
HERC1-214ENST00000561400 DYNC1I1O14576 645 aa13.42□□□□□ -0.26
HERC1-214ENST00000561400 FDPSP14324 419 aaKnown RBP13.42□□□□□ -0.26
HERC1-214ENST00000561400 RNF26Q9BY78 433 aaPredicted RBP13.42□□□□□ -0.26
HERC1-214ENST00000561400 RANBP17Q9H2T7 1088 aaKnown RBP13.42□□□□□ -0.26
HERC1-214ENST00000561400 SLC38A10Q9HBR0 1119 aa13.42□□□□□ -0.26
HERC1-214ENST00000561400 ZCCHC17Q9NP64 241 aaKnown RBP13.42□□□□□ -0.26
HERC1-214ENST00000561400 LOC102724159A0A0B4J2E5 919 aa13.41□□□□□ -0.26
HERC1-214ENST00000561400 FMNL1O95466 1100 aaPredicted RBP13.41□□□□□ -0.26
HERC1-214ENST00000561400 SLC4A3P48751 1232 aa13.41□□□□□ -0.26
HERC1-214ENST00000561400 SATB1Q01826 763 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms