RNA–Protein interactions for RNA: ENST00000560562.5

TNFAIP2-207, Transcript of TNF alpha induced protein 2, humanhuman

TSL 1 (best)

Gene TNFAIP2, Length 1,429 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP2-207ENST00000560562 IKQ13123 557 aaPredicted RBP16.53■□□□□ 0.24
TNFAIP2-207ENST00000560562 PPP4R3BQ5MIZ7 849 aa16.53■□□□□ 0.24
TNFAIP2-207ENST00000560562 CHURC1Q8WUH1 139 aa16.53■□□□□ 0.24
TNFAIP2-207ENST00000560562 ZKSCAN3Q9BRR0 538 aa16.53■□□□□ 0.24
TNFAIP2-207ENST00000560562 DSCC1Q9BVC3 393 aa16.53■□□□□ 0.24
TNFAIP2-207ENST00000560562 FRMPD2Q68DX3 1309 aaPredicted RBP16.52■□□□□ 0.24
TNFAIP2-207ENST00000560562 HIP1O00291 1037 aa16.52■□□□□ 0.23
TNFAIP2-207ENST00000560562 DNM1LO00429 736 aa16.52■□□□□ 0.23
TNFAIP2-207ENST00000560562 SNAI1O95863 264 aaPredicted RBP16.52■□□□□ 0.23
TNFAIP2-207ENST00000560562 SYN1P17600 705 aa16.52■□□□□ 0.23
TNFAIP2-207ENST00000560562 CCDC96Q2M329 555 aa16.52■□□□□ 0.23
TNFAIP2-207ENST00000560562 CCDC174Q6PII3 467 aa16.52■□□□□ 0.23
TNFAIP2-207ENST00000560562 DCAF4Q8WV16 495 aa16.52■□□□□ 0.23
TNFAIP2-207ENST00000560562 CTDP1Q9Y5B0 961 aaPredicted RBP16.52■□□□□ 0.23
TNFAIP2-207ENST00000560562 ASTN1O14525 1302 aa16.51■□□□□ 0.23
TNFAIP2-207ENST00000560562 ZNF213O14771 459 aa16.51■□□□□ 0.23
TNFAIP2-207ENST00000560562 PDHBP11177 359 aa16.51■□□□□ 0.23
TNFAIP2-207ENST00000560562 PCP11498 1178 aaKnown RBP16.51■□□□□ 0.23
TNFAIP2-207ENST00000560562 CNTN2Q02246 1040 aa16.51■□□□□ 0.23
TNFAIP2-207ENST00000560562 MUM1L1Q5H9M0 696 aa16.51■□□□□ 0.23
TNFAIP2-207ENST00000560562 MAMDC4Q6UXC1 1216 aa16.51■□□□□ 0.23
TNFAIP2-207ENST00000560562 BTNL9Q6UXG8 535 aa16.51■□□□□ 0.23
TNFAIP2-207ENST00000560562 CHST13Q8NET6 341 aa16.51■□□□□ 0.23
TNFAIP2-207ENST00000560562 DDX11Q96FC9 970 aa16.51■□□□□ 0.23
TNFAIP2-207ENST00000560562 SENP6Q9GZR1 1112 aaPredicted RBP16.51■□□□□ 0.23
TNFAIP2-207ENST00000560562 A1CFQ9NQ94 594 aaKnown RBP16.51■□□□□ 0.23
TNFAIP2-207ENST00000560562 RNF146Q9NTX7 359 aa16.51■□□□□ 0.23
TNFAIP2-207ENST00000560562 DDX49Q9Y6V7 483 aaKnown RBP16.51■□□□□ 0.23
TNFAIP2-207ENST00000560562 BAZ2BQ9UIF8 2168 aaKnown RBP16.51■□□□□ 0.23
TNFAIP2-207ENST00000560562 B4E1Z4 1266 aa16.5■□□□□ 0.23
TNFAIP2-207ENST00000560562 ADCY6O43306 1168 aa16.5■□□□□ 0.23
TNFAIP2-207ENST00000560562 KDM4AO75164 1064 aa16.5■□□□□ 0.23
TNFAIP2-207ENST00000560562 SNHG28P0DPA3 235 aa16.5■□□□□ 0.23
TNFAIP2-207ENST00000560562 FDX1P10109 184 aa16.5■□□□□ 0.23
TNFAIP2-207ENST00000560562 ATN1P54259 1190 aaPredicted RBP16.5■□□□□ 0.23
TNFAIP2-207ENST00000560562 LRRC41Q15345 812 aa16.5■□□□□ 0.23
TNFAIP2-207ENST00000560562 SKAP1Q86WV1 359 aa16.5■□□□□ 0.23
TNFAIP2-207ENST00000560562 ANKRD35Q8N283 1001 aa16.5■□□□□ 0.23
TNFAIP2-207ENST00000560562 RANBP17Q9H2T7 1088 aaKnown RBP16.5■□□□□ 0.23
TNFAIP2-207ENST00000560562 RNF41Q9H4P4 317 aaPredicted RBP16.5■□□□□ 0.23
TNFAIP2-207ENST00000560562 ACAD9Q9H845 621 aa16.5■□□□□ 0.23
TNFAIP2-207ENST00000560562 GPCPD1Q9NPB8 672 aa16.5■□□□□ 0.23
TNFAIP2-207ENST00000560562 NRBP1Q9UHY1 535 aa16.5■□□□□ 0.23
TNFAIP2-207ENST00000560562 SYNGAP1Q96PV0 1343 aa16.5■□□□□ 0.23
TNFAIP2-207ENST00000560562 ALAS1P13196 640 aa16.49■□□□□ 0.23
TNFAIP2-207ENST00000560562 CHMLP26374 656 aa16.49■□□□□ 0.23
TNFAIP2-207ENST00000560562 PTH1RQ03431 593 aa16.49■□□□□ 0.23
TNFAIP2-207ENST00000560562 FAM133AQ8N9E0 248 aa16.49■□□□□ 0.23
TNFAIP2-207ENST00000560562 ESR2Q92731 530 aa16.49■□□□□ 0.23
TNFAIP2-207ENST00000560562 GDF15Q99988 308 aa16.49■□□□□ 0.23
TNFAIP2-207ENST00000560562 KATNBL1Q9H079 304 aa16.49■□□□□ 0.23
TNFAIP2-207ENST00000560562 FBXO40Q9UH90 709 aa16.49■□□□□ 0.23
TNFAIP2-207ENST00000560562 TAF6LQ9Y6J9 622 aa16.49■□□□□ 0.23
TNFAIP2-207ENST00000560562 SOWAHBA6NEL2 793 aa16.48■□□□□ 0.23
TNFAIP2-207ENST00000560562 PGK1P00558 417 aa16.48■□□□□ 0.23
TNFAIP2-207ENST00000560562 MYCNP04198 464 aaPredicted RBP16.48■□□□□ 0.23
TNFAIP2-207ENST00000560562 IRX5P78411 483 aaPredicted RBP16.48■□□□□ 0.23
TNFAIP2-207ENST00000560562 ZNF543Q08ER8 600 aa16.48■□□□□ 0.23
TNFAIP2-207ENST00000560562 SYDE2Q5VT97 1194 aa16.48■□□□□ 0.23
TNFAIP2-207ENST00000560562 ZNF467Q7Z7K2 595 aaPredicted RBP16.48■□□□□ 0.23
TNFAIP2-207ENST00000560562 TTC14Q96N46 770 aa16.48■□□□□ 0.23
TNFAIP2-207ENST00000560562 TRERF1Q96PN7 1200 aa16.48■□□□□ 0.23
TNFAIP2-207ENST00000560562 PURBQ96QR8 312 aaKnown RBP16.48■□□□□ 0.23
TNFAIP2-207ENST00000560562 CPVLQ9H3G5 476 aa16.48■□□□□ 0.23
TNFAIP2-207ENST00000560562 XPNPEP3Q9NQH7 507 aa16.48■□□□□ 0.23
TNFAIP2-207ENST00000560562 PPP4R2Q9NY27 417 aa16.48■□□□□ 0.23
TNFAIP2-207ENST00000560562 ADAMTS4O75173 837 aa16.47■□□□□ 0.23
TNFAIP2-207ENST00000560562 ICAM1P05362 532 aa16.47■□□□□ 0.23
TNFAIP2-207ENST00000560562 ARMCX2Q7L311 632 aa16.47■□□□□ 0.23
TNFAIP2-207ENST00000560562 MSL3Q8N5Y2 521 aaKnown RBP16.47■□□□□ 0.23
TNFAIP2-207ENST00000560562 ENAHQ8N8S7 591 aaPredicted RBP16.47■□□□□ 0.23
TNFAIP2-207ENST00000560562 ARRDC4Q8NCT1 418 aa16.47■□□□□ 0.23
TNFAIP2-207ENST00000560562 CDKN2AIPQ9NXV6 580 aaPredicted RBP16.47■□□□□ 0.23
TNFAIP2-207ENST00000560562 ZSWIM5Q9P217 1185 aa16.47■□□□□ 0.23
TNFAIP2-207ENST00000560562 CCPG1Q9ULG6 757 aa16.47■□□□□ 0.23
TNFAIP2-207ENST00000560562 CNPY2Q9Y2B0 182 aa16.47■□□□□ 0.23
TNFAIP2-207ENST00000560562 RAD50Q92878 1312 aa16.47■□□□□ 0.23
TNFAIP2-207ENST00000560562 COL6A3P12111 3177 aa16.47■□□□□ 0.23
TNFAIP2-207ENST00000560562 MYADML2A6NDP7 307 aa16.46■□□□□ 0.23
TNFAIP2-207ENST00000560562 GOLGA8HP0CJ92 632 aa16.46■□□□□ 0.23
TNFAIP2-207ENST00000560562 RARBP10826 455 aa16.46■□□□□ 0.23
TNFAIP2-207ENST00000560562 AKR1A1P14550 325 aa16.46■□□□□ 0.23
TNFAIP2-207ENST00000560562 ADCYAP1R1P41586 468 aa16.46■□□□□ 0.23
TNFAIP2-207ENST00000560562 MAGEA10P43363 369 aaPredicted RBP16.46■□□□□ 0.23
TNFAIP2-207ENST00000560562 IMMTQ16891 758 aaKnown RBP16.46■□□□□ 0.23
TNFAIP2-207ENST00000560562 TKFCQ3LXA3 575 aa16.46■□□□□ 0.23
TNFAIP2-207ENST00000560562 CCDC144CPQ8IYA2 1237 aa16.46■□□□□ 0.23
TNFAIP2-207ENST00000560562 FERMT2Q96AC1 680 aa16.46■□□□□ 0.23
TNFAIP2-207ENST00000560562 CYP39A1Q9NYL5 469 aa16.46■□□□□ 0.23
TNFAIP2-207ENST00000560562 ZHX1Q9UKY1 873 aaPredicted RBP16.46■□□□□ 0.23
TNFAIP2-207ENST00000560562 SYNRGQ9UMZ2 1314 aa16.46■□□□□ 0.23
TNFAIP2-207ENST00000560562 KBTBD13C9JR72 458 aa16.45■□□□□ 0.22
TNFAIP2-207ENST00000560562 POTEB2H3BUK9 544 aa16.45■□□□□ 0.22
TNFAIP2-207ENST00000560562 NFIBO00712 420 aa16.45■□□□□ 0.22
TNFAIP2-207ENST00000560562 PTGS1P23219 599 aa16.45■□□□□ 0.22
TNFAIP2-207ENST00000560562 RTP1P59025 263 aa16.45■□□□□ 0.22
TNFAIP2-207ENST00000560562 ACVR2BQ13705 512 aa16.45■□□□□ 0.22
TNFAIP2-207ENST00000560562 SNX17Q15036 470 aa16.45■□□□□ 0.22
TNFAIP2-207ENST00000560562 CYB5R4Q7L1T6 521 aa16.45■□□□□ 0.22
TNFAIP2-207ENST00000560562 DGKHQ86XP1 1220 aa16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms