RNA–Protein interactions for RNA: ENST00000555746.5

SRP54-209, Transcript of signal recognition particle 54, humanhuman

TSL 4

Gene SRP54, Length 558 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-209ENST00000555746 ENPP3O14638 875 aa5□□□□□ -1.61
SRP54-209ENST00000555746 ZNF205O95201 554 aa5□□□□□ -1.61
SRP54-209ENST00000555746 MED26O95402 600 aa5□□□□□ -1.61
SRP54-209ENST00000555746 FGFR1P11362 822 aa5□□□□□ -1.61
SRP54-209ENST00000555746 AMPD2Q01433 879 aa5□□□□□ -1.61
SRP54-209ENST00000555746 CWF19L1Q69YN2 538 aaKnown RBP5□□□□□ -1.61
SRP54-209ENST00000555746 CRTC3Q6UUV7 619 aa5□□□□□ -1.61
SRP54-209ENST00000555746 RNF111Q6ZNA4 994 aa5□□□□□ -1.61
SRP54-209ENST00000555746 NLGN1Q8N2Q7 840 aa5□□□□□ -1.61
SRP54-209ENST00000555746 BCL7CQ8WUZ0 217 aaPredicted RBP5□□□□□ -1.61
SRP54-209ENST00000555746 CCDC140Q96MF4 163 aa5□□□□□ -1.61
SRP54-209ENST00000555746 ZDHHC15Q96MV8 337 aa5□□□□□ -1.61
SRP54-209ENST00000555746 AARSD1Q9BTE6 412 aaKnown RBP5□□□□□ -1.61
SRP54-209ENST00000555746 NKX2-4Q9H2Z4 354 aa5□□□□□ -1.61
SRP54-209ENST00000555746 ATP13A1Q9HD20 1204 aa5□□□□□ -1.61
SRP54-209ENST00000555746 CYP26B1Q9NR63 512 aa5□□□□□ -1.61
SRP54-209ENST00000555746 TMEM260Q9NX78 707 aa5□□□□□ -1.61
SRP54-209ENST00000555746 LMCD1Q9NZU5 365 aa5□□□□□ -1.61
SRP54-209ENST00000555746 DUSP13Q9UII6 198 aa5□□□□□ -1.61
SRP54-209ENST00000555746 MRPL42Q9Y6G3 142 aaKnown RBP5□□□□□ -1.61
SRP54-209ENST00000555746 ATAD2BQ9ULI0 1458 aa5□□□□□ -1.61
SRP54-209ENST00000555746 TRAV20A0A0B4J274 112 aa4.99□□□□□ -1.61
SRP54-209ENST00000555746 CCDC163A0A0D9SF12 145 aa4.99□□□□□ -1.61
SRP54-209ENST00000555746 MEIS1O00470 390 aa4.99□□□□□ -1.61
SRP54-209ENST00000555746 TBX1O43435 398 aa4.99□□□□□ -1.61
SRP54-209ENST00000555746 KCNH1O95259 989 aa4.99□□□□□ -1.61
SRP54-209ENST00000555746 SCG5P05408 212 aa4.99□□□□□ -1.61
SRP54-209ENST00000555746 FAM153BP0C7A2 387 aa4.99□□□□□ -1.61
SRP54-209ENST00000555746 VAV1P15498 845 aa4.99□□□□□ -1.61
SRP54-209ENST00000555746 ENDOUP21128 410 aaKnown RBP4.99□□□□□ -1.61
SRP54-209ENST00000555746 HOXC12P31275 282 aa4.99□□□□□ -1.61
SRP54-209ENST00000555746 NOP2P46087 812 aaKnown RBP4.99□□□□□ -1.61
SRP54-209ENST00000555746 PCBP3P57721 371 aaKnown RBP4.99□□□□□ -1.61
SRP54-209ENST00000555746 SQSTM1Q13501 440 aa4.99□□□□□ -1.61
SRP54-209ENST00000555746 PPP2R5DQ14738 602 aa4.99□□□□□ -1.61
SRP54-209ENST00000555746 GTF2IRD2BQ6EKJ0 949 aa4.99□□□□□ -1.61
SRP54-209ENST00000555746 GTF2IRD2Q86UP8 949 aa4.99□□□□□ -1.61
SRP54-209ENST00000555746 VSIG10LQ86VR7 867 aa4.99□□□□□ -1.61
SRP54-209ENST00000555746 ZSWIM2Q8NEG5 633 aa4.99□□□□□ -1.61
SRP54-209ENST00000555746 BTN2A2Q8WVV5 523 aa4.99□□□□□ -1.61
SRP54-209ENST00000555746 PPP1R14AQ96A00 147 aa4.99□□□□□ -1.61
SRP54-209ENST00000555746 SLC26A8Q96RN1 970 aa4.99□□□□□ -1.61
SRP54-209ENST00000555746 MCMBPQ9BTE3 642 aa4.99□□□□□ -1.61
SRP54-209ENST00000555746 LGR4Q9BXB1 951 aa4.99□□□□□ -1.61
SRP54-209ENST00000555746 SLC12A9Q9BXP2 914 aa4.99□□□□□ -1.61
SRP54-209ENST00000555746 KANSL2Q9H9L4 492 aa4.99□□□□□ -1.61
SRP54-209ENST00000555746 CCDC39Q9UFE4 941 aa4.99□□□□□ -1.61
SRP54-209ENST00000555746 TCFL5Q9UL49 500 aa4.99□□□□□ -1.61
SRP54-209ENST00000555746 SLC5A6Q9Y289 635 aa4.99□□□□□ -1.61
SRP54-209ENST00000555746 PTCH2Q9Y6C5 1203 aa4.99□□□□□ -1.61
SRP54-209ENST00000555746 CHD1O14646 1710 aa4.99□□□□□ -1.61
SRP54-209ENST00000555746 AURKAO14965 403 aa4.98□□□□□ -1.61
SRP54-209ENST00000555746 SMARCA5O60264 1052 aaPredicted RBP4.98□□□□□ -1.61
SRP54-209ENST00000555746 VAMP4O75379 141 aa4.98□□□□□ -1.61
SRP54-209ENST00000555746 CD8BP10966 210 aa4.98□□□□□ -1.61
SRP54-209ENST00000555746 GRIA2P42262 883 aa4.98□□□□□ -1.61
SRP54-209ENST00000555746 TEKQ02763 1124 aa4.98□□□□□ -1.61
SRP54-209ENST00000555746 CYP4F3Q08477 520 aa4.98□□□□□ -1.61
SRP54-209ENST00000555746 BNIP3Q12983 259 aa4.98□□□□□ -1.61
SRP54-209ENST00000555746 TMEM67Q5HYA8 995 aa4.98□□□□□ -1.61
SRP54-209ENST00000555746 RTP2Q5QGT7 225 aa4.98□□□□□ -1.61
SRP54-209ENST00000555746 SDE2Q6IQ49 451 aa4.98□□□□□ -1.61
SRP54-209ENST00000555746 RCSD1Q6JBY9 416 aa4.98□□□□□ -1.61
SRP54-209ENST00000555746 NFXL1Q6ZNB6 911 aa4.98□□□□□ -1.61
SRP54-209ENST00000555746 CREG2Q8IUH2 290 aa4.98□□□□□ -1.61
SRP54-209ENST00000555746 COPS5Q92905 334 aa4.98□□□□□ -1.61
SRP54-209ENST00000555746 KISS1RQ969F8 398 aaPredicted RBP4.98□□□□□ -1.61
SRP54-209ENST00000555746 FCRL3Q96P31 734 aaPredicted RBP4.98□□□□□ -1.61
SRP54-209ENST00000555746 FOXP3Q9BZS1 431 aa4.98□□□□□ -1.61
SRP54-209ENST00000555746 PCDHA11Q9Y5I1 949 aa4.98□□□□□ -1.61
SRP54-209ENST00000555746 TTBK1Q5TCY1 1321 aaPredicted RBP4.97□□□□□ -1.61
SRP54-209ENST00000555746 KDM6BO15054 1643 aa4.97□□□□□ -1.61
SRP54-209ENST00000555746 CPP00450 1065 aa4.97□□□□□ -1.61
SRP54-209ENST00000555746 CD3EP07766 207 aa4.97□□□□□ -1.61
SRP54-209ENST00000555746 SYPP08247 313 aa4.97□□□□□ -1.61
SRP54-209ENST00000555746 LTKP29376 864 aa4.97□□□□□ -1.61
SRP54-209ENST00000555746 SSTR4P31391 388 aa4.97□□□□□ -1.61
SRP54-209ENST00000555746 GFRA1P56159 465 aa4.97□□□□□ -1.61
SRP54-209ENST00000555746 EGR3Q06889 387 aa4.97□□□□□ -1.61
SRP54-209ENST00000555746 MAP4K2Q12851 820 aa4.97□□□□□ -1.61
SRP54-209ENST00000555746 TESK1Q15569 626 aa4.97□□□□□ -1.61
SRP54-209ENST00000555746 ANGEL2Q5VTE6 544 aaKnown RBP4.97□□□□□ -1.61
SRP54-209ENST00000555746 FOXB2Q5VYV0 432 aa4.97□□□□□ -1.61
SRP54-209ENST00000555746 SPRED2Q7Z698 418 aa4.97□□□□□ -1.61
SRP54-209ENST00000555746 SCUBE1Q8IWY4 988 aa4.97□□□□□ -1.61
SRP54-209ENST00000555746 SYNPOQ8N3V7 929 aa4.97□□□□□ -1.61
SRP54-209ENST00000555746 OSBP2Q969R2 916 aa4.97□□□□□ -1.61
SRP54-209ENST00000555746 C1orf159Q96HA4 380 aa4.97□□□□□ -1.61
SRP54-209ENST00000555746 EXOC2Q96KP1 924 aa4.97□□□□□ -1.61
SRP54-209ENST00000555746 CWC22Q9HCG8 908 aaKnown RBP4.97□□□□□ -1.61
SRP54-209ENST00000555746 GPR55Q9Y2T6 319 aaPredicted RBP4.97□□□□□ -1.61
SRP54-209ENST00000555746 BACE2Q9Y5Z0 518 aa4.97□□□□□ -1.61
SRP54-209ENST00000555746 SSU72P8A0A1W2PR75 194 aa4.96□□□□□ -1.62
SRP54-209ENST00000555746 ESYT3A0FGR9 886 aa4.96□□□□□ -1.62
SRP54-209ENST00000555746 TMEM82A0PJX8 343 aa4.96□□□□□ -1.62
SRP54-209ENST00000555746 FGF10O15520 208 aaPredicted RBP4.96□□□□□ -1.62
SRP54-209ENST00000555746 DLX3O60479 287 aa4.96□□□□□ -1.62
SRP54-209ENST00000555746 PABPC1P11940 636 aaKnown RBP4.96□□□□□ -1.62
SRP54-209ENST00000555746 IFNGR1P15260 489 aa4.96□□□□□ -1.62
SRP54-209ENST00000555746 HSD3B2P26439 372 aa4.96□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms