RNA–Protein interactions for RNA: ENST00000542772.1

ABCF1-207, Transcript of ATP binding cassette subfamily F member 1, humanhuman

TSL 3

Gene ABCF1, Length 223 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF1-207ENST00000542772 PFKFB3Q16875 520 aaPredicted RBP6.8□□□□□ -1.32
ABCF1-207ENST00000542772 CCDC96Q2M329 555 aa6.8□□□□□ -1.32
ABCF1-207ENST00000542772 DHX30Q7L2E3 1194 aaKnown RBP eCLIP6.8□□□□□ -1.32
ABCF1-207ENST00000542772 RIOX2Q8IUF8 465 aa6.8□□□□□ -1.32
ABCF1-207ENST00000542772 TEX2Q8IWB9 1127 aa6.8□□□□□ -1.32
ABCF1-207ENST00000542772 CCDC83Q8IWF9 413 aa6.8□□□□□ -1.32
ABCF1-207ENST00000542772 CCDC82Q8N4S0 544 aa6.8□□□□□ -1.32
ABCF1-207ENST00000542772 SAMD3Q8N6K7 520 aa6.8□□□□□ -1.32
ABCF1-207ENST00000542772 PHKBQ93100 1093 aa6.8□□□□□ -1.32
ABCF1-207ENST00000542772 KIFC2Q96AC6 838 aa6.8□□□□□ -1.32
ABCF1-207ENST00000542772 PIGSQ96S52 555 aa6.8□□□□□ -1.32
ABCF1-207ENST00000542772 TANGO6Q9C0B7 1094 aa6.8□□□□□ -1.32
ABCF1-207ENST00000542772 ZFYVE28Q9HCC9 887 aa6.8□□□□□ -1.32
ABCF1-207ENST00000542772 SH3GLB2Q9NR46 395 aa6.8□□□□□ -1.32
ABCF1-207ENST00000542772 RNF186Q9NXI6 227 aa6.8□□□□□ -1.32
ABCF1-207ENST00000542772 MAP3K20Q9NYL2 800 aaKnown RBP6.8□□□□□ -1.32
ABCF1-207ENST00000542772 BTBD7Q9P203 1132 aa6.8□□□□□ -1.32
ABCF1-207ENST00000542772 BAZ2BQ9UIF8 2168 aaKnown RBP6.8□□□□□ -1.32
ABCF1-207ENST00000542772 ZSCAN21Q9Y5A6 473 aaPredicted RBP6.8□□□□□ -1.32
ABCF1-207ENST00000542772 THSD7BQ9C0I4 1608 aa6.79□□□□□ -1.32
ABCF1-207ENST00000542772 COL11A1P12107 1806 aaPredicted RBP6.79□□□□□ -1.32
ABCF1-207ENST00000542772 hCG_1984214I3L0E3 225 aa6.79□□□□□ -1.32
ABCF1-207ENST00000542772 PPP1R11O60927 126 aaPredicted RBP6.79□□□□□ -1.32
ABCF1-207ENST00000542772 SLC25A27O95847 323 aa6.79□□□□□ -1.32
ABCF1-207ENST00000542772 PDIA4P13667 645 aaKnown RBP6.79□□□□□ -1.32
ABCF1-207ENST00000542772 STAT3P40763 770 aa6.79□□□□□ -1.32
ABCF1-207ENST00000542772 IRX3P78415 501 aaPredicted RBP6.79□□□□□ -1.32
ABCF1-207ENST00000542772 MAP2K1Q02750 393 aaPredicted RBP6.79□□□□□ -1.32
ABCF1-207ENST00000542772 BECN1Q14457 450 aa6.79□□□□□ -1.32
ABCF1-207ENST00000542772 TAF1CQ15572 869 aaPredicted RBP6.79□□□□□ -1.32
ABCF1-207ENST00000542772 CDC37Q16543 378 aaPredicted RBP6.79□□□□□ -1.32
ABCF1-207ENST00000542772 FAM110CQ1W6H9 321 aa6.79□□□□□ -1.32
ABCF1-207ENST00000542772 QRICH1Q2TAL8 776 aa6.79□□□□□ -1.32
ABCF1-207ENST00000542772 TKFCQ3LXA3 575 aa6.79□□□□□ -1.32
ABCF1-207ENST00000542772 PAXIP1Q6ZW49 1069 aaPredicted RBP6.79□□□□□ -1.32
ABCF1-207ENST00000542772 NOL8Q76FK4 1167 aaKnown RBP6.79□□□□□ -1.32
ABCF1-207ENST00000542772 FBXO11Q86XK2 927 aa6.79□□□□□ -1.32
ABCF1-207ENST00000542772 HSCBQ8IWL3 235 aa6.79□□□□□ -1.32
ABCF1-207ENST00000542772 ZNF713Q8N859 430 aaPredicted RBP6.79□□□□□ -1.32
ABCF1-207ENST00000542772 JMYQ8N9B5 988 aa6.79□□□□□ -1.32
ABCF1-207ENST00000542772 SHCBP1Q8NEM2 672 aa6.79□□□□□ -1.32
ABCF1-207ENST00000542772 GPRC5AQ8NFJ5 357 aa6.79□□□□□ -1.32
ABCF1-207ENST00000542772 RRP36Q96EU6 259 aaKnown RBP6.79□□□□□ -1.32
ABCF1-207ENST00000542772 PARK7Q99497 189 aaKnown RBP6.79□□□□□ -1.32
ABCF1-207ENST00000542772 AMNQ9BXJ7 453 aa6.79□□□□□ -1.32
ABCF1-207ENST00000542772 CWC22Q9HCG8 908 aaKnown RBP6.79□□□□□ -1.32
ABCF1-207ENST00000542772 TXNRD2Q9NNW7 524 aa6.79□□□□□ -1.32
ABCF1-207ENST00000542772 WBP1LQ9NX94 342 aa6.79□□□□□ -1.32
ABCF1-207ENST00000542772 SAGE1Q9NXZ1 904 aa6.79□□□□□ -1.32
ABCF1-207ENST00000542772 BARHL2Q9NY43 387 aa6.79□□□□□ -1.32
ABCF1-207ENST00000542772 NAP1L2Q9ULW6 460 aaPredicted RBP6.79□□□□□ -1.32
ABCF1-207ENST00000542772 RIPK3Q9Y572 518 aa6.79□□□□□ -1.32
ABCF1-207ENST00000542772 A0A0G2JMZ2 1700 aa6.79□□□□□ -1.32
ABCF1-207ENST00000542772 ESYT2A0FGR8 921 aa6.78□□□□□ -1.32
ABCF1-207ENST00000542772 OPLAHO14841 1288 aa6.78□□□□□ -1.32
ABCF1-207ENST00000542772 STRNO43815 780 aa6.78□□□□□ -1.32
ABCF1-207ENST00000542772 JAK2O60674 1132 aa6.78□□□□□ -1.32
ABCF1-207ENST00000542772 SCG2P13521 617 aa6.78□□□□□ -1.32
ABCF1-207ENST00000542772 COPB2P35606 906 aa6.78□□□□□ -1.32
ABCF1-207ENST00000542772 SNAP25P60880 206 aa6.78□□□□□ -1.32
ABCF1-207ENST00000542772 ERVK-9P63128 1117 aa6.78□□□□□ -1.32
ABCF1-207ENST00000542772 ERVK-24P63145 666 aa6.78□□□□□ -1.32
ABCF1-207ENST00000542772 AKAP17AQ02040 695 aaKnown RBP6.78□□□□□ -1.32
ABCF1-207ENST00000542772 IKQ13123 557 aaPredicted RBP6.78□□□□□ -1.32
ABCF1-207ENST00000542772 CRHR2Q13324 411 aa6.78□□□□□ -1.32
ABCF1-207ENST00000542772 TRIM22Q8IYM9 498 aa6.78□□□□□ -1.32
ABCF1-207ENST00000542772 CHST13Q8NET6 341 aa6.78□□□□□ -1.32
ABCF1-207ENST00000542772 CLEC4DQ8WXI8 215 aa6.78□□□□□ -1.32
ABCF1-207ENST00000542772 WASF1Q92558 559 aa6.78□□□□□ -1.32
ABCF1-207ENST00000542772 COA7Q96BR5 231 aa6.78□□□□□ -1.32
ABCF1-207ENST00000542772 SHISA4Q96DD7 197 aa6.78□□□□□ -1.32
ABCF1-207ENST00000542772 AGBL1Q96MI9 1066 aa6.78□□□□□ -1.32
ABCF1-207ENST00000542772 SLC26A6Q9BXS9 759 aa6.78□□□□□ -1.32
ABCF1-207ENST00000542772 MOV10L1Q9BXT6 1211 aaKnown RBP6.78□□□□□ -1.32
ABCF1-207ENST00000542772 TEX13BQ9BXU2 312 aa6.78□□□□□ -1.32
ABCF1-207ENST00000542772 SPATC1LQ9H0A9 340 aa6.78□□□□□ -1.32
ABCF1-207ENST00000542772 ZMYND12Q9H0C1 365 aa6.78□□□□□ -1.32
ABCF1-207ENST00000542772 R3HDMLQ9H3Y0 253 aa6.78□□□□□ -1.32
ABCF1-207ENST00000542772 MROH8Q9H579 483 aa6.78□□□□□ -1.32
ABCF1-207ENST00000542772 RAVER2Q9HCJ3 691 aaKnown RBP6.78□□□□□ -1.32
ABCF1-207ENST00000542772 ORC3Q9UBD5 711 aaPredicted RBP6.78□□□□□ -1.32
ABCF1-207ENST00000542772 PCDHA1Q9Y5I3 950 aa6.78□□□□□ -1.32
ABCF1-207ENST00000542772 PCNTO95613 3336 aa6.78□□□□□ -1.32
ABCF1-207ENST00000542772 MYH6P13533 1939 aa6.78□□□□□ -1.32
ABCF1-207ENST00000542772 ABCB11O95342 1321 aa6.77□□□□□ -1.32
ABCF1-207ENST00000542772 hCG_1642624A0A1W2PR95 340 aa6.77□□□□□ -1.33
ABCF1-207ENST00000542772 PTPDC1A2A3K4 754 aa6.77□□□□□ -1.33
ABCF1-207ENST00000542772 M0R2N6 131 aa6.77□□□□□ -1.33
ABCF1-207ENST00000542772 STXBP3O00186 592 aa6.77□□□□□ -1.33
ABCF1-207ENST00000542772 PIK3CDO00329 1044 aa6.77□□□□□ -1.33
ABCF1-207ENST00000542772 MEIS2O14770 477 aa6.77□□□□□ -1.33
ABCF1-207ENST00000542772 PEX10O60683 326 aa6.77□□□□□ -1.33
ABCF1-207ENST00000542772 TRPA1O75762 1119 aa6.77□□□□□ -1.33
ABCF1-207ENST00000542772 TBC1D8O95759 1140 aa6.77□□□□□ -1.33
ABCF1-207ENST00000542772 GJB2P29033 226 aa6.77□□□□□ -1.33
ABCF1-207ENST00000542772 DDIT3P35638 169 aa6.77□□□□□ -1.33
ABCF1-207ENST00000542772 CLK2P49760 499 aaKnown RBP6.77□□□□□ -1.33
ABCF1-207ENST00000542772 CCNA1P78396 465 aa6.77□□□□□ -1.33
ABCF1-207ENST00000542772 GRM1Q13255 1194 aa6.77□□□□□ -1.33
ABCF1-207ENST00000542772 NPY5RQ15761 445 aa6.77□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 137 ms