RNA–Protein interactions for RNA: ENST00000550253.1

TGFBR1-208, Transcript of transforming growth factor beta receptor 1, humanhuman

TSL 2 BASIC

Gene TGFBR1, Length 1,538 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR1-208ENST00000550253 PPP1R9AQ9ULJ8 1098 aa8.15□□□□□ -1.1
TGFBR1-208ENST00000550253 PIK3C2BO00750 1634 aa8.15□□□□□ -1.11
TGFBR1-208ENST00000550253 TBX1O43435 398 aa8.14□□□□□ -1.11
TGFBR1-208ENST00000550253 CLEC3AO75596 197 aa8.14□□□□□ -1.11
TGFBR1-208ENST00000550253 POU3F2P20265 443 aaPredicted RBP8.14□□□□□ -1.11
TGFBR1-208ENST00000550253 GBP1P32455 592 aa8.14□□□□□ -1.11
TGFBR1-208ENST00000550253 SLCO4C1Q6ZQN7 724 aa8.14□□□□□ -1.11
TGFBR1-208ENST00000550253 C8orf86Q6ZUL3 223 aa8.14□□□□□ -1.11
TGFBR1-208ENST00000550253 CCAR1Q8IX12 1150 aaKnown RBP8.14□□□□□ -1.11
TGFBR1-208ENST00000550253 PPM1KQ8N3J5 372 aa8.14□□□□□ -1.11
TGFBR1-208ENST00000550253 RNF214Q8ND24 703 aa8.14□□□□□ -1.11
TGFBR1-208ENST00000550253 SLC7A14Q8TBB6 771 aa8.14□□□□□ -1.11
TGFBR1-208ENST00000550253 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP8.14□□□□□ -1.11
TGFBR1-208ENST00000550253 PICK1Q9NRD5 415 aa8.14□□□□□ -1.11
TGFBR1-208ENST00000550253 DISC1Q9NRI5 854 aa8.14□□□□□ -1.11
TGFBR1-208ENST00000550253 SETD1AO15047 1707 aaKnown RBP8.14□□□□□ -1.11
TGFBR1-208ENST00000550253 ARHGAP23Q9P227 1491 aa8.14□□□□□ -1.11
TGFBR1-208ENST00000550253 SLIT1O75093 1534 aa8.14□□□□□ -1.11
TGFBR1-208ENST00000550253 TSPAN6O43657 245 aa8.13□□□□□ -1.11
TGFBR1-208ENST00000550253 EPXP11678 715 aa8.13□□□□□ -1.11
TGFBR1-208ENST00000550253 LTKP29376 864 aa8.13□□□□□ -1.11
TGFBR1-208ENST00000550253 MCL1Q07820 350 aa8.13□□□□□ -1.11
TGFBR1-208ENST00000550253 SLBPQ14493 270 aaKnown RBP eCLIP8.13□□□□□ -1.11
TGFBR1-208ENST00000550253 ANKRD39Q53RE8 183 aa8.13□□□□□ -1.11
TGFBR1-208ENST00000550253 DCAF15Q66K64 600 aa8.13□□□□□ -1.11
TGFBR1-208ENST00000550253 GOLGA6L1Q8N7Z2 621 aa8.13□□□□□ -1.11
TGFBR1-208ENST00000550253 MRGPRX3Q96LB0 322 aa8.13□□□□□ -1.11
TGFBR1-208ENST00000550253 DPH2Q9BQC3 489 aaPredicted RBP8.13□□□□□ -1.11
TGFBR1-208ENST00000550253 RAD18Q9NS91 495 aa8.13□□□□□ -1.11
TGFBR1-208ENST00000550253 SFMBT1Q9UHJ3 866 aa8.13□□□□□ -1.11
TGFBR1-208ENST00000550253 CROCC2H7BZ55 1655 aa8.13□□□□□ -1.11
TGFBR1-208ENST00000550253 KATNA1O75449 491 aa8.13□□□□□ -1.11
TGFBR1-208ENST00000550253 CPEP16870 476 aa8.13□□□□□ -1.11
TGFBR1-208ENST00000550253 CAP2P40123 477 aa8.13□□□□□ -1.11
TGFBR1-208ENST00000550253 FOXD4L6Q3SYB3 417 aaPredicted RBP8.13□□□□□ -1.11
TGFBR1-208ENST00000550253 EXOSC6Q5RKV6 272 aaKnown RBP8.13□□□□□ -1.11
TGFBR1-208ENST00000550253 FOXD4L3Q6VB84 417 aaPredicted RBP8.13□□□□□ -1.11
TGFBR1-208ENST00000550253 AHI1Q8N157 1196 aa8.13□□□□□ -1.11
TGFBR1-208ENST00000550253 BVESQ8NE79 360 aa8.13□□□□□ -1.11
TGFBR1-208ENST00000550253 GSTCDQ8NEC7 633 aa8.13□□□□□ -1.11
TGFBR1-208ENST00000550253 CYB5D2Q8WUJ1 264 aa8.13□□□□□ -1.11
TGFBR1-208ENST00000550253 LEO1Q8WVC0 666 aaPredicted RBP8.13□□□□□ -1.11
TGFBR1-208ENST00000550253 PMM1Q92871 262 aa8.13□□□□□ -1.11
TGFBR1-208ENST00000550253 PPP1R14AQ96A00 147 aa8.13□□□□□ -1.11
TGFBR1-208ENST00000550253 LRRC4BQ9NT99 713 aa8.13□□□□□ -1.11
TGFBR1-208ENST00000550253 KCNK4Q9NYG8 393 aa8.13□□□□□ -1.11
TGFBR1-208ENST00000550253 ZNF451Q9Y4E5 1061 aa8.13□□□□□ -1.11
TGFBR1-208ENST00000550253 SCAF11Q99590 1463 aaKnown RBP8.12□□□□□ -1.11
TGFBR1-208ENST00000550253 PRDM15P57071 1507 aaPredicted RBP8.12□□□□□ -1.11
TGFBR1-208ENST00000550253 ROBO1Q9Y6N7 1651 aa8.12□□□□□ -1.11
TGFBR1-208ENST00000550253 M0R082 166 aa8.12□□□□□ -1.11
TGFBR1-208ENST00000550253 NPTXRO95502 500 aa8.12□□□□□ -1.11
TGFBR1-208ENST00000550253 CD68P34810 354 aaPredicted RBP8.12□□□□□ -1.11
TGFBR1-208ENST00000550253 PCBP1Q15365 356 aaKnown RBP eCLIP8.12□□□□□ -1.11
TGFBR1-208ENST00000550253 LHFPL2Q6ZUX7 228 aa8.12□□□□□ -1.11
TGFBR1-208ENST00000550253 NECAB2Q7Z6G3 386 aa8.12□□□□□ -1.11
TGFBR1-208ENST00000550253 UBE3DQ7Z6J8 389 aa8.12□□□□□ -1.11
TGFBR1-208ENST00000550253 MAP4K3Q8IVH8 894 aa8.12□□□□□ -1.11
TGFBR1-208ENST00000550253 WDR75Q8IWA0 830 aaKnown RBP8.12□□□□□ -1.11
TGFBR1-208ENST00000550253 CCDC144CPQ8IYA2 1237 aa8.12□□□□□ -1.11
TGFBR1-208ENST00000550253 EXOC8Q8IYI6 725 aa8.12□□□□□ -1.11
TGFBR1-208ENST00000550253 GPR161Q8N6U8 529 aaKnown RBP8.12□□□□□ -1.11
TGFBR1-208ENST00000550253 ZNF417Q8TAU3 575 aa8.12□□□□□ -1.11
TGFBR1-208ENST00000550253 FANCD2OSQ96PS1 177 aa8.12□□□□□ -1.11
TGFBR1-208ENST00000550253 ZNF587Q96SQ5 575 aaPredicted RBP8.12□□□□□ -1.11
TGFBR1-208ENST00000550253 SLC52A2Q9HAB3 445 aa8.12□□□□□ -1.11
TGFBR1-208ENST00000550253 LRRC9Q6ZRR7 1453 aa8.12□□□□□ -1.11
TGFBR1-208ENST00000550253 MAP3K1Q13233 1512 aa8.12□□□□□ -1.11
TGFBR1-208ENST00000550253 SPDYE3A6NKU9 549 aa8.11□□□□□ -1.11
TGFBR1-208ENST00000550253 RASGRP1O95267 797 aa8.11□□□□□ -1.11
TGFBR1-208ENST00000550253 CD247P20963 164 aa8.11□□□□□ -1.11
TGFBR1-208ENST00000550253 STRN3Q13033 797 aa8.11□□□□□ -1.11
TGFBR1-208ENST00000550253 PPP2R5AQ15172 486 aa8.11□□□□□ -1.11
TGFBR1-208ENST00000550253 LRRC41Q15345 812 aa8.11□□□□□ -1.11
TGFBR1-208ENST00000550253 GORABQ5T7V8 394 aa8.11□□□□□ -1.11
TGFBR1-208ENST00000550253 BRAPQ7Z569 592 aa8.11□□□□□ -1.11
TGFBR1-208ENST00000550253 FGD2Q7Z6J4 655 aa8.11□□□□□ -1.11
TGFBR1-208ENST00000550253 ADAT2Q7Z6V5 191 aaKnown RBP8.11□□□□□ -1.11
TGFBR1-208ENST00000550253 ZNF512BQ96KM6 892 aaPredicted RBP8.11□□□□□ -1.11
TGFBR1-208ENST00000550253 MTFR1LQ9H019 292 aa8.11□□□□□ -1.11
TGFBR1-208ENST00000550253 LOC101059915A0A1B0GWI6 518 aaPredicted RBP8.1□□□□□ -1.11
TGFBR1-208ENST00000550253 SHOXO15266 292 aa8.1□□□□□ -1.11
TGFBR1-208ENST00000550253 TET3O43151 1660 aa8.1□□□□□ -1.11
TGFBR1-208ENST00000550253 DLX3O60479 287 aa8.1□□□□□ -1.11
TGFBR1-208ENST00000550253 CST3P01034 146 aaPredicted RBP8.1□□□□□ -1.11
TGFBR1-208ENST00000550253 NEFMP07197 916 aa8.1□□□□□ -1.11
TGFBR1-208ENST00000550253 MTMR1Q13613 665 aa8.1□□□□□ -1.11
TGFBR1-208ENST00000550253 DHCR24Q15392 516 aa8.1□□□□□ -1.11
TGFBR1-208ENST00000550253 PRAMEF13Q5VWM6 474 aa8.1□□□□□ -1.11
TGFBR1-208ENST00000550253 PKN3Q6P5Z2 889 aa8.1□□□□□ -1.11
TGFBR1-208ENST00000550253 C1orf229Q6ZS94 237 aaPredicted RBP8.1□□□□□ -1.11
TGFBR1-208ENST00000550253 WDR66Q8TBY9 1149 aa8.1□□□□□ -1.11
TGFBR1-208ENST00000550253 PPP1R13LQ8WUF5 828 aa8.1□□□□□ -1.11
TGFBR1-208ENST00000550253 RCC1LQ96I51 464 aaKnown RBP8.1□□□□□ -1.11
TGFBR1-208ENST00000550253 TMPRSS13Q9BYE2 586 aa8.1□□□□□ -1.11
TGFBR1-208ENST00000550253 GBP3Q9H0R5 595 aa8.1□□□□□ -1.11
TGFBR1-208ENST00000550253 PRDM6Q9NQX0 595 aa8.1□□□□□ -1.11
TGFBR1-208ENST00000550253 SLC5A4Q9NY91 659 aa8.1□□□□□ -1.11
TGFBR1-208ENST00000550253 WHRNQ9P202 907 aa8.1□□□□□ -1.11
TGFBR1-208ENST00000550253 NDOR1Q9UHB4 597 aa8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms