RNA–Protein interactions for RNA: ENST00000559373.1

TSPAN3-206, Transcript of tetraspanin 3, humanhuman

TSL 3

Gene TSPAN3, Length 393 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-206ENST00000559373 A0A1W2PQY0 241 aa24.28■■□□□ 1.48
TSPAN3-206ENST00000559373 TRIM43BA6NCK2 446 aa24.28■■□□□ 1.48
TSPAN3-206ENST00000559373 MYADML2A6NDP7 307 aa24.28■■□□□ 1.48
TSPAN3-206ENST00000559373 FGAP02671 866 aa24.28■■□□□ 1.48
TSPAN3-206ENST00000559373 SNX17Q15036 470 aa24.28■■□□□ 1.48
TSPAN3-206ENST00000559373 STAG1Q8WVM7 1258 aa24.28■■□□□ 1.48
TSPAN3-206ENST00000559373 TRIM43Q96BQ3 446 aaPredicted RBP24.28■■□□□ 1.48
TSPAN3-206ENST00000559373 HELLSQ9NRZ9 838 aa24.28■■□□□ 1.48
TSPAN3-206ENST00000559373 CDKN2AIPQ9NXV6 580 aaPredicted RBP24.28■■□□□ 1.48
TSPAN3-206ENST00000559373 SYNGAP1Q96PV0 1343 aa24.28■■□□□ 1.48
TSPAN3-206ENST00000559373 SYNRGQ9UMZ2 1314 aa24.28■■□□□ 1.48
TSPAN3-206ENST00000559373 LAMA4Q16363 1823 aa24.28■■□□□ 1.48
TSPAN3-206ENST00000559373 ADAMTS4O75173 837 aa24.27■■□□□ 1.48
TSPAN3-206ENST00000559373 IGHDP01880 384 aa24.27■■□□□ 1.48
TSPAN3-206ENST00000559373 ALAS1P13196 640 aa24.27■■□□□ 1.48
TSPAN3-206ENST00000559373 ACVR2BQ13705 512 aa24.27■■□□□ 1.48
TSPAN3-206ENST00000559373 MCMDC2Q4G0Z9 681 aa24.27■■□□□ 1.48
TSPAN3-206ENST00000559373 MAMDC4Q6UXC1 1216 aa24.27■■□□□ 1.48
TSPAN3-206ENST00000559373 CHST13Q8NET6 341 aa24.27■■□□□ 1.48
TSPAN3-206ENST00000559373 CHURC1Q8WUH1 139 aa24.27■■□□□ 1.48
TSPAN3-206ENST00000559373 FAM184BQ9ULE4 1060 aa24.27■■□□□ 1.48
TSPAN3-206ENST00000559373 SYNPO2Q9UMS6 1093 aa24.27■■□□□ 1.48
TSPAN3-206ENST00000559373 PQBP1O60828 265 aaKnown RBP24.26■■□□□ 1.47
TSPAN3-206ENST00000559373 ITGB8P26012 769 aa24.26■■□□□ 1.47
TSPAN3-206ENST00000559373 SHHQ15465 462 aa24.26■■□□□ 1.47
TSPAN3-206ENST00000559373 CCDC96Q2M329 555 aa24.26■■□□□ 1.47
TSPAN3-206ENST00000559373 C9orf50Q5SZB4 431 aa24.26■■□□□ 1.47
TSPAN3-206ENST00000559373 TTBK2Q6IQ55 1244 aa24.26■■□□□ 1.47
TSPAN3-206ENST00000559373 RCSD1Q6JBY9 416 aa24.26■■□□□ 1.47
TSPAN3-206ENST00000559373 CCDC144CPQ8IYA2 1237 aa24.26■■□□□ 1.47
TSPAN3-206ENST00000559373 EXOC6Q8TAG9 804 aa24.26■■□□□ 1.47
TSPAN3-206ENST00000559373 GMCL1Q96IK5 515 aa24.26■■□□□ 1.47
TSPAN3-206ENST00000559373 FAM161BQ96MY7 647 aa24.26■■□□□ 1.47
TSPAN3-206ENST00000559373 RNF146Q9NTX7 359 aa24.26■■□□□ 1.47
TSPAN3-206ENST00000559373 ANAPC4Q9UJX5 808 aa24.26■■□□□ 1.47
TSPAN3-206ENST00000559373 HSPD1P10809 573 aaKnown RBP24.25■■□□□ 1.47
TSPAN3-206ENST00000559373 SLC16A2P36021 539 aa24.25■■□□□ 1.47
TSPAN3-206ENST00000559373 KCNA10Q16322 511 aa24.25■■□□□ 1.47
TSPAN3-206ENST00000559373 CCDC144BQ3MJ40 725 aa24.25■■□□□ 1.47
TSPAN3-206ENST00000559373 MUM1L1Q5H9M0 696 aa24.25■■□□□ 1.47
TSPAN3-206ENST00000559373 ARMCX2Q7L311 632 aa24.25■■□□□ 1.47
TSPAN3-206ENST00000559373 FAM160B2Q86V87 743 aa24.25■■□□□ 1.47
TSPAN3-206ENST00000559373 TRERF1Q96PN7 1200 aa24.25■■□□□ 1.47
TSPAN3-206ENST00000559373 FBXO40Q9UH90 709 aa24.25■■□□□ 1.47
TSPAN3-206ENST00000559373 PRR12Q9ULL5 1215 aa24.25■■□□□ 1.47
TSPAN3-206ENST00000559373 PTGS1P23219 599 aa24.24■■□□□ 1.47
TSPAN3-206ENST00000559373 ACLYP53396 1101 aa24.24■■□□□ 1.47
TSPAN3-206ENST00000559373 OAZ1P54368 228 aa24.24■■□□□ 1.47
TSPAN3-206ENST00000559373 ALX1Q15699 326 aa24.24■■□□□ 1.47
TSPAN3-206ENST00000559373 MSL3Q8N5Y2 521 aaKnown RBP24.24■■□□□ 1.47
TSPAN3-206ENST00000559373 PURBQ96QR8 312 aaKnown RBP24.24■■□□□ 1.47
TSPAN3-206ENST00000559373 ACAD9Q9H845 621 aa24.24■■□□□ 1.47
TSPAN3-206ENST00000559373 A1CFQ9NQ94 594 aaKnown RBP24.24■■□□□ 1.47
TSPAN3-206ENST00000559373 FRMPD2Q68DX3 1309 aaPredicted RBP24.24■■□□□ 1.47
TSPAN3-206ENST00000559373 SOWAHBA6NEL2 793 aa24.23■■□□□ 1.47
TSPAN3-206ENST00000559373 POTEB2H3BUK9 544 aa24.23■■□□□ 1.47
TSPAN3-206ENST00000559373 C6orf222P0C671 652 aaPredicted RBP24.23■■□□□ 1.47
TSPAN3-206ENST00000559373 ZNF467Q7Z7K2 595 aaPredicted RBP24.23■■□□□ 1.47
TSPAN3-206ENST00000559373 GPCPD1Q9NPB8 672 aa24.23■■□□□ 1.47
TSPAN3-206ENST00000559373 MTMR10Q9NXD2 777 aa24.23■■□□□ 1.47
TSPAN3-206ENST00000559373 C11orf97A0A1B0GVM6 126 aaPredicted RBP24.22■■□□□ 1.47
TSPAN3-206ENST00000559373 ORC4O43929 436 aa24.22■■□□□ 1.47
TSPAN3-206ENST00000559373 CLTBP09497 229 aa24.22■■□□□ 1.47
TSPAN3-206ENST00000559373 DHX30Q7L2E3 1194 aaKnown RBP eCLIP24.22■■□□□ 1.47
TSPAN3-206ENST00000559373 SMC5Q8IY18 1101 aa24.22■■□□□ 1.47
TSPAN3-206ENST00000559373 SLC17A8Q8NDX2 589 aa24.22■■□□□ 1.47
TSPAN3-206ENST00000559373 KLHDC9Q8NEP7 349 aa24.22■■□□□ 1.47
TSPAN3-206ENST00000559373 ABHD16BQ9H3Z7 469 aa24.22■■□□□ 1.47
TSPAN3-206ENST00000559373 STARD7Q9NQZ5 370 aa24.22■■□□□ 1.47
TSPAN3-206ENST00000559373 ASTN1O14525 1302 aa24.21■■□□□ 1.47
TSPAN3-206ENST00000559373 CCDC171Q6TFL3 1326 aa24.21■■□□□ 1.47
TSPAN3-206ENST00000559373 DUSP11O75319 330 aaKnown RBP24.21■■□□□ 1.47
TSPAN3-206ENST00000559373 C1orf53Q5VUE5 145 aa24.21■■□□□ 1.47
TSPAN3-206ENST00000559373 GPR153Q6NV75 609 aa24.21■■□□□ 1.47
TSPAN3-206ENST00000559373 EEPD1Q7L9B9 569 aa24.21■■□□□ 1.47
TSPAN3-206ENST00000559373 PLEKHM2Q8IWE5 1019 aa24.21■■□□□ 1.47
TSPAN3-206ENST00000559373 FAM133AQ8N9E0 248 aa24.21■■□□□ 1.47
TSPAN3-206ENST00000559373 VTI1AQ96AJ9 217 aa24.21■■□□□ 1.47
TSPAN3-206ENST00000559373 TMEM47Q9BQJ4 181 aa24.21■■□□□ 1.47
TSPAN3-206ENST00000559373 RWDD1Q9H446 243 aaPredicted RBP24.21■■□□□ 1.47
TSPAN3-206ENST00000559373 FGRP09769 529 aa24.2■■□□□ 1.46
TSPAN3-206ENST00000559373 FDX1P10109 184 aa24.2■■□□□ 1.46
TSPAN3-206ENST00000559373 CCSAPQ6IQ19 270 aaPredicted RBP24.2■■□□□ 1.46
TSPAN3-206ENST00000559373 NOL8Q76FK4 1167 aaKnown RBP24.2■■□□□ 1.46
TSPAN3-206ENST00000559373 CHD1LQ86WJ1 897 aa24.2■■□□□ 1.46
TSPAN3-206ENST00000559373 ZKSCAN3Q9BRR0 538 aa24.2■■□□□ 1.46
TSPAN3-206ENST00000559373 KATNBL1Q9H079 304 aa24.2■■□□□ 1.46
TSPAN3-206ENST00000559373 CCPG1Q9ULG6 757 aa24.2■■□□□ 1.46
TSPAN3-206ENST00000559373 A0A0C4DFX4 3053 aa24.2■■□□□ 1.46
TSPAN3-206ENST00000559373 EYSQ5T1H1 3165 aa24.19■■□□□ 1.46
TSPAN3-206ENST00000559373 MYO9BQ13459 2157 aa24.19■■□□□ 1.46
TSPAN3-206ENST00000559373 ASGR1P07306 291 aa24.19■■□□□ 1.46
TSPAN3-206ENST00000559373 SDSP20132 328 aa24.19■■□□□ 1.46
TSPAN3-206ENST00000559373 EPHB4P54760 987 aa24.19■■□□□ 1.46
TSPAN3-206ENST00000559373 BEX3Q00994 111 aa24.19■■□□□ 1.46
TSPAN3-206ENST00000559373 PPP4R3BQ5MIZ7 849 aa24.19■■□□□ 1.46
TSPAN3-206ENST00000559373 TMEM63BQ5T3F8 832 aa24.19■■□□□ 1.46
TSPAN3-206ENST00000559373 NSMFQ6X4W1 530 aa24.19■■□□□ 1.46
TSPAN3-206ENST00000559373 TBC1D10CQ8IV04 446 aa24.19■■□□□ 1.46
TSPAN3-206ENST00000559373 TSEN34Q9BSV6 310 aaKnown RBP24.19■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms