RNA–Protein interactions for RNA: ENST00000545738.6

LIMS2-217, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 5 BASIC

Gene LIMS2, Length 1,730 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-217ENST00000545738 SPZ1Q9BXG8 430 aa18.94■□□□□ 0.62
LIMS2-217ENST00000545738 PORCNQ9H237 461 aa18.94■□□□□ 0.62
LIMS2-217ENST00000545738 RAVER2Q9HCJ3 691 aaKnown RBP18.94■□□□□ 0.62
LIMS2-217ENST00000545738 ECM2O94769 699 aaPredicted RBP18.93■□□□□ 0.62
LIMS2-217ENST00000545738 ERVK-9P63128 1117 aa18.93■□□□□ 0.62
LIMS2-217ENST00000545738 ERVK-24P63145 666 aa18.93■□□□□ 0.62
LIMS2-217ENST00000545738 CDC37Q16543 378 aaPredicted RBP18.93■□□□□ 0.62
LIMS2-217ENST00000545738 CPXCR1Q8N123 301 aa18.93■□□□□ 0.62
LIMS2-217ENST00000545738 SLKQ9H2G2 1235 aaPredicted RBP18.93■□□□□ 0.62
LIMS2-217ENST00000545738 RBM28Q9NW13 759 aaKnown RBP18.93■□□□□ 0.62
LIMS2-217ENST00000545738 SAGE1Q9NXZ1 904 aa18.93■□□□□ 0.62
LIMS2-217ENST00000545738 MORF4L1Q9UBU8 362 aa18.93■□□□□ 0.62
LIMS2-217ENST00000545738 FAM110CQ1W6H9 321 aa18.92■□□□□ 0.62
LIMS2-217ENST00000545738 QRICH1Q2TAL8 776 aa18.92■□□□□ 0.62
LIMS2-217ENST00000545738 HOMER1Q86YM7 354 aa18.92■□□□□ 0.62
LIMS2-217ENST00000545738 TMX3Q96JJ7 454 aa18.92■□□□□ 0.62
LIMS2-217ENST00000545738 ARHGAP39Q9C0H5 1083 aa18.92■□□□□ 0.62
LIMS2-217ENST00000545738 RABGAP1Q9Y3P9 1069 aa18.92■□□□□ 0.62
LIMS2-217ENST00000545738 FOXN1O15353 648 aa18.91■□□□□ 0.62
LIMS2-217ENST00000545738 GCLCP48506 637 aaPredicted RBP18.91■□□□□ 0.62
LIMS2-217ENST00000545738 SHISA4Q96DD7 197 aa18.91■□□□□ 0.62
LIMS2-217ENST00000545738 MOV10L1Q9BXT6 1211 aaKnown RBP18.91■□□□□ 0.62
LIMS2-217ENST00000545738 SPATC1LQ9H0A9 340 aa18.91■□□□□ 0.62
LIMS2-217ENST00000545738 MGAMO43451 1857 aa18.91■□□□□ 0.62
LIMS2-217ENST00000545738 DHX16O60231 1041 aaKnown RBP18.91■□□□□ 0.62
LIMS2-217ENST00000545738 CCDC83Q8IWF9 413 aa18.91■□□□□ 0.62
LIMS2-217ENST00000545738 GPR25O00155 361 aa18.9■□□□□ 0.62
LIMS2-217ENST00000545738 ATP2A1O14983 1001 aa18.9■□□□□ 0.62
LIMS2-217ENST00000545738 JAK2O60674 1132 aa18.9■□□□□ 0.62
LIMS2-217ENST00000545738 HSPA1AP0DMV8 641 aaKnown RBP18.9■□□□□ 0.62
LIMS2-217ENST00000545738 HSPA1BP0DMV9 641 aaKnown RBP18.9■□□□□ 0.62
LIMS2-217ENST00000545738 IFNAR1P17181 557 aa18.9■□□□□ 0.62
LIMS2-217ENST00000545738 PLS1Q14651 629 aa18.9■□□□□ 0.62
LIMS2-217ENST00000545738 PKN1Q16512 942 aa18.9■□□□□ 0.62
LIMS2-217ENST00000545738 MB21D1Q8N884 522 aa18.9■□□□□ 0.62
LIMS2-217ENST00000545738 EFCC1Q9HA90 598 aa18.9■□□□□ 0.62
LIMS2-217ENST00000545738 ZBTB5O15062 677 aa18.89■□□□□ 0.61
LIMS2-217ENST00000545738 SMARCA1P28370 1054 aa18.89■□□□□ 0.61
LIMS2-217ENST00000545738 GNAQP50148 359 aa18.89■□□□□ 0.61
LIMS2-217ENST00000545738 SNRNP48Q6IEG0 339 aaKnown RBP18.89■□□□□ 0.61
LIMS2-217ENST00000545738 TYW1BQ6NUM6 668 aa18.89■□□□□ 0.61
LIMS2-217ENST00000545738 GPRC5AQ8NFJ5 357 aa18.89■□□□□ 0.61
LIMS2-217ENST00000545738 V9GY48 417 aaPredicted RBP18.89■□□□□ 0.61
LIMS2-217ENST00000545738 CASP8AP2Q9UKL3 1982 aa18.89■□□□□ 0.61
LIMS2-217ENST00000545738 PLXNB2O15031 1838 aa18.89■□□□□ 0.61
LIMS2-217ENST00000545738 ZBED4O75132 1171 aa18.88■□□□□ 0.61
LIMS2-217ENST00000545738 ICAM1P05362 532 aa18.88■□□□□ 0.61
LIMS2-217ENST00000545738 STAT3P40763 770 aa18.88■□□□□ 0.61
LIMS2-217ENST00000545738 PPP2R5BQ15173 497 aa18.88■□□□□ 0.61
LIMS2-217ENST00000545738 USH1GQ495M9 461 aa18.88■□□□□ 0.61
LIMS2-217ENST00000545738 NSUN7Q8NE18 718 aaKnown RBP18.88■□□□□ 0.61
LIMS2-217ENST00000545738 ZNF296Q8WUU4 475 aaPredicted RBP18.88■□□□□ 0.61
LIMS2-217ENST00000545738 AIFM3Q96NN9 605 aa18.88■□□□□ 0.61
LIMS2-217ENST00000545738 LZTS2Q9BRK4 669 aa18.88■□□□□ 0.61
LIMS2-217ENST00000545738 CCDC196A0A1B0GTZ2 297 aa18.88■□□□□ 0.61
LIMS2-217ENST00000545738 OPLAHO14841 1288 aa18.88■□□□□ 0.61
LIMS2-217ENST00000545738 FDPSP14324 419 aaKnown RBP18.88■□□□□ 0.61
LIMS2-217ENST00000545738 ERCC3P19447 782 aa18.88■□□□□ 0.61
LIMS2-217ENST00000545738 SLC4A3P48751 1232 aa18.88■□□□□ 0.61
LIMS2-217ENST00000545738 MUM1L1Q5H9M0 696 aa18.88■□□□□ 0.61
LIMS2-217ENST00000545738 GTF3C2Q8WUA4 911 aaPredicted RBP18.88■□□□□ 0.61
LIMS2-217ENST00000545738 GPKOWQ92917 476 aaPredicted RBP eCLIP18.88■□□□□ 0.61
LIMS2-217ENST00000545738 SNX21Q969T3 373 aa18.88■□□□□ 0.61
LIMS2-217ENST00000545738 COA7Q96BR5 231 aa18.88■□□□□ 0.61
LIMS2-217ENST00000545738 BEGAINQ9BUH8 593 aa18.88■□□□□ 0.61
LIMS2-217ENST00000545738 TEX13BQ9BXU2 312 aa18.88■□□□□ 0.61
LIMS2-217ENST00000545738 HOMER2Q9NSB8 354 aa18.88■□□□□ 0.61
LIMS2-217ENST00000545738 LCTP09848 1927 aa18.87■□□□□ 0.61
LIMS2-217ENST00000545738 HSPA8P11142 646 aaKnown RBP18.87■□□□□ 0.61
LIMS2-217ENST00000545738 OAZ1P54368 228 aa18.87■□□□□ 0.61
LIMS2-217ENST00000545738 LACTBP83111 547 aaPredicted RBP18.87■□□□□ 0.61
LIMS2-217ENST00000545738 RIOX2Q8IUF8 465 aa18.87■□□□□ 0.61
LIMS2-217ENST00000545738 ZSCAN31Q96LW9 406 aaPredicted RBP18.87■□□□□ 0.61
LIMS2-217ENST00000545738 SLC26A6Q9BXS9 759 aa18.87■□□□□ 0.61
LIMS2-217ENST00000545738 SH2B1Q9NRF2 756 aaPredicted RBP18.87■□□□□ 0.61
LIMS2-217ENST00000545738 CCPG1Q9ULG6 757 aa18.87■□□□□ 0.61
LIMS2-217ENST00000545738 PNMA6FA0A0J9YX94 578 aa18.86■□□□□ 0.61
LIMS2-217ENST00000545738 FDX1P10109 184 aa18.86■□□□□ 0.61
LIMS2-217ENST00000545738 SP3Q02447 781 aa18.86■□□□□ 0.61
LIMS2-217ENST00000545738 WWC2Q6AWC2 1192 aa18.86■□□□□ 0.61
LIMS2-217ENST00000545738 CLEC4DQ8WXI8 215 aa18.86■□□□□ 0.61
LIMS2-217ENST00000545738 RRP36Q96EU6 259 aaKnown RBP18.86■□□□□ 0.61
LIMS2-217ENST00000545738 NFIBO00712 420 aa18.86■□□□□ 0.61
LIMS2-217ENST00000545738 CPLX1O14810 134 aa18.86■□□□□ 0.61
LIMS2-217ENST00000545738 ADAMTS3O15072 1205 aa18.86■□□□□ 0.61
LIMS2-217ENST00000545738 PRPF3O43395 683 aaKnown RBP18.86■□□□□ 0.61
LIMS2-217ENST00000545738 FMNL1O95466 1100 aaPredicted RBP18.86■□□□□ 0.61
LIMS2-217ENST00000545738 ALAS1P13196 640 aa18.86■□□□□ 0.61
LIMS2-217ENST00000545738 CD99L2Q8TCZ2 262 aa18.86■□□□□ 0.61
LIMS2-217ENST00000545738 TRIM47Q96LD4 638 aa18.86■□□□□ 0.61
LIMS2-217ENST00000545738 RNF26Q9BY78 433 aaPredicted RBP18.86■□□□□ 0.61
LIMS2-217ENST00000545738 PTPDC1A2A3K4 754 aa18.85■□□□□ 0.61
LIMS2-217ENST00000545738 MCM2P49736 904 aa18.85■□□□□ 0.61
LIMS2-217ENST00000545738 NOM1Q5C9Z4 860 aaKnown RBP18.85■□□□□ 0.61
LIMS2-217ENST00000545738 NCAPG2Q86XI2 1143 aa18.85■□□□□ 0.61
LIMS2-217ENST00000545738 FBXO11Q86XK2 927 aa18.85■□□□□ 0.61
LIMS2-217ENST00000545738 IL27Q8NEV9 243 aa18.85■□□□□ 0.61
LIMS2-217ENST00000545738 TBC1D5Q92609 795 aa18.85■□□□□ 0.61
LIMS2-217ENST00000545738 DDX11Q96FC9 970 aa18.85■□□□□ 0.61
LIMS2-217ENST00000545738 GJB4Q9NTQ9 266 aa18.85■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms