RNA–Protein interactions for RNA: ENST00000551165.5

SSH1-209, Transcript of slingshot protein phosphatase 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SSH1, Length 2,354 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-209ENST00000551165 CAP2P40123 477 aa22.47■■□□□ 1.19
SSH1-209ENST00000551165 GMCL1Q96IK5 515 aa22.47■■□□□ 1.19
SSH1-209ENST00000551165 CBX8Q9HC52 389 aa22.47■■□□□ 1.19
SSH1-209ENST00000551165 POLR2DO15514 142 aaKnown RBP22.47■■□□□ 1.19
SSH1-209ENST00000551165 MAP3K10Q02779 954 aa22.47■■□□□ 1.19
SSH1-209ENST00000551165 ZYXQ15942 572 aaKnown RBP22.47■■□□□ 1.19
SSH1-209ENST00000551165 TMEM60Q9H2L4 133 aa22.47■■□□□ 1.19
SSH1-209ENST00000551165 KIAA1468Q9P260 1216 aa22.47■■□□□ 1.19
SSH1-209ENST00000551165 ESYT2A0FGR8 921 aa22.46■■□□□ 1.19
SSH1-209ENST00000551165 PHF20L1A8MW92 1017 aa22.46■■□□□ 1.19
SSH1-209ENST00000551165 TMEM232C9JQI7 657 aa22.46■■□□□ 1.19
SSH1-209ENST00000551165 AP5Z1O43299 807 aa22.46■■□□□ 1.19
SSH1-209ENST00000551165 TNNI2P48788 182 aa22.46■■□□□ 1.19
SSH1-209ENST00000551165 UBE2SQ16763 222 aa22.46■■□□□ 1.19
SSH1-209ENST00000551165 PRAMEF18Q5VWM3 479 aa22.46■■□□□ 1.19
SSH1-209ENST00000551165 TRPM4Q8TD43 1214 aa22.46■■□□□ 1.19
SSH1-209ENST00000551165 PPP1R9BQ96SB3 815 aa22.46■■□□□ 1.19
SSH1-209ENST00000551165 USP25Q9UHP3 1055 aa22.46■■□□□ 1.19
SSH1-209ENST00000551165 MORC2Q9Y6X9 1032 aaPredicted RBP22.46■■□□□ 1.19
SSH1-209ENST00000551165 BIN1O00499 593 aa22.46■■□□□ 1.19
SSH1-209ENST00000551165 PNOCQ13519 176 aa22.46■■□□□ 1.19
SSH1-209ENST00000551165 CDC37Q16543 378 aaPredicted RBP22.46■■□□□ 1.19
SSH1-209ENST00000551165 REXO1Q8N1G1 1221 aaKnown RBP22.46■■□□□ 1.19
SSH1-209ENST00000551165 FAM200AQ8TCP9 573 aa22.46■■□□□ 1.19
SSH1-209ENST00000551165 SYMPKQ92797 1274 aaKnown RBP22.46■■□□□ 1.19
SSH1-209ENST00000551165 BMP3P12645 472 aa22.45■■□□□ 1.18
SSH1-209ENST00000551165 ADCY7P51828 1080 aa22.45■■□□□ 1.18
SSH1-209ENST00000551165 ISM2Q6H9L7 571 aa22.45■■□□□ 1.18
SSH1-209ENST00000551165 KRBA2Q6ZNG9 492 aa22.45■■□□□ 1.18
SSH1-209ENST00000551165 FAM177A1Q8N128 213 aaPredicted RBP22.45■■□□□ 1.18
SSH1-209ENST00000551165 TIGD1Q96MW7 591 aa22.45■■□□□ 1.18
SSH1-209ENST00000551165 DEFB129Q9H1M3 183 aa22.45■■□□□ 1.18
SSH1-209ENST00000551165 FAM13BQ9NYF5 915 aa22.45■■□□□ 1.18
SSH1-209ENST00000551165 SERTAD1Q9UHV2 236 aa22.45■■□□□ 1.18
SSH1-209ENST00000551165 TMX2Q9Y320 296 aa22.45■■□□□ 1.18
SSH1-209ENST00000551165 EDIL3O43854 480 aa22.45■■□□□ 1.18
SSH1-209ENST00000551165 BMP15O95972 392 aa22.45■■□□□ 1.18
SSH1-209ENST00000551165 LMNB1P20700 586 aa22.45■■□□□ 1.18
SSH1-209ENST00000551165 TBCKQ8TEA7 893 aa22.45■■□□□ 1.18
SSH1-209ENST00000551165 hCG_1984214I3L0E3 225 aa22.44■■□□□ 1.18
SSH1-209ENST00000551165 CCDC173Q0VFZ6 552 aa22.44■■□□□ 1.18
SSH1-209ENST00000551165 IKQ13123 557 aaPredicted RBP22.44■■□□□ 1.18
SSH1-209ENST00000551165 NONOQ15233 471 aaKnown RBP eCLIP22.44■■□□□ 1.18
SSH1-209ENST00000551165 LETM2Q2VYF4 491 aa22.44■■□□□ 1.18
SSH1-209ENST00000551165 NBPF12Q5TAG4 269 aaPredicted RBP22.44■■□□□ 1.18
SSH1-209ENST00000551165 KRT25Q7Z3Z0 450 aa22.44■■□□□ 1.18
SSH1-209ENST00000551165 GRAMD1CQ8IYS0 662 aa22.44■■□□□ 1.18
SSH1-209ENST00000551165 ZNF713Q8N859 430 aaPredicted RBP22.44■■□□□ 1.18
SSH1-209ENST00000551165 CNNM3Q8NE01 707 aa22.44■■□□□ 1.18
SSH1-209ENST00000551165 FERMT2Q96AC1 680 aa22.44■■□□□ 1.18
SSH1-209ENST00000551165 SYT17Q9BSW7 474 aa22.44■■□□□ 1.18
SSH1-209ENST00000551165 ARHGEF10LQ9HCE6 1279 aa22.44■■□□□ 1.18
SSH1-209ENST00000551165 CDC25AP30304 524 aa22.43■■□□□ 1.18
SSH1-209ENST00000551165 ANP32BQ92688 251 aaKnown RBP22.43■■□□□ 1.18
SSH1-209ENST00000551165 FZD1Q9UP38 647 aa22.43■■□□□ 1.18
SSH1-209ENST00000551165 EPS15P42566 896 aa22.43■■□□□ 1.18
SSH1-209ENST00000551165 ZNF165P49910 485 aa22.43■■□□□ 1.18
SSH1-209ENST00000551165 UVSSAQ2YD98 709 aa22.43■■□□□ 1.18
SSH1-209ENST00000551165 ANGEL2Q5VTE6 544 aaKnown RBP22.43■■□□□ 1.18
SSH1-209ENST00000551165 MMP14P50281 582 aa22.42■■□□□ 1.18
SSH1-209ENST00000551165 STX1AQ16623 288 aa22.42■■□□□ 1.18
SSH1-209ENST00000551165 FAM83BQ5T0W9 1011 aa22.42■■□□□ 1.18
SSH1-209ENST00000551165 PDLIM2Q96JY6 352 aa22.42■■□□□ 1.18
SSH1-209ENST00000551165 GPRC5DQ9NZD1 345 aa22.42■■□□□ 1.18
SSH1-209ENST00000551165 PCDHA1Q9Y5I3 950 aa22.42■■□□□ 1.18
SSH1-209ENST00000551165 SBF1O95248 1867 aa22.42■■□□□ 1.18
SSH1-209ENST00000551165 CCNT1O60563 726 aaKnown RBP22.42■■□□□ 1.18
SSH1-209ENST00000551165 PRR29P0C7W0 189 aa22.42■■□□□ 1.18
SSH1-209ENST00000551165 YBX3P16989 372 aaKnown RBP eCLIP22.42■■□□□ 1.18
SSH1-209ENST00000551165 HIRAP54198 1017 aaPredicted RBP22.42■■□□□ 1.18
SSH1-209ENST00000551165 MDM2Q00987 491 aaPredicted RBP22.42■■□□□ 1.18
SSH1-209ENST00000551165 TNFAIP1Q13829 316 aa22.42■■□□□ 1.18
SSH1-209ENST00000551165 DPCR1Q3MIW9 517 aa22.42■■□□□ 1.18
SSH1-209ENST00000551165 SYDE2Q5VT97 1194 aa22.42■■□□□ 1.18
SSH1-209ENST00000551165 RIC8AQ9NPQ8 531 aa22.42■■□□□ 1.18
SSH1-209ENST00000551165 H7C1D1 291 aa22.41■■□□□ 1.18
SSH1-209ENST00000551165 ACTN4O43707 911 aaKnown RBP22.41■■□□□ 1.18
SSH1-209ENST00000551165 DHX58Q96C10 678 aa22.41■■□□□ 1.18
SSH1-209ENST00000551165 DGKZQ13574 1117 aa22.41■■□□□ 1.18
SSH1-209ENST00000551165 PRR12Q9ULL5 1215 aa22.41■■□□□ 1.18
SSH1-209ENST00000551165 USP17L15C9J2P7 530 aa22.4■■□□□ 1.18
SSH1-209ENST00000551165 USP17L13C9JLJ4 530 aa22.4■■□□□ 1.18
SSH1-209ENST00000551165 USP17L11C9JVI0 530 aa22.4■■□□□ 1.18
SSH1-209ENST00000551165 USP17L18D6R9N7 530 aa22.4■■□□□ 1.18
SSH1-209ENST00000551165 USP17L22D6RA61 530 aa22.4■■□□□ 1.18
SSH1-209ENST00000551165 USP17L17D6RBQ6 530 aa22.4■■□□□ 1.18
SSH1-209ENST00000551165 USP17L19D6RCP7 530 aa22.4■■□□□ 1.18
SSH1-209ENST00000551165 USP17L20D6RJB6 530 aa22.4■■□□□ 1.18
SSH1-209ENST00000551165 CLK2P49760 499 aaKnown RBP22.4■■□□□ 1.18
SSH1-209ENST00000551165 PLCB2Q00722 1185 aa22.4■■□□□ 1.18
SSH1-209ENST00000551165 USP17L24Q0WX57 530 aa22.4■■□□□ 1.18
SSH1-209ENST00000551165 USH1GQ495M9 461 aa22.4■■□□□ 1.18
SSH1-209ENST00000551165 USP17L6PQ6QN14 398 aa22.4■■□□□ 1.18
SSH1-209ENST00000551165 NEK8Q86SG6 692 aa22.4■■□□□ 1.18
SSH1-209ENST00000551165 PSTPIP2Q9H939 334 aa22.4■■□□□ 1.18
SSH1-209ENST00000551165 DICER1Q9UPY3 1922 aaKnown RBP22.4■■□□□ 1.18
SSH1-209ENST00000551165 PP2D1A8MPX8 630 aa22.4■■□□□ 1.18
SSH1-209ENST00000551165 DDNO94850 711 aaPredicted RBP22.4■■□□□ 1.18
SSH1-209ENST00000551165 IQCB1Q15051 598 aa22.4■■□□□ 1.18
SSH1-209ENST00000551165 PPP1R18Q6NYC8 613 aa22.4■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms