RNA–Protein interactions for RNA: ENST00000548825.6

PRPF40B-209, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

APPRIS P2 TSL 5 BASIC

Gene PRPF40B, Length 3,307 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-209ENST00000548825 GPSM2P81274 684 aa15.35■□□□□ 0.05
PRPF40B-209ENST00000548825 DISC1Q9NRI5 854 aa15.35■□□□□ 0.05
PRPF40B-209ENST00000548825 NUP98P52948 1817 aa15.35■□□□□ 0.05
PRPF40B-209ENST00000548825 COL4A1P02462 1669 aa15.35■□□□□ 0.05
PRPF40B-209ENST00000548825 ABCC6O95255 1503 aa15.35■□□□□ 0.05
PRPF40B-209ENST00000548825 TTC26A0AVF1 554 aa15.35■□□□□ 0.05
PRPF40B-209ENST00000548825 CDK8P49336 464 aa15.35■□□□□ 0.05
PRPF40B-209ENST00000548825 TCP11X2Q5H9J9 407 aa15.35■□□□□ 0.05
PRPF40B-209ENST00000548825 CNGA4Q8IV77 575 aa15.35■□□□□ 0.05
PRPF40B-209ENST00000548825 DEF6Q9H4E7 631 aa15.35■□□□□ 0.05
PRPF40B-209ENST00000548825 PCDHA6Q9UN73 950 aa15.35■□□□□ 0.05
PRPF40B-209ENST00000548825 PCDHA8Q9Y5H6 950 aa15.35■□□□□ 0.05
PRPF40B-209ENST00000548825 PHLPP2Q6ZVD8 1323 aa15.35■□□□□ 0.05
PRPF40B-209ENST00000548825 ERVK-24P63145 666 aa15.35■□□□□ 0.05
PRPF40B-209ENST00000548825 CCDC122Q5T0U0 273 aa15.35■□□□□ 0.05
PRPF40B-209ENST00000548825 WDR66Q8TBY9 1149 aa15.35■□□□□ 0.05
PRPF40B-209ENST00000548825 GOLGA1Q92805 767 aa15.35■□□□□ 0.05
PRPF40B-209ENST00000548825 JADE2Q9NQC1 790 aa15.35■□□□□ 0.05
PRPF40B-209ENST00000548825 AGPAT5Q9NUQ2 364 aa15.35■□□□□ 0.05
PRPF40B-209ENST00000548825 RPS6KA4O75676 772 aa15.34■□□□□ 0.05
PRPF40B-209ENST00000548825 PPP2R5BQ15173 497 aa15.34■□□□□ 0.05
PRPF40B-209ENST00000548825 DPP8Q6V1X1 898 aaPredicted RBP15.34■□□□□ 0.05
PRPF40B-209ENST00000548825 KCTD1Q719H9 257 aa15.34■□□□□ 0.05
PRPF40B-209ENST00000548825 RGS22Q8NE09 1264 aa15.34■□□□□ 0.05
PRPF40B-209ENST00000548825 RRP36Q96EU6 259 aaKnown RBP15.34■□□□□ 0.05
PRPF40B-209ENST00000548825 DDX52Q9Y2R4 599 aaKnown RBP eCLIP15.34■□□□□ 0.05
PRPF40B-209ENST00000548825 FAM237AA0A1B0GTK4 181 aa15.34■□□□□ 0.05
PRPF40B-209ENST00000548825 NKRFO15226 690 aaKnown RBP eCLIP15.34■□□□□ 0.05
PRPF40B-209ENST00000548825 POTEDQ86YR6 584 aa15.34■□□□□ 0.05
PRPF40B-209ENST00000548825 CRACR2AQ9BSW2 395 aa15.34■□□□□ 0.05
PRPF40B-209ENST00000548825 STK4Q13043 487 aa15.33■□□□□ 0.05
PRPF40B-209ENST00000548825 TBX2Q13207 712 aaPredicted RBP15.33■□□□□ 0.05
PRPF40B-209ENST00000548825 SYCP1Q15431 976 aa15.33■□□□□ 0.05
PRPF40B-209ENST00000548825 NELFCDQ8IXH7 590 aa15.33■□□□□ 0.05
PRPF40B-209ENST00000548825 CCDC47Q96A33 483 aaKnown RBP15.33■□□□□ 0.05
PRPF40B-209ENST00000548825 MAD2L2Q9UI95 211 aa15.33■□□□□ 0.05
PRPF40B-209ENST00000548825 TAL1P17542 331 aaPredicted RBP15.33■□□□□ 0.04
PRPF40B-209ENST00000548825 RNASE9P60153 205 aaKnown RBP15.33■□□□□ 0.04
PRPF40B-209ENST00000548825 SLC35G1Q2M3R5 365 aa15.33■□□□□ 0.04
PRPF40B-209ENST00000548825 MSL1Q68DK7 614 aa15.33■□□□□ 0.04
PRPF40B-209ENST00000548825 KRT26Q7Z3Y9 468 aa15.33■□□□□ 0.04
PRPF40B-209ENST00000548825 NOC4LQ9BVI4 516 aaKnown RBP15.33■□□□□ 0.04
PRPF40B-209ENST00000548825 ABHD10Q9NUJ1 306 aa15.33■□□□□ 0.04
PRPF40B-209ENST00000548825 GGA1Q9UJY5 639 aa15.33■□□□□ 0.04
PRPF40B-209ENST00000548825 PLEKHG2Q9H7P9 1386 aa15.33■□□□□ 0.04
PRPF40B-209ENST00000548825 EFCAB8A8MWE9 144 aa15.33■□□□□ 0.04
PRPF40B-209ENST00000548825 TDP2O95551 362 aa15.33■□□□□ 0.04
PRPF40B-209ENST00000548825 OAS2P29728 719 aaKnown RBP15.33■□□□□ 0.04
PRPF40B-209ENST00000548825 CCDC93Q567U6 631 aa15.33■□□□□ 0.04
PRPF40B-209ENST00000548825 ZNF658Q5TYW1 1059 aaPredicted RBP15.33■□□□□ 0.04
PRPF40B-209ENST00000548825 AEBP2Q6ZN18 517 aaPredicted RBP15.33■□□□□ 0.04
PRPF40B-209ENST00000548825 CCDC148Q8NFR7 591 aa15.33■□□□□ 0.04
PRPF40B-209ENST00000548825 SMCR8Q8TEV9 937 aaPredicted RBP15.33■□□□□ 0.04
PRPF40B-209ENST00000548825 DUSP10Q9Y6W6 482 aa15.33■□□□□ 0.04
PRPF40B-209ENST00000548825 MYH14Q7Z406 1995 aaKnown RBP15.32■□□□□ 0.04
PRPF40B-209ENST00000548825 ORC4O43929 436 aa15.32■□□□□ 0.04
PRPF40B-209ENST00000548825 RASA1P20936 1047 aa15.32■□□□□ 0.04
PRPF40B-209ENST00000548825 NONOQ15233 471 aaKnown RBP eCLIP15.32■□□□□ 0.04
PRPF40B-209ENST00000548825 TTBK2Q6IQ55 1244 aa15.32■□□□□ 0.04
PRPF40B-209ENST00000548825 PDXDC2PQ6P474 469 aa15.32■□□□□ 0.04
PRPF40B-209ENST00000548825 NOC3LQ8WTT2 800 aaKnown RBP15.32■□□□□ 0.04
PRPF40B-209ENST00000548825 GTPBP4Q9BZE4 634 aaKnown RBP15.32■□□□□ 0.04
PRPF40B-209ENST00000548825 CD209Q9NNX6 404 aa15.32■□□□□ 0.04
PRPF40B-209ENST00000548825 ZNHIT6Q9NWK9 470 aaKnown RBP15.32■□□□□ 0.04
PRPF40B-209ENST00000548825 RMND1Q9NWS8 449 aa15.32■□□□□ 0.04
PRPF40B-209ENST00000548825 MORC2Q9Y6X9 1032 aaPredicted RBP15.32■□□□□ 0.04
PRPF40B-209ENST00000548825 GOLGA6L9A6NEM1 432 aa15.32■□□□□ 0.04
PRPF40B-209ENST00000548825 LDHCP07864 332 aa15.32■□□□□ 0.04
PRPF40B-209ENST00000548825 LMAN1P49257 510 aa15.32■□□□□ 0.04
PRPF40B-209ENST00000548825 NT5DC1Q5TFE4 455 aa15.32■□□□□ 0.04
PRPF40B-209ENST00000548825 RABEP2Q9H5N1 569 aa15.32■□□□□ 0.04
PRPF40B-209ENST00000548825 C6orf50Q9HD87 102 aa15.32■□□□□ 0.04
PRPF40B-209ENST00000548825 MRFAP1Q9Y605 127 aa15.32■□□□□ 0.04
PRPF40B-209ENST00000548825 FHOD1Q9Y613 1164 aa15.32■□□□□ 0.04
PRPF40B-209ENST00000548825 KRT18P05783 430 aaKnown RBP15.32■□□□□ 0.04
PRPF40B-209ENST00000548825 CXCR5P32302 372 aa15.32■□□□□ 0.04
PRPF40B-209ENST00000548825 GSPT2Q8IYD1 628 aaKnown RBP15.32■□□□□ 0.04
PRPF40B-209ENST00000548825 CCDC155Q8N6L0 562 aa15.32■□□□□ 0.04
PRPF40B-209ENST00000548825 TNFRSF25Q93038 417 aa15.32■□□□□ 0.04
PRPF40B-209ENST00000548825 TUBGCP2Q9BSJ2 902 aa15.32■□□□□ 0.04
PRPF40B-209ENST00000548825 NLRC4Q9NPP4 1024 aa15.32■□□□□ 0.04
PRPF40B-209ENST00000548825 MYH7P12883 1935 aa15.31■□□□□ 0.04
PRPF40B-209ENST00000548825 SASH3O75995 380 aa15.31■□□□□ 0.04
PRPF40B-209ENST00000548825 TERF2Q15554 542 aa15.31■□□□□ 0.04
PRPF40B-209ENST00000548825 TDRD12Q587J7 1177 aaKnown RBP15.31■□□□□ 0.04
PRPF40B-209ENST00000548825 REXO1Q8N1G1 1221 aaKnown RBP15.31■□□□□ 0.04
PRPF40B-209ENST00000548825 CALML4Q96GE6 196 aa15.31■□□□□ 0.04
PRPF40B-209ENST00000548825 LRWD1Q9UFC0 647 aa15.31■□□□□ 0.04
PRPF40B-209ENST00000548825 EPN1Q9Y6I3 576 aaPredicted RBP15.31■□□□□ 0.04
PRPF40B-209ENST00000548825 MYH13Q9UKX3 1938 aa15.31■□□□□ 0.04
PRPF40B-209ENST00000548825 OR52Z1P0C646 297 aa15.31■□□□□ 0.04
PRPF40B-209ENST00000548825 CYP26C1Q6V0L0 522 aa15.31■□□□□ 0.04
PRPF40B-209ENST00000548825 ZNF622Q969S3 477 aaKnown RBP eCLIP15.31■□□□□ 0.04
PRPF40B-209ENST00000548825 CTAGE15A4D2H0 777 aa15.3■□□□□ 0.04
PRPF40B-209ENST00000548825 CTAGE8P0CG41 777 aa15.3■□□□□ 0.04
PRPF40B-209ENST00000548825 GNAQP50148 359 aa15.3■□□□□ 0.04
PRPF40B-209ENST00000548825 ST5P78524 1137 aa15.3■□□□□ 0.04
PRPF40B-209ENST00000548825 GRAPQ13588 217 aa15.3■□□□□ 0.04
PRPF40B-209ENST00000548825 SMC1AQ14683 1233 aaKnown RBP15.3■□□□□ 0.04
PRPF40B-209ENST00000548825 E2F4Q16254 413 aa15.3■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 82.7 ms