RNA–Protein interactions for RNA: ENST00000543949.2

COMMD5-207, Transcript of COMM domain containing 5, humanhuman

APPRIS P1 TSL 3 BASIC

Gene COMMD5, Length 1,571 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD5-207ENST00000543949 PCDHA4Q9UN74 947 aa24.35■■□□□ 1.49
COMMD5-207ENST00000543949 PARP14Q460N5 1801 aa24.35■■□□□ 1.49
COMMD5-207ENST00000543949 LOC285556D6RIA3 1793 aa24.35■■□□□ 1.49
COMMD5-207ENST00000543949 ITGBL1O95965 494 aaPredicted RBP24.34■■□□□ 1.49
COMMD5-207ENST00000543949 FBXO11Q86XK2 927 aa24.34■■□□□ 1.49
COMMD5-207ENST00000543949 BLIDQ8IZY5 108 aa24.34■■□□□ 1.49
COMMD5-207ENST00000543949 OPTNQ96CV9 577 aa24.34■■□□□ 1.49
COMMD5-207ENST00000543949 RANBP17Q9H2T7 1088 aaKnown RBP24.34■■□□□ 1.49
COMMD5-207ENST00000543949 SMCO2A6NFE2 343 aa24.33■■□□□ 1.49
COMMD5-207ENST00000543949 CXCL11O14625 94 aa24.33■■□□□ 1.49
COMMD5-207ENST00000543949 PPP1R11O60927 126 aaPredicted RBP24.33■■□□□ 1.49
COMMD5-207ENST00000543949 FLOT1O75955 427 aa24.33■■□□□ 1.49
COMMD5-207ENST00000543949 NPY5RQ15761 445 aa24.33■■□□□ 1.49
COMMD5-207ENST00000543949 CSPP1Q1MSJ5 1256 aa24.33■■□□□ 1.49
COMMD5-207ENST00000543949 MYSM1Q5VVJ2 828 aa24.33■■□□□ 1.49
COMMD5-207ENST00000543949 SAMD1Q6SPF0 538 aaPredicted RBP24.33■■□□□ 1.49
COMMD5-207ENST00000543949 OXER1Q8TDS5 423 aa24.33■■□□□ 1.49
COMMD5-207ENST00000543949 CFAP45Q9UL16 551 aa24.33■■□□□ 1.49
COMMD5-207ENST00000543949 CNPY2Q9Y2B0 182 aa24.33■■□□□ 1.49
COMMD5-207ENST00000543949 IRF6O14896 467 aa24.33■■□□□ 1.48
COMMD5-207ENST00000543949 PTMSP20962 102 aa24.33■■□□□ 1.48
COMMD5-207ENST00000543949 NR5A1Q13285 461 aa24.33■■□□□ 1.48
COMMD5-207ENST00000543949 BICD2Q8TD16 824 aa24.33■■□□□ 1.48
COMMD5-207ENST00000543949 KCNH4Q9UQ05 1017 aa24.33■■□□□ 1.48
COMMD5-207ENST00000543949 PCDHA1Q9Y5I3 950 aa24.33■■□□□ 1.48
COMMD5-207ENST00000543949 FDX1P10109 184 aa24.32■■□□□ 1.48
COMMD5-207ENST00000543949 SNAP25P60880 206 aa24.32■■□□□ 1.48
COMMD5-207ENST00000543949 PPP1R9AQ9ULJ8 1098 aa24.32■■□□□ 1.48
COMMD5-207ENST00000543949 A0A0G2JLL6 359 aaPredicted RBP24.31■■□□□ 1.48
COMMD5-207ENST00000543949 ADCY7P51828 1080 aa24.31■■□□□ 1.48
COMMD5-207ENST00000543949 PRRT2Q7Z6L0 340 aaPredicted RBP24.31■■□□□ 1.48
COMMD5-207ENST00000543949 PROCA1Q8NCQ7 364 aaPredicted RBP24.31■■□□□ 1.48
COMMD5-207ENST00000543949 SCAND2PQ9GZW5 306 aaPredicted RBP24.31■■□□□ 1.48
COMMD5-207ENST00000543949 GLT8D2Q9H1C3 349 aa24.31■■□□□ 1.48
COMMD5-207ENST00000543949 USP17L15C9J2P7 530 aa24.3■■□□□ 1.48
COMMD5-207ENST00000543949 USP17L13C9JLJ4 530 aa24.3■■□□□ 1.48
COMMD5-207ENST00000543949 USP17L11C9JVI0 530 aa24.3■■□□□ 1.48
COMMD5-207ENST00000543949 USP17L18D6R9N7 530 aa24.3■■□□□ 1.48
COMMD5-207ENST00000543949 USP17L22D6RA61 530 aa24.3■■□□□ 1.48
COMMD5-207ENST00000543949 USP17L17D6RBQ6 530 aa24.3■■□□□ 1.48
COMMD5-207ENST00000543949 USP17L19D6RCP7 530 aa24.3■■□□□ 1.48
COMMD5-207ENST00000543949 USP17L20D6RJB6 530 aa24.3■■□□□ 1.48
COMMD5-207ENST00000543949 FIBPO43427 364 aa24.3■■□□□ 1.48
COMMD5-207ENST00000543949 USP17L24Q0WX57 530 aa24.3■■□□□ 1.48
COMMD5-207ENST00000543949 TFIP11Q9UBB9 837 aaKnown RBP24.3■■□□□ 1.48
COMMD5-207ENST00000543949 CTDP1Q9Y5B0 961 aaPredicted RBP24.3■■□□□ 1.48
COMMD5-207ENST00000543949 USH1GQ495M9 461 aa24.29■■□□□ 1.48
COMMD5-207ENST00000543949 RILPL1Q5EBL4 403 aa24.29■■□□□ 1.48
COMMD5-207ENST00000543949 CCDC174Q6PII3 467 aa24.29■■□□□ 1.48
COMMD5-207ENST00000543949 GADL1Q6ZQY3 521 aa24.29■■□□□ 1.48
COMMD5-207ENST00000543949 CATSPERGQ6ZRH7 1159 aa24.29■■□□□ 1.48
COMMD5-207ENST00000543949 CUL5Q93034 780 aa24.29■■□□□ 1.48
COMMD5-207ENST00000543949 TNFRSF25Q93038 417 aa24.29■■□□□ 1.48
COMMD5-207ENST00000543949 MRPL12P52815 198 aaKnown RBP24.29■■□□□ 1.48
COMMD5-207ENST00000543949 GDPD2Q9HCC8 539 aa24.29■■□□□ 1.48
COMMD5-207ENST00000543949 RIC8AQ9NPQ8 531 aa24.29■■□□□ 1.48
COMMD5-207ENST00000543949 NOL7Q9UMY1 257 aaKnown RBP24.29■■□□□ 1.48
COMMD5-207ENST00000543949 RLFQ13129 1914 aa24.28■■□□□ 1.48
COMMD5-207ENST00000543949 MYPNQ86TC9 1320 aa24.28■■□□□ 1.48
COMMD5-207ENST00000543949 CCDC194A0A1B0GVG4 234 aa24.28■■□□□ 1.48
COMMD5-207ENST00000543949 ZBED4O75132 1171 aa24.28■■□□□ 1.48
COMMD5-207ENST00000543949 COG2Q14746 738 aa24.28■■□□□ 1.48
COMMD5-207ENST00000543949 CST9Q5W186 159 aa24.28■■□□□ 1.48
COMMD5-207ENST00000543949 REXO1Q8N1G1 1221 aaKnown RBP24.28■■□□□ 1.48
COMMD5-207ENST00000543949 SPATA32Q96LK8 384 aa24.28■■□□□ 1.48
COMMD5-207ENST00000543949 USP28Q96RU2 1077 aa24.28■■□□□ 1.48
COMMD5-207ENST00000543949 PNMA2Q9UL42 364 aa24.28■■□□□ 1.48
COMMD5-207ENST00000543949 M0R2N6 131 aa24.27■■□□□ 1.48
COMMD5-207ENST00000543949 KIF3CO14782 793 aa24.27■■□□□ 1.48
COMMD5-207ENST00000543949 SNAPC2Q13487 334 aa24.27■■□□□ 1.48
COMMD5-207ENST00000543949 FASTKD5Q7L8L6 764 aaKnown RBP24.27■■□□□ 1.48
COMMD5-207ENST00000543949 TMEM87AQ8NBN3 555 aa24.27■■□□□ 1.48
COMMD5-207ENST00000543949 PSTPIP2Q9H939 334 aa24.27■■□□□ 1.48
COMMD5-207ENST00000543949 SLC38A10Q9HBR0 1119 aa24.27■■□□□ 1.48
COMMD5-207ENST00000543949 PCDHA6Q9UN73 950 aa24.27■■□□□ 1.48
COMMD5-207ENST00000543949 PCDHA8Q9Y5H6 950 aa24.27■■□□□ 1.48
COMMD5-207ENST00000543949 PRPF40AO75400 957 aaKnown RBP24.26■■□□□ 1.47
COMMD5-207ENST00000543949 ICAM1P05362 532 aa24.26■■□□□ 1.47
COMMD5-207ENST00000543949 DSG3P32926 999 aa24.26■■□□□ 1.47
COMMD5-207ENST00000543949 PIK3AP1Q6ZUJ8 805 aa24.26■■□□□ 1.47
COMMD5-207ENST00000543949 KRT25Q7Z3Z0 450 aa24.26■■□□□ 1.47
COMMD5-207ENST00000543949 SMC1BQ8NDV3 1235 aa24.26■■□□□ 1.47
COMMD5-207ENST00000543949 WNK4Q96J92 1243 aa24.26■■□□□ 1.47
COMMD5-207ENST00000543949 POLR3EQ9NVU0 708 aa24.26■■□□□ 1.47
COMMD5-207ENST00000543949 HOXC10Q9NYD6 342 aa24.26■■□□□ 1.47
COMMD5-207ENST00000543949 ABCB11O95342 1321 aa24.26■■□□□ 1.47
COMMD5-207ENST00000543949 GJA5P36382 358 aa24.25■■□□□ 1.47
COMMD5-207ENST00000543949 CEBPZQ03701 1054 aaKnown RBP24.25■■□□□ 1.47
COMMD5-207ENST00000543949 TREML2Q5T2D2 321 aa24.25■■□□□ 1.47
COMMD5-207ENST00000543949 RASGRP4Q8TDF6 673 aa24.25■■□□□ 1.47
COMMD5-207ENST00000543949 ATG4CQ96DT6 458 aa24.25■■□□□ 1.47
COMMD5-207ENST00000543949 RTEL1Q9NZ71 1219 aa24.25■■□□□ 1.47
COMMD5-207ENST00000543949 CCPG1Q9ULG6 757 aa24.25■■□□□ 1.47
COMMD5-207ENST00000543949 MRPL11Q9Y3B7 192 aaKnown RBP24.25■■□□□ 1.47
COMMD5-207ENST00000543949 COL11A1P12107 1806 aaPredicted RBP24.25■■□□□ 1.47
COMMD5-207ENST00000543949 ELP1O95163 1332 aa24.25■■□□□ 1.47
COMMD5-207ENST00000543949 VWA5AO00534 786 aa24.25■■□□□ 1.47
COMMD5-207ENST00000543949 ADAMTS3O15072 1205 aa24.25■■□□□ 1.47
COMMD5-207ENST00000543949 HOXA7P31268 230 aaPredicted RBP24.25■■□□□ 1.47
COMMD5-207ENST00000543949 PABPC4Q13310 644 aaKnown RBP eCLIP24.25■■□□□ 1.474e-7■■■□□ 17.1
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms