RNA–Protein interactions for RNA: ENST00000544738.5

DDX55-212, Transcript of DEAD-box helicase 55, humanhuman

TSL 5

Gene DDX55, Length 956 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-212ENST00000544738 HCN4Q9Y3Q4 1203 aa19.3■□□□□ 0.68
DDX55-212ENST00000544738 REV3LO60673 3130 aa19.3■□□□□ 0.68
DDX55-212ENST00000544738 SALL3Q9BXA9 1300 aa19.29■□□□□ 0.68
DDX55-212ENST00000544738 ADAMTS4O75173 837 aa19.29■□□□□ 0.68
DDX55-212ENST00000544738 ZNF865P0CJ78 1059 aaPredicted RBP19.29■□□□□ 0.68
DDX55-212ENST00000544738 SKIV2LQ15477 1246 aaKnown RBP19.29■□□□□ 0.68
DDX55-212ENST00000544738 ZNF444Q8N0Y2 327 aaPredicted RBP19.29■□□□□ 0.68
DDX55-212ENST00000544738 LRFN3Q9BTN0 628 aa19.29■□□□□ 0.68
DDX55-212ENST00000544738 GNL3Q9BVP2 549 aaKnown RBP eCLIP19.29■□□□□ 0.68
DDX55-212ENST00000544738 PPP1R12CQ9BZL4 782 aa19.29■□□□□ 0.68
DDX55-212ENST00000544738 CNPY2Q9Y2B0 182 aa19.29■□□□□ 0.68
DDX55-212ENST00000544738 PLXNA1Q9UIW2 1896 aa19.28■□□□□ 0.68
DDX55-212ENST00000544738 RAD21O60216 631 aa19.28■□□□□ 0.68
DDX55-212ENST00000544738 SLC25A27O95847 323 aa19.28■□□□□ 0.68
DDX55-212ENST00000544738 SLC3A2P08195 630 aaKnown RBP19.28■□□□□ 0.68
DDX55-212ENST00000544738 KCTD2Q14681 263 aa19.28■□□□□ 0.68
DDX55-212ENST00000544738 TMEM132BQ14DG7 1078 aa19.28■□□□□ 0.68
DDX55-212ENST00000544738 STK11IPQ8N1F8 1099 aa19.28■□□□□ 0.68
DDX55-212ENST00000544738 EVI5LQ96CN4 794 aa19.28■□□□□ 0.68
DDX55-212ENST00000544738 NAPBQ9H115 298 aa19.28■□□□□ 0.68
DDX55-212ENST00000544738 EPHX3Q9H6B9 360 aa19.28■□□□□ 0.68
DDX55-212ENST00000544738 ADAMTS5Q9UNA0 930 aa19.28■□□□□ 0.68
DDX55-212ENST00000544738 MOXD2PA6NHM9 499 aa19.27■□□□□ 0.68
DDX55-212ENST00000544738 KCNQ1P51787 676 aa19.27■□□□□ 0.68
DDX55-212ENST00000544738 PDE4BQ07343 736 aa19.27■□□□□ 0.68
DDX55-212ENST00000544738 ZNF792Q3KQV3 632 aa19.27■□□□□ 0.68
DDX55-212ENST00000544738 PSRC1Q6PGN9 363 aaPredicted RBP19.27■□□□□ 0.68
DDX55-212ENST00000544738 TICAM2Q86XR7 235 aa19.27■□□□□ 0.68
DDX55-212ENST00000544738 GLT1D1Q96MS3 346 aa19.27■□□□□ 0.68
DDX55-212ENST00000544738 SEC62Q99442 399 aaKnown RBP19.27■□□□□ 0.68
DDX55-212ENST00000544738 ZNF236Q9UL36 1845 aa19.27■□□□□ 0.68
DDX55-212ENST00000544738 SYNRGQ9UMZ2 1314 aa19.26■□□□□ 0.67
DDX55-212ENST00000544738 A0A0G2JMZ2 1700 aa19.26■□□□□ 0.67
DDX55-212ENST00000544738 PDE1AP54750 535 aa19.26■□□□□ 0.67
DDX55-212ENST00000544738 AAK1Q2M2I8 961 aa19.26■□□□□ 0.67
DDX55-212ENST00000544738 FAM83BQ5T0W9 1011 aa19.26■□□□□ 0.67
DDX55-212ENST00000544738 KLHDC9Q8NEP7 349 aa19.26■□□□□ 0.67
DDX55-212ENST00000544738 RWDD1Q9H446 243 aaPredicted RBP19.26■□□□□ 0.67
DDX55-212ENST00000544738 FAM184BQ9ULE4 1060 aa19.26■□□□□ 0.67
DDX55-212ENST00000544738 PPP1R9AQ9ULJ8 1098 aa19.26■□□□□ 0.67
DDX55-212ENST00000544738 SYNPO2Q9UMS6 1093 aa19.26■□□□□ 0.67
DDX55-212ENST00000544738 DIS3Q9Y2L1 958 aaKnown RBP19.26■□□□□ 0.67
DDX55-212ENST00000544738 YBX2Q9Y2T7 364 aaKnown RBP19.26■□□□□ 0.67
DDX55-212ENST00000544738 ARIH1Q9Y4X5 557 aaPredicted RBP19.26■□□□□ 0.67
DDX55-212ENST00000544738 MROH7Q68CQ1 1323 aa19.25■□□□□ 0.67
DDX55-212ENST00000544738 SYNGAP1Q96PV0 1343 aa19.25■□□□□ 0.67
DDX55-212ENST00000544738 PIEZO1Q92508 2521 aa19.25■□□□□ 0.67
DDX55-212ENST00000544738 F5H6K3 240 aa19.25■□□□□ 0.67
DDX55-212ENST00000544738 VWA5AO00534 786 aa19.25■□□□□ 0.67
DDX55-212ENST00000544738 PRDM1O75626 825 aa19.25■□□□□ 0.67
DDX55-212ENST00000544738 FGBP02675 491 aa19.25■□□□□ 0.67
DDX55-212ENST00000544738 CYP2C18P33260 490 aa19.25■□□□□ 0.67
DDX55-212ENST00000544738 COPB2P35606 906 aa19.25■□□□□ 0.67
DDX55-212ENST00000544738 CDK7P50613 346 aa19.25■□□□□ 0.67
DDX55-212ENST00000544738 IRX5P78411 483 aaPredicted RBP19.25■□□□□ 0.67
DDX55-212ENST00000544738 KLRC3Q07444 240 aa19.25■□□□□ 0.67
DDX55-212ENST00000544738 CLIP2Q9UDT6 1046 aa19.25■□□□□ 0.67
DDX55-212ENST00000544738 GREB1LQ9C091 1923 aaPredicted RBP19.25■□□□□ 0.67
DDX55-212ENST00000544738 ELP1O95163 1332 aa19.25■□□□□ 0.67
DDX55-212ENST00000544738 IGKV6D-41A0A0C4DH26 115 aa19.24■□□□□ 0.67
DDX55-212ENST00000544738 MYADML2A6NDP7 307 aa19.24■□□□□ 0.67
DDX55-212ENST00000544738 STAT3P40763 770 aa19.24■□□□□ 0.67
DDX55-212ENST00000544738 RABGGTBP53611 331 aa19.24■□□□□ 0.67
DDX55-212ENST00000544738 PPARAQ07869 468 aa19.24■□□□□ 0.67
DDX55-212ENST00000544738 TMEM31Q5JXX7 168 aa19.24■□□□□ 0.67
DDX55-212ENST00000544738 CCSAPQ6IQ19 270 aaPredicted RBP19.24■□□□□ 0.67
DDX55-212ENST00000544738 HERVK_113Q902F9 699 aa19.24■□□□□ 0.67
DDX55-212ENST00000544738 MKL1Q969V6 931 aa19.24■□□□□ 0.67
DDX55-212ENST00000544738 MTIF3Q9H2K0 278 aaKnown RBP19.24■□□□□ 0.67
DDX55-212ENST00000544738 IL23AQ9NPF7 189 aa19.24■□□□□ 0.67
DDX55-212ENST00000544738 FBXO28Q9NVF7 368 aa19.24■□□□□ 0.67
DDX55-212ENST00000544738 MTMR4Q9NYA4 1195 aa19.24■□□□□ 0.67
DDX55-212ENST00000544738 ZHX1Q9UKY1 873 aaPredicted RBP19.24■□□□□ 0.67
DDX55-212ENST00000544738 ZNFX1Q9P2E3 1918 aaKnown RBP19.23■□□□□ 0.67
DDX55-212ENST00000544738 ARVCFO00192 962 aa19.23■□□□□ 0.67
DDX55-212ENST00000544738 TLR3O15455 904 aaKnown RBP19.23■□□□□ 0.67
DDX55-212ENST00000544738 TTLL1O95922 423 aa19.23■□□□□ 0.67
DDX55-212ENST00000544738 ASGR1P07306 291 aa19.23■□□□□ 0.67
DDX55-212ENST00000544738 C6orf222P0C671 652 aaPredicted RBP19.23■□□□□ 0.67
DDX55-212ENST00000544738 TSPY3P0CV98 308 aa19.23■□□□□ 0.67
DDX55-212ENST00000544738 TSPY8P0CW00 308 aa19.23■□□□□ 0.67
DDX55-212ENST00000544738 PPP4R3BQ5MIZ7 849 aa19.23■□□□□ 0.67
DDX55-212ENST00000544738 OTOP2Q7RTS6 562 aa19.23■□□□□ 0.67
DDX55-212ENST00000544738 RIOX2Q8IUF8 465 aa19.23■□□□□ 0.67
DDX55-212ENST00000544738 PRPF38AQ8NAV1 312 aaKnown RBP19.23■□□□□ 0.67
DDX55-212ENST00000544738 NEDD1Q8NHV4 660 aa19.23■□□□□ 0.67
DDX55-212ENST00000544738 SLF1Q9BQI6 1058 aa19.23■□□□□ 0.67
DDX55-212ENST00000544738 HELLSQ9NRZ9 838 aa19.23■□□□□ 0.67
DDX55-212ENST00000544738 NDUFB10O96000 172 aa19.22■□□□□ 0.67
DDX55-212ENST00000544738 PPP2R2DQ66LE6 453 aa19.22■□□□□ 0.67
DDX55-212ENST00000544738 SMC5Q8IY18 1101 aa19.22■□□□□ 0.67
DDX55-212ENST00000544738 PCSK9Q8NBP7 692 aaKnown RBP19.22■□□□□ 0.67
DDX55-212ENST00000544738 CEP95Q96GE4 821 aa19.22■□□□□ 0.67
DDX55-212ENST00000544738 PARP14Q460N5 1801 aa19.22■□□□□ 0.67
DDX55-212ENST00000544738 PLIN4Q96Q06 1357 aa19.21■□□□□ 0.67
DDX55-212ENST00000544738 A0A0U1RQG5 324 aaPredicted RBP19.21■□□□□ 0.67
DDX55-212ENST00000544738 DUSP11O75319 330 aaKnown RBP19.21■□□□□ 0.67
DDX55-212ENST00000544738 SNAI1O95863 264 aaPredicted RBP19.21■□□□□ 0.67
DDX55-212ENST00000544738 MYOGP15173 224 aa19.21■□□□□ 0.67
DDX55-212ENST00000544738 TFAP4Q01664 338 aa19.21■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms