RNA–Protein interactions for RNA: ENST00000539409.5

FAM60A-206, Transcript of Protein FAM60A, humanhuman

TSL 1 (best) BASIC

Gene FAM60A, Length 2,532 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM60A-206ENST00000539409 MKRN3Q13064 507 aaKnown RBP13.16□□□□□ -0.3
FAM60A-206ENST00000539409 NPY5RQ15761 445 aa13.16□□□□□ -0.3
FAM60A-206ENST00000539409 MS4A4AQ96JQ5 239 aa13.16□□□□□ -0.3
FAM60A-206ENST00000539409 AGTPBP1Q9UPW5 1226 aa13.16□□□□□ -0.3
FAM60A-206ENST00000539409 A0A0G2JMZ2 1700 aa13.16□□□□□ -0.3
FAM60A-206ENST00000539409 FASTKD5Q7L8L6 764 aaKnown RBP13.16□□□□□ -0.3
FAM60A-206ENST00000539409 RASAL3Q86YV0 1011 aa13.16□□□□□ -0.3
FAM60A-206ENST00000539409 FAM177A1Q8N128 213 aaPredicted RBP13.16□□□□□ -0.3
FAM60A-206ENST00000539409 TNPO1Q92973 898 aaKnown RBP13.16□□□□□ -0.3
FAM60A-206ENST00000539409 COA7Q96BR5 231 aa13.16□□□□□ -0.3
FAM60A-206ENST00000539409 COL11A1P12107 1806 aaPredicted RBP13.16□□□□□ -0.3
FAM60A-206ENST00000539409 HOXA7P31268 230 aaPredicted RBP13.15□□□□□ -0.3
FAM60A-206ENST00000539409 NAPAP54920 295 aa13.15□□□□□ -0.3
FAM60A-206ENST00000539409 KIF23Q02241 960 aaPredicted RBP13.15□□□□□ -0.3
FAM60A-206ENST00000539409 RESTQ13127 1097 aa13.15□□□□□ -0.3
FAM60A-206ENST00000539409 GPAT2Q6NUI2 795 aa13.15□□□□□ -0.3
FAM60A-206ENST00000539409 CCDC148Q8NFR7 591 aa13.15□□□□□ -0.3
FAM60A-206ENST00000539409 ATG4CQ96DT6 458 aa13.15□□□□□ -0.3
FAM60A-206ENST00000539409 AMNQ9BXJ7 453 aa13.15□□□□□ -0.3
FAM60A-206ENST00000539409 SLC38A10Q9HBR0 1119 aa13.15□□□□□ -0.3
FAM60A-206ENST00000539409 TMEM88BA6NKF7 163 aa13.15□□□□□ -0.3
FAM60A-206ENST00000539409 KIF28PB7ZC32 967 aa13.15□□□□□ -0.3
FAM60A-206ENST00000539409 ZNF157P51786 506 aaPredicted RBP13.15□□□□□ -0.3
FAM60A-206ENST00000539409 GTF2A2P52657 109 aa13.15□□□□□ -0.3
FAM60A-206ENST00000539409 COG2Q14746 738 aa13.15□□□□□ -0.3
FAM60A-206ENST00000539409 MCTP1Q6DN14 999 aa13.15□□□□□ -0.3
FAM60A-206ENST00000539409 RGMBQ6NW40 437 aa13.15□□□□□ -0.3
FAM60A-206ENST00000539409 PPP1R18Q6NYC8 613 aa13.15□□□□□ -0.3
FAM60A-206ENST00000539409 CCDC174Q6PII3 467 aa13.15□□□□□ -0.3
FAM60A-206ENST00000539409 DIS3L2Q8IYB7 885 aaKnown RBP13.15□□□□□ -0.3
FAM60A-206ENST00000539409 ADAMTS5Q9UNA0 930 aa13.15□□□□□ -0.3
FAM60A-206ENST00000539409 ZNF536O15090 1300 aa13.15□□□□□ -0.3
FAM60A-206ENST00000539409 MYPNQ86TC9 1320 aa13.15□□□□□ -0.3
FAM60A-206ENST00000539409 SPDYE16A6NNV3 312 aaPredicted RBP13.14□□□□□ -0.31
FAM60A-206ENST00000539409 VWA5AO00534 786 aa13.14□□□□□ -0.31
FAM60A-206ENST00000539409 CETPP11597 493 aa13.14□□□□□ -0.31
FAM60A-206ENST00000539409 TAL1P17542 331 aaPredicted RBP13.14□□□□□ -0.31
FAM60A-206ENST00000539409 DSG3P32926 999 aa13.14□□□□□ -0.31
FAM60A-206ENST00000539409 NLRP5P59047 1200 aa13.14□□□□□ -0.31
FAM60A-206ENST00000539409 FBXO11Q86XK2 927 aa13.14□□□□□ -0.31
FAM60A-206ENST00000539409 OXER1Q8TDS5 423 aa13.14□□□□□ -0.31
FAM60A-206ENST00000539409 CCDC12Q8WUD4 166 aaPredicted RBP13.14□□□□□ -0.31
FAM60A-206ENST00000539409 ZMYND12Q9H0C1 365 aa13.14□□□□□ -0.31
FAM60A-206ENST00000539409 ABT1Q9ULW3 272 aaKnown RBP13.14□□□□□ -0.31
FAM60A-206ENST00000539409 PCDHA1Q9Y5I3 950 aa13.14□□□□□ -0.31
FAM60A-206ENST00000539409 MYH15Q9Y2K3 1946 aa13.14□□□□□ -0.31
FAM60A-206ENST00000539409 ESYT2A0FGR8 921 aa13.14□□□□□ -0.31
FAM60A-206ENST00000539409 ADAMTS3O15072 1205 aa13.14□□□□□ -0.31
FAM60A-206ENST00000539409 SAFBQ15424 915 aaKnown RBP eCLIP13.14□□□□□ -0.31
FAM60A-206ENST00000539409 USH1GQ495M9 461 aa13.14□□□□□ -0.31
FAM60A-206ENST00000539409 BRI3BPQ8WY22 251 aa13.14□□□□□ -0.31
FAM60A-206ENST00000539409 SMCHD1A6NHR9 2005 aa13.14□□□□□ -0.31
FAM60A-206ENST00000539409 CCL15-CCL14A0A0B4J2E2 113 aa13.13□□□□□ -0.31
FAM60A-206ENST00000539409 BTBD18B2RXH4 712 aa13.13□□□□□ -0.31
FAM60A-206ENST00000539409 ICAM1P05362 532 aa13.13□□□□□ -0.31
FAM60A-206ENST00000539409 U2AF2P26368 475 aaKnown RBP eCLIP13.13□□□□□ -0.313e-6■□□□□ 10.1
FAM60A-206ENST00000539409 CALML3P27482 149 aa13.13□□□□□ -0.31
FAM60A-206ENST00000539409 KRT2P35908 639 aa13.13□□□□□ -0.31
FAM60A-206ENST00000539409 NR5A1Q13285 461 aa13.13□□□□□ -0.31
FAM60A-206ENST00000539409 CCL15Q16663 113 aa13.13□□□□□ -0.31
FAM60A-206ENST00000539409 REPS2Q8NFH8 660 aa13.13□□□□□ -0.31
FAM60A-206ENST00000539409 ASCC2Q9H1I8 757 aaPredicted RBP13.13□□□□□ -0.31
FAM60A-206ENST00000539409 ZSCAN16Q9H4T2 348 aaPredicted RBP13.13□□□□□ -0.31
FAM60A-206ENST00000539409 PCDHA4Q9UN74 947 aa13.13□□□□□ -0.31
FAM60A-206ENST00000539409 SLC10A3P09131 477 aa13.13□□□□□ -0.31
FAM60A-206ENST00000539409 FDX1P10109 184 aa13.13□□□□□ -0.31
FAM60A-206ENST00000539409 GALNT17Q6IS24 598 aa13.13□□□□□ -0.31
FAM60A-206ENST00000539409 DAGLBQ8NCG7 672 aa13.13□□□□□ -0.31
FAM60A-206ENST00000539409 CHAMP1Q96JM3 812 aa13.13□□□□□ -0.31
FAM60A-206ENST00000539409 FOXP1Q9H334 677 aaPredicted RBP13.13□□□□□ -0.31
FAM60A-206ENST00000539409 HOXC10Q9NYD6 342 aa13.13□□□□□ -0.31
FAM60A-206ENST00000539409 SMCO2A6NFE2 343 aa13.12□□□□□ -0.31
FAM60A-206ENST00000539409 ZBED4O75132 1171 aa13.12□□□□□ -0.31
FAM60A-206ENST00000539409 IRX3P78415 501 aaPredicted RBP13.12□□□□□ -0.31
FAM60A-206ENST00000539409 FAM173BQ6P4H8 233 aa13.12□□□□□ -0.31
FAM60A-206ENST00000539409 POTEEQ6S8J3 1075 aa13.12□□□□□ -0.31
FAM60A-206ENST00000539409 TNFRSF25Q93038 417 aa13.12□□□□□ -0.31
FAM60A-206ENST00000539409 HHIPL1Q96JK4 782 aa13.12□□□□□ -0.31
FAM60A-206ENST00000539409 AGBL1Q96MI9 1066 aa13.12□□□□□ -0.31
FAM60A-206ENST00000539409 BRMS1Q9HCU9 246 aa13.12□□□□□ -0.31
FAM60A-206ENST00000539409 FAM155AB1AL88 458 aaPredicted RBP13.12□□□□□ -0.31
FAM60A-206ENST00000539409 BTBD19C9JJ37 291 aa13.12□□□□□ -0.31
FAM60A-206ENST00000539409 M0R2N6 131 aa13.12□□□□□ -0.31
FAM60A-206ENST00000539409 OPLAHO14841 1288 aa13.12□□□□□ -0.31
FAM60A-206ENST00000539409 ADCY7P51828 1080 aa13.12□□□□□ -0.31
FAM60A-206ENST00000539409 PABPC4Q13310 644 aaKnown RBP eCLIP13.12□□□□□ -0.31
FAM60A-206ENST00000539409 FOXD4L6Q3SYB3 417 aaPredicted RBP13.12□□□□□ -0.31
FAM60A-206ENST00000539409 FOXD4L3Q6VB84 417 aaPredicted RBP13.12□□□□□ -0.31
FAM60A-206ENST00000539409 BRAPQ7Z569 592 aa13.12□□□□□ -0.31
FAM60A-206ENST00000539409 NOSTRINQ8IVI9 506 aa13.12□□□□□ -0.31
FAM60A-206ENST00000539409 BLIDQ8IZY5 108 aa13.12□□□□□ -0.31
FAM60A-206ENST00000539409 RAVER2Q9HCJ3 691 aaKnown RBP13.12□□□□□ -0.31
FAM60A-206ENST00000539409 C6orf50Q9HD87 102 aa13.12□□□□□ -0.31
FAM60A-206ENST00000539409 ZNF214Q9UL59 606 aaPredicted RBP13.12□□□□□ -0.31
FAM60A-206ENST00000539409 CCPG1Q9ULG6 757 aa13.12□□□□□ -0.31
FAM60A-206ENST00000539409 RBBP6Q7Z6E9 1792 aaKnown RBP13.12□□□□□ -0.31
FAM60A-206ENST00000539409 GNA11P29992 359 aa13.11□□□□□ -0.31
FAM60A-206ENST00000539409 TRAF1Q13077 416 aa13.11□□□□□ -0.31
FAM60A-206ENST00000539409 GNL2Q13823 731 aaKnown RBP13.11□□□□□ -0.31
FAM60A-206ENST00000539409 TMEM132BQ14DG7 1078 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms