RNA–Protein interactions for RNA: ENST00000558234.1

RORA-207, Transcript of RAR related orphan receptor A, humanhuman

TSL 1 (best)

Gene RORA, Length 3,910 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RORA-207ENST00000558234 HSP90AA1P07900 732 aaKnown RBP13.3□□□□□ -0.28
RORA-207ENST00000558234 SPICE1Q8N0Z3 855 aa13.3□□□□□ -0.28
RORA-207ENST00000558234 GTF3C2Q8WUA4 911 aaPredicted RBP13.3□□□□□ -0.28
RORA-207ENST00000558234 SLF1Q9BQI6 1058 aa13.3□□□□□ -0.28
RORA-207ENST00000558234 FBXO18Q8NFZ0 1043 aa13.3□□□□□ -0.28
RORA-207ENST00000558234 TOMM22Q9NS69 142 aa13.3□□□□□ -0.28
RORA-207ENST00000558234 FRMPD2Q68DX3 1309 aaPredicted RBP13.3□□□□□ -0.28
RORA-207ENST00000558234 U2AF2P26368 475 aaKnown RBP eCLIP13.3□□□□□ -0.28
RORA-207ENST00000558234 STAT2P52630 851 aa13.3□□□□□ -0.28
RORA-207ENST00000558234 HERVK_113P62684 666 aa13.3□□□□□ -0.28
RORA-207ENST00000558234 LARP1BQ659C4 914 aaKnown RBP13.3□□□□□ -0.28
RORA-207ENST00000558234 CLEC4DQ8WXI8 215 aa13.3□□□□□ -0.28
RORA-207ENST00000558234 USP6NLQ92738 828 aa13.3□□□□□ -0.28
RORA-207ENST00000558234 GBP4Q96PP9 640 aa13.3□□□□□ -0.28
RORA-207ENST00000558234 RNF186Q9NXI6 227 aa13.3□□□□□ -0.28
RORA-207ENST00000558234 PRPF3O43395 683 aaKnown RBP13.29□□□□□ -0.28
RORA-207ENST00000558234 CA12O43570 354 aa13.29□□□□□ -0.28
RORA-207ENST00000558234 PARP1P09874 1014 aaKnown RBP13.29□□□□□ -0.28
RORA-207ENST00000558234 FDX1P10109 184 aa13.29□□□□□ -0.28
RORA-207ENST00000558234 PDCP20941 246 aa13.29□□□□□ -0.28
RORA-207ENST00000558234 COG2Q14746 738 aa13.29□□□□□ -0.28
RORA-207ENST00000558234 KLHL40Q2TBA0 621 aa13.29□□□□□ -0.28
RORA-207ENST00000558234 SYDE2Q5VT97 1194 aa13.29□□□□□ -0.28
RORA-207ENST00000558234 FAM177A1Q8N128 213 aaPredicted RBP13.29□□□□□ -0.28
RORA-207ENST00000558234 MORC2Q9Y6X9 1032 aaPredicted RBP13.29□□□□□ -0.28
RORA-207ENST00000558234 TLR2O60603 784 aa13.29□□□□□ -0.28
RORA-207ENST00000558234 METAP2P50579 478 aaKnown RBP eCLIP13.29□□□□□ -0.28
RORA-207ENST00000558234 TNFRSF25Q93038 417 aa13.29□□□□□ -0.28
RORA-207ENST00000558234 DOCK3Q8IZD9 2030 aa13.29□□□□□ -0.28
RORA-207ENST00000558234 ERICH2A1L162 156 aa13.29□□□□□ -0.28
RORA-207ENST00000558234 CCDC69A6NI79 296 aa13.29□□□□□ -0.28
RORA-207ENST00000558234 KIF28PB7ZC32 967 aa13.29□□□□□ -0.28
RORA-207ENST00000558234 KLRF2D3W0D1 207 aa13.29□□□□□ -0.28
RORA-207ENST00000558234 GOLGA8HP0CJ92 632 aa13.29□□□□□ -0.28
RORA-207ENST00000558234 SLC1A4P43007 532 aa13.29□□□□□ -0.28
RORA-207ENST00000558234 NBR1Q14596 966 aa13.29□□□□□ -0.28
RORA-207ENST00000558234 MB21D1Q8N884 522 aa13.29□□□□□ -0.28
RORA-207ENST00000558234 PRPF38AQ8NAV1 312 aaKnown RBP13.29□□□□□ -0.28
RORA-207ENST00000558234 ATG4CQ96DT6 458 aa13.29□□□□□ -0.28
RORA-207ENST00000558234 RNF26Q9BY78 433 aaPredicted RBP13.29□□□□□ -0.28
RORA-207ENST00000558234 TMOD4Q9NZQ9 345 aa13.29□□□□□ -0.28
RORA-207ENST00000558234 CLK2P49760 499 aaKnown RBP13.28□□□□□ -0.28
RORA-207ENST00000558234 CRHR2Q13324 411 aa13.28□□□□□ -0.28
RORA-207ENST00000558234 TYW1BQ6NUM6 668 aa13.28□□□□□ -0.28
RORA-207ENST00000558234 TEX2Q8IWB9 1127 aa13.28□□□□□ -0.28
RORA-207ENST00000558234 ICAM1P05362 532 aa13.28□□□□□ -0.28
RORA-207ENST00000558234 RXRAP19793 462 aa13.28□□□□□ -0.28
RORA-207ENST00000558234 SHCBP1Q8NEM2 672 aa13.28□□□□□ -0.28
RORA-207ENST00000558234 CHMP4CQ96CF2 233 aa13.28□□□□□ -0.28
RORA-207ENST00000558234 FGD4Q96M96 766 aa13.28□□□□□ -0.28
RORA-207ENST00000558234 ZYXQ15942 572 aaKnown RBP13.28□□□□□ -0.28
RORA-207ENST00000558234 RTN1Q16799 776 aa13.28□□□□□ -0.28
RORA-207ENST00000558234 CPVLQ9H3G5 476 aa13.28□□□□□ -0.28
RORA-207ENST00000558234 FSD2A1L4K1 749 aa13.27□□□□□ -0.28
RORA-207ENST00000558234 TMEM232C9JQI7 657 aa13.27□□□□□ -0.28
RORA-207ENST00000558234 ADAMTS3O15072 1205 aa13.27□□□□□ -0.28
RORA-207ENST00000558234 TRAK2O60296 914 aa13.27□□□□□ -0.28
RORA-207ENST00000558234 CYP2C8P10632 490 aa13.27□□□□□ -0.28
RORA-207ENST00000558234 PFKFB3Q16875 520 aaPredicted RBP13.27□□□□□ -0.28
RORA-207ENST00000558234 Q3C1V9 767 aa13.27□□□□□ -0.28
RORA-207ENST00000558234 RIOX2Q8IUF8 465 aa13.27□□□□□ -0.28
RORA-207ENST00000558234 FAM110CQ1W6H9 321 aa13.27□□□□□ -0.29
RORA-207ENST00000558234 GADL1Q6ZQY3 521 aa13.27□□□□□ -0.29
RORA-207ENST00000558234 MICU3Q86XE3 530 aa13.27□□□□□ -0.29
RORA-207ENST00000558234 CRYGNQ8WXF5 182 aa13.27□□□□□ -0.29
RORA-207ENST00000558234 AIFM3Q96NN9 605 aa13.27□□□□□ -0.29
RORA-207ENST00000558234 ZSCAN16Q9H4T2 348 aaPredicted RBP13.27□□□□□ -0.29
RORA-207ENST00000558234 CNPY2Q9Y2B0 182 aa13.27□□□□□ -0.29
RORA-207ENST00000558234 RABGAP1Q9Y3P9 1069 aa13.27□□□□□ -0.29
RORA-207ENST00000558234 BAZ2BQ9UIF8 2168 aaKnown RBP13.27□□□□□ -0.29
RORA-207ENST00000558234 DNAJC25-GNG10A0A024R161 153 aa13.27□□□□□ -0.29
RORA-207ENST00000558234 STXBP3O00186 592 aa13.27□□□□□ -0.29
RORA-207ENST00000558234 ALDH1A1P00352 501 aa13.27□□□□□ -0.29
RORA-207ENST00000558234 MKRN3Q13064 507 aaKnown RBP13.27□□□□□ -0.29
RORA-207ENST00000558234 PARK7Q99497 189 aaKnown RBP13.27□□□□□ -0.29
RORA-207ENST00000558234 GJB4Q9NTQ9 266 aa13.27□□□□□ -0.29
RORA-207ENST00000558234 ASTN1O14525 1302 aa13.27□□□□□ -0.29
RORA-207ENST00000558234 GOLGA8AA7E2F4 631 aa13.26□□□□□ -0.29
RORA-207ENST00000558234 ZBTB5O15062 677 aa13.26□□□□□ -0.29
RORA-207ENST00000558234 PTMSP20962 102 aa13.26□□□□□ -0.29
RORA-207ENST00000558234 GCLCP48506 637 aaPredicted RBP13.26□□□□□ -0.29
RORA-207ENST00000558234 HOXC10Q9NYD6 342 aa13.26□□□□□ -0.29
RORA-207ENST00000558234 RIPK3Q9Y572 518 aa13.26□□□□□ -0.29
RORA-207ENST00000558234 EDIL3O43854 480 aa13.26□□□□□ -0.29
RORA-207ENST00000558234 DHX16O60231 1041 aaKnown RBP13.26□□□□□ -0.29
RORA-207ENST00000558234 GADD45BO75293 160 aaPredicted RBP13.26□□□□□ -0.29
RORA-207ENST00000558234 KIF5BP33176 963 aa13.26□□□□□ -0.29
RORA-207ENST00000558234 SLC16A2P36021 539 aa13.26□□□□□ -0.29
RORA-207ENST00000558234 DNM1Q05193 864 aaKnown RBP13.26□□□□□ -0.29
RORA-207ENST00000558234 FEZ1Q99689 392 aa13.26□□□□□ -0.29
RORA-207ENST00000558234 PNMA3Q9UL41 463 aa13.26□□□□□ -0.29
RORA-207ENST00000558234 GNAQP50148 359 aa13.26□□□□□ -0.29
RORA-207ENST00000558234 PABPC4Q13310 644 aaKnown RBP eCLIP13.26□□□□□ -0.29
RORA-207ENST00000558234 MCTP1Q6DN14 999 aa13.26□□□□□ -0.29
RORA-207ENST00000558234 CHURC1Q8WUH1 139 aa13.26□□□□□ -0.29
RORA-207ENST00000558234 PNMA6FA0A0J9YX94 578 aa13.25□□□□□ -0.29
RORA-207ENST00000558234 ESYT2A0FGR8 921 aa13.25□□□□□ -0.29
RORA-207ENST00000558234 hCG_1984214I3L0E3 225 aa13.25□□□□□ -0.29
RORA-207ENST00000558234 PEX10O60683 326 aa13.25□□□□□ -0.29
RORA-207ENST00000558234 HSD17B4P51659 736 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms